Oncorhynchus tshawytscha (Chinook salmon): 112242153
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Entry
112242153 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: mucin-2
KO
K22023
mucin-6/19
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112242153
Membrane trafficking [BR:
otw04131
]
Others
Mucins
Secretory mucins
112242153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
C8
TIL
VWF
VWC
Motif
Other DBs
NCBI-GeneID:
112242153
NCBI-ProteinID:
XP_042183563
LinkDB
All DBs
Position
LG01:complement(5601409..5639999)
Genome browser
AA seq
2337 aa
AA seq
DB search
MGWTTLWLCVLALPLTSAIQVKARKARQSNHVNSICSTWGREHFKTFDGDVYQFPGTCEY
NLASDCHSESYQEFSVHLKRNEATEAEGNPTVKHVVVTINDLVFHLTKTQVAVNGEIVTL
PYYNGGVQLERNAVYTKLYSKVGLVVMWNGEDAVMVELDTEYTNRTCGLCGDFNGLPVHN
EFVHNGRKVSPIEFGNRQKVHRPNEVCEDPYEEEEEDEPADVQPKEDTCKEFHAQCDQLL
RSPLWSSCGAVVNAEPYIQACVQDLCGCSNTSDSFCVCSTLSEYSRQCSHAGGQPPHWRT
TAFCEKQCPFNMVYLESGSPCMDTCTHSDTSSLCEEHLMDGCFCPHGTVFDDISKRGCVT
QDQCQCKHDKVYNSGEVFRQDREECVCHHGQWSCKSLPSPATCAVEEGSHVTTFDGKAFT
FHGDCYYPLAKVESKDEVSPKFTVLVQLVPCIRQKFDTCLKSVVVLLNNDRNNALVITAD
GKVSHNAQITLPYNTADISVFKPSSFHMMLQTSFGLQVQIQLVPIMQVYVTLDESYKTKT
QGLCGNFNKVLSDDMKTPQGMVEGTASSFGNSWKANPTCRDREERLDDPCSLSVENENYA
KHWCSMLRSSDSTFAKCHAMVDPELYYKRCTYASCNCEKSEDCLCAVFSSYVRDCATKGV
VLSGWRENVCDKYIGNCPASQTYSDQLQRCQLTCSSLASKSQGCTNDFLPVDGCSCPDGL
YMDDRGTCVPMDKCPCFHNGVHIKPGKSINIQEEHCVCNNGKLHCRSWKMRSESTCQSPK
VFVNCSNDLGVQCTRSCRNPDFMDCFSAECESGCKCPTSLWEDGKGMCVNKHECPCSHDG
FLYAPGKQIPNGCNTCTCKSGKWECTDKKCPGTCTIYGSGHYKTFDERTYGFQGKCGYVA
VQNKCGNRPVQDKFMVITENIPCGTTGTTCSKSVRVQLGRTELKLSKGTHEVVDLEVGSQ
IQYRVRTVGLYLIVESDIGIAVLWDRKTTVRIVLEPQHSGAVCGLCGNYNGEGRDDFTTQ
GQMIVSSPVEFANSWKVSSTCPDAESNVDPCGARPNRHNWAKMQCSIITGKTFQLCHKKV
DPSLYFENCVKDSCACDTGGDCECFCTAVAAYAQACTEAGVCVAWRTPEICPVFCDYYND
PGECEWHYSPCHTPCFKTCLNPNGTCDNPLPNLEGCYPQCPPDRPIFDEETGECVEECPP
TGPSTTTPQATTPTPTTTQWTPTTTTLTTEPPTTTPIMTPLPPTTTTPIPPPTTTPTPST
TPTPSTTPIQTTTTPTTTTPIPPTTTTPIPPTPSTTPIQTTTTPPTTTTPIPPTTTTPIP
PTPSTTPIQTTTTTPIPTTPSTTPIPTTTTTTPIPPTPSTTPIQTTTTTTTPTTTPIPPT
TTTPIPPTPSTTPIQTTTTPPTTTPTTTPIPPTPSTTPIPTTTTTPIPTTTTLPPTTTTP
LPPTTTTPKPPTTTEAITLTTTPTTTEEPTTTPRTTEKPTTTPTTTEEPTTTPTTTEEST
TTPRTTEKPTTTTPVIDTTTTKAPTTTPKPPTTTEATTPMTTTSPTTHESVVTGPPITPE
HQVSSIPTTTGSPTPPPITCPEWDKVQNETFWLCNCTLARCIENNTIEIIPYECPEPEPI
TCTNGKKPVLQWDEFYCCQRFVCDCVCEGWGDPHYITFDGLFYSFQGNCTYVLMEEMLPR
HHFKIYIDNVNCDPTEDVSCPRSIIVSYRSTVITLKNHNLIGAAQLEALIDGVXLRLPFT
RHGVKVMSSGINMVLEIAHLQVVVTFGVTGFSVNLPWQHFGNNTQGHCGTCSNNQADDCM
LPGGQLVENCAVMADYWPAKDLYQPECHVPPGIPTNSPLPEPTQKPCKPDSSVCDLLKDS
IFAACHPFVSPDNFYKGCVYDSCHVSNPAVECTSLQTYAAACAQFGVCIYWRNHTELCAS
DCPADKVYKPCGPAEQPTCDDNPDESRMNFTTEGCFCPDGMKLFNKDSGICVDKCGCIDP
EGVPREFNERFEYKCQDCVCLESTKTVNCKPKVCSKPPVELCTGPGFVYVNQTDPSDPCC
SNLACRCDSSTCPPTNMNCPIGFVPVVSVPEGKCCPEHTCEPKRVCLHKGVEYLPNSKVP
GSECQECTCTNKVDPKSGHYQIDCGFMQCDEDCEKGYEYQEPNYSSDDCCGKCVQTHCVL
QINGTKQLLKHGDTWSAPGDKCQQYSCVKNGDSYLTQSSNIHCPPFQQANCQPGSIQTAA
NGCCRICVEKDKACKVGSMKSFINHKSCQSVEEVEMPYCEGSCNTFTKYSAMAASLDHSC
ACCQESRSSNRTVDLRCLNGDVVPYTYLHVEECSCRHSDCNRAIRVPARRTRSNTLV
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atggggtggacaactctgtggttgtgtgttctcgctctgccactaacgagcgccatccag
gtgaaagccaggaaagcgcgccagtccaaccatgtgaacagcatctgcagcacctggggc
agagagcacttcaagaccttcgatggagacgtgtaccagttcccagggacgtgtgaatac
aacctggcctccgactgccactctgagtcctaccaggagttctctgtgcacctgaagagg
aacgaggctactgaggctgaggggaaccctacggtcaaacacgtagtggtcactatcaac
gacctggtcttccacctgaccaagactcaagtcgcggtcaatggagaaattgtaactctg
ccgtactacaatggaggagtccaactggagaggaatgcagtttacaccaaactctactcc
aaggttggcctggttgtcatgtggaacggagaagatgccgtcatggtggagctggacacg
gagtataccaaccgtacctgtggtctctgtggagacttcaatggccttccagtccacaat
gagtttgttcataacggtcgtaaagtgagccccattgagtttggaaacagacagaaggtc
cacaggcccaacgaggtttgtgaagacccctatgaagaggaagaggaagatgaacctgca
gacgttcagcctaaagaggacacatgcaaggagtttcatgcccagtgtgaccagctcctg
cgctcaccattgtggagctcctgtggtgcggtcgtgaacgctgagccctacatccaggcc
tgtgttcaggacctgtgtggctgcagcaacacttctgatagcttctgtgtctgcagcacc
ctgtcagagtactccagacagtgctcccacgccgggggacagccaccccactggagaaca
acagccttctgtgagaagcagtgtccgttcaacatggtctatctggagagtggctctccc
tgcatggatacctgtacccactcagacaccagctcactgtgtgaagaacacctgatggac
ggctgcttctgccctcacgggactgtgtttgatgacatctcaaagagggggtgtgtcact
caggaccagtgtcagtgcaaacacgacaaagtttacaactctggagaagtattcagacag
gaccgtgaggaatgtgtctgtcatcatggtcagtggtcctgtaaaagtctacccagccct
gctacatgtgccgttgaggagggttcacacgtgacgaccttcgatgggaaagcgttcacc
ttccatggggactgttactaccccttagccaaggtggaaagcaaggatgaagtcagtcca
aagttcactgtactggtccagctggttccctgtataagacagaagtttgacacttgcctc
aagagtgttgtggtcttgctaaacaatgatagaaacaacgctttggtgattaccgccgat
gggaaagtcagccacaatgcacagatcactctgccttacaacacagctgacatcagtgtg
ttcaagccgtcgtccttccacatgatgctccagaccagctttgggctgcaggttcagatc
cagctggtccctatcatgcaggtctatgtcaccctggacgagagctacaagaccaagaca
caaggtctgtgtgggaacttcaacaaggtgctgtctgatgacatgaagaccccccagggt
atggtggagggaacagcctcttcatttgggaactcctggaaggctaatcctacctgcaga
gacagagaggagaggctggacgacccctgttccctcagcgtggagaatgagaactatgct
aaacattggtgctccatgctaagaagttctgacagcacctttgccaagtgccatgccatg
gtggaccccgagctttactacaagcgatgcacgtacgctagctgcaactgtgagaagagt
gaagactgcctgtgtgctgtcttctcctcttatgtgcgagactgtgctaccaagggagtg
gtcctgtcgggctggagagagaacgtgtgtgacaaatacattggtaactgcccagcgtct
caaacctactctgaccagctccagagatgtcagctgacctgtagctccctggccagcaaa
agccagggttgtaccaacgacttcctccccgtggatggttgttcttgcccggacggactt
tacatggatgacaggggcacctgtgtacccatggacaaatgcccctgcttccacaacggg
gtccacatcaagcctgggaagtccatcaacattcaggaggaacactgtgtctgcaacaat
gggaagcttcactgccgttcctggaagatgcgttcagagagtacctgccagtcgccgaag
gtgttcgtgaactgctccaatgacctgggagtacagtgtacacggagctgtaggaacccg
gatttcatggactgtttctccgcagagtgtgagtctgggtgcaagtgtcccacgagtctg
tgggaggatgggaaaggcatgtgtgtgaataaacatgaatgcccatgcagccatgacgga
ttcctctacgccccaggaaaacagatcccaaacggatgtaacacttgcacctgtaagagt
gggaaatgggagtgcacagataagaagtgcccaggaacctgtaccatctacggcagtggc
cattacaaaacctttgatgagcgcacgtatggcttccaaggaaaatgtggctatgtggct
gtccagaacaaatgtgggaaccggcctgtccaggacaaattcatggtgatcacagagaac
ataccgtgtggaaccacaggcaccacttgctccaagtctgtcagggttcaactggggaga
acagagctgaagctatcaaagggaacccatgaagtggtggacctagaagtgggctctcag
atccagtaccgagtgaggacagtcggtctgtacctgattgttgagtcagacatcgggatc
gcagtgctgtgggaccgtaaaactaccgtccgcatcgtcctggagccacagcatagtgga
gcagtgtgcggcctgtgtgggaactataatggagaaggcagagatgacttcaccacacaa
ggtcagatgatagtcagcagccctgtggagtttgctaacagctggaaagtgtcaagcact
tgtcccgatgcagaaagcaacgtggacccatgtggagccagacccaaccgtcacaactgg
gctaagatgcagtgcagcatcatcaccggaaagactttccaactgtgtcacaagaaggta
gaccctagtctgtactttgagaactgtgtgaaagactcctgtgcctgtgatactggcgga
gactgtgagtgtttctgtacagctgtagcagcctacgcccaggcctgcaccgaagctgga
gtctgtgttgcatggagaacaccagaaatttgtcctgtgttctgtgactactacaacgat
ccaggtgaatgtgaatggcattacagcccttgccacacaccttgcttcaagacctgtctg
aatccaaatgggacctgtgacaaccctcttcccaatctggaaggttgttacccacaatgc
cctccagataggccaatatttgatgaagagaccggggagtgtgttgaggaatgcccacca
acaggcccatcaacaacaaccccccaggcaaccacaccaacaccaacaacaacacagtgg
acaccaacaactaccacattgacaacagaacctccaacaacaacaccaataatgacacca
ctaccaccaacaacaacaacaccaataccaccaccaacaacaacaccaacaccatcaaca
acaccaacaccatcaacaacaccaatacaaacaacaacaacaccaacaacaacaactcca
attccaccaacaacaacaacaccaataccaccaacaccatcaacaacaccaatacaaaca
acaacaacaccaccaacaacaacaactccaattccaccaacaacaacaacaccaatacca
ccaacaccatcaacaacaccaatacaaacaacaacaaccacaccaattccaacaacacca
tcaacaacaccaataccaacaacaacaacaacaacaccaataccaccaacaccatcaaca
acaccaatacaaacaacaacaacaacaacaacaccaacaacaactccaattccaccaaca
acaacaacaccaataccaccaacaccatcaacaacaccaatacaaacaacaacaacacca
ccaacaacaacaccaacaaccacaccaattccaccaacaccatcaacaacaccaatacca
acaacaacaacaacaccaataccaacaacaacaacactaccaccaacaactaccacacca
ttaccaccaacaacaaccacacctaaaccaccaactacaacagaagccataactctaacc
acaaccccaacgacaacagaagaaccaaccacaacccccaggacaactgaaaaaccaacc
acaaccccaacgacaacagaagaaccaaccacaaccccaacaacaacagaagaatcaacc
acaacccccaggacaactgaaaaaccaaccacaaccacccctgtcatagataccacaacc
actaaagctcctacaacaacacctaaaccaccaactacaacagaagccacaactccaatg
acaaccacatcaccaacaacccatgaatcggttgtcactggtcctccaataacaccagaa
catcaagtcagttcaataccaaccacaactgggtcaccaacccctccaccaatcacttgt
cctgagtgggacaaagtgcaaaatgaaactttctggctctgcaactgcactttggccaga
tgcattgaaaacaacaccattgagataattccgtatgaatgcccagagcctgagccaatc
acatgtaccaatggcaagaaaccagtgctacaatgggatgagttctactgctgccaacga
ttcgtgtgtgactgcgtctgtgagggttggggagacccccattacatcaccttcgacggg
ctcttctacagcttccaagggaactgtacctatgtgctgatggaggagatgttgccgcgt
caccacttcaagatctacatcgacaatgtcaactgtgatcccaccgaagacgtgtcttgt
cctcgatccatcatcgtgtcctaccgctcaacagttataacactgaagaatcacaacctc
attggagctgctcagttggaggctcttattgatggagttntcctgagactacccttcacg
cggcacggtgtgaaggtgatgagctctggtatcaacatggtcttggagatagcacacctc
caggtggtagttacctttggagtcactggcttcagcgtcaaccttccttggcaacacttt
ggcaacaatacacagggtcattgtggaacatgtagcaacaaccaggctgatgactgcatg
ttgcctggaggtcagctggtggagaactgtgctgtgatggcagactactggccagccaag
gacctctaccaacctgaatgccatgtgccacctggaatccccaccaactctcctctccct
gaacccacacagaagccatgcaagccagactcctctgtctgtgatctcctgaaggacagc
atttttgcagcctgtcatccatttgtctcacctgacaacttctacaagggctgtgtctat
gacagctgccatgtgtccaacccagcggtggagtgcaccagtctgcagacatacgctgct
gcctgtgcccagttcggagtatgcatctactggagaaaccacaccgagctctgtgccagc
gactgtccagctgacaaagtctacaagccctgcggtcctgcagaacagccaacctgtgat
gacaatccagacgagtctaggatgaacttcaccacagaaggctgcttctgtcctgatggg
atgaaactcttcaacaaggactcagggatctgtgttgataagtgtggatgcattgacccc
gaaggagttccacgagagttcaacgagaggtttgagtacaagtgccaggactgcgtttgt
ttggaatccaccaagactgtgaactgtaaacccaaggtctgctccaaaccaccagtagag
ttatgcactggaccaggctttgtatatgtcaaccaaaccgatccatccgatccatgctgc
tccaacctcgcctgccgttgtgacagcagcacttgcccacctaccaacatgaactgtcct
attgggttcgtgccagtggtttcagtccctgaggggaaatgctgtccagagcacacatgt
gagcctaaaagagtttgtcttcacaaaggcgttgaatacctgcccaattctaaagtaccg
ggatcagagtgccaggagtgcacctgcaccaacaaagtggaccccaagtctggtcattac
caaattgactgtggattcatgcaatgtgacgaagattgtgaaaagggatatgagtaccag
gagccaaactactcctcagatgactgctgtggtaaatgtgttcagacccactgtgtcctc
cagatcaatgggaccaagcagttgttgaagcatggagatacatggtctgctcctggtgac
aagtgccagcagtacagctgtgtgaaaaacggtgatagttatctgacccagagctccaac
atccattgcccgcccttccagcaggccaactgccagcctggttcaattcagaccgctgca
aacggctgctgtagaatttgtgtggagaaggacaaggcctgtaaggtaggatccatgaag
agtttcatcaaccacaagagctgccagtctgttgaggaggtggagatgccgtactgtgag
ggatcctgcaacaccttcaccaagtactctgccatggctgcgtctctggaccactcctgt
gcctgttgccaggagtcccggtccagtaaccgcacggtggacctacggtgtctgaatgga
gatgtggtgccctacacctacctacacgtggaggagtgtagctgcagacacagcgactgc
aacagggccattagggtgcctgcccgcaggacacgcagcaacacactggtgtaa
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integrated database retrieval system
