Oncorhynchus tshawytscha (Chinook salmon): 112242265
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Entry
112242265 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: tuberin
KO
K07207
tuberous sclerosis 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04115
p53 signaling pathway
otw04140
Autophagy - animal
otw04150
mTOR signaling pathway
otw04218
Cellular senescence
otw04910
Insulin signaling pathway
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112242265
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112242265
09143 Cell growth and death
04115 p53 signaling pathway
112242265
04218 Cellular senescence
112242265
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112242265
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112242265
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112242265
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112242265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
112242265
NCBI-ProteinID:
XP_042172006
LinkDB
All DBs
Position
Unknown
AA seq
1955 aa
AA seq
DB search
MNKQPSKESLKDKVKGIFGLGSPRPPNKQTESKPSEFIITLDILKELHPDCGLSNRIRVA
NHVSDLAKAKKFEEHAVEAVWKAVEDMLTPEQPPEARHAVLLLLRAVIQGQGERLGPLRA
FFFKVIRDYQPSNEDLSDRLEVFKALTENGKDITYLEEDIAGFVLLWMDIGLTADFLHVL
VNLVKFNSCYLDQNVSVMVQKICLLCNRTTASTDIEMALQVLDAVVCYNCLPSDSLTVFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERAYMEDSPLLRGAVFFVG
MALWGAHRLPALKNTPTLVLPSFYKAMWCANEMVSYEIVLSITRLIKKYGKELQVVTWDI
LLGIIERLLQQIQSIGSAELKSIVFELLTTVEELYEQNGFHGSSDKFFSLVEKCADKRPD
ASVLTLISYRAQSIQPAKDGWIQNLHRLMEKFFRNESRGVIRIKVLHILSFVLSTNRQLY
EEELIEVVVVPQLSGIAEDRDLAVRRQATQLLVDLAESCSTHHFTSLLDIIQRVASRSLV
CPGPLEVSERDPTAESPMEDVRTAIRGLLEILQSKLYSLPASHASRVYELLIGHLQLHYK
SKYSSAVACSIRLQVFDFLLMMRTDSLHRLGFLSKDGVLRFSPYCHCDMGEPEKRGSEKK
PAGSVSPPAGSPAPSSSSSTTTTPSSSSTTTTTPSSSIRTACLPYSPAFNVLLQCLKMET
DWKVLKLVLDKMPWTLQYKVLLLSSPCSIDQLCSTLCSMVTDRLISERLKKTPDGFSRTD
VQLAVVPVLTAITSYHNYLEQARQRELVQCLEAGLIYRCAKQCVVALTMCTVEMPDIMIK
LLPALIVKLTHISATVAMASPMLEFLSTLVRLPHLYAYFVAEQYVSVFAISLPYTNPSKF
NQYIVSLAHHVISMWFIRCRLTFRKDFVQYITKGLRSNALMPFDDTQDTQSSFRARSTSL
NERPKSLRAAKMAKAHQQQQASMAAGVAASTGSPVKELRDLSAFRSRSISVSEHAVRRMH
TSSTTCSLGSSDENTVSQADDGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLL
AGGRSMTWLVGNKLITITTSGGVRSQALLGMDMAERLGGGGEMTRSDPSLHTRQTKEAPA
KLESQSSQQLNRASRIRVRSMSGGHALRAGPAQSLSPLVSPSEGGELCGVPLSPPSSSSG
PCLDGLEPPSPSPCPPKDPLKDKPSLAEFLPVLTQGWAEIFIRRPSGNTSWLMCLENPPS
PFSSELGNMPLQELSSVLMAMEGVKEPPTQTASAPASTATPAPTPVALNPPGLIQGGKPG
LIQRSNTVGSLSSLGLSFAPPPVPVRLQRSISWADSVVVLEGTGVRGHVDYPSDWPEAEK
FEAMPSEPIYIAADKFIKALPPRTLSRSSSSSSQEDEKSTLEEVSEGFIPIDQPPLAPST
PGSQGPELPFQTQNQPETQTLNKSSSSPELQTLPEAFPKTTTGPGAGGGEAPGVRSPSEG
KSQPQQPPAEKEMEKVESGGGVNRQNQSGDTTPVTGGLSGTSGGGGVNRQNQSGDTTPVT
GGLSGTSGGGGGSSSSQGARMRLEFPAPHQPGPLSPSGGHRPRGHTISVSAPSSRRERIG
GDAYHTTRPGPTNTEKTSGLSPSFVFLQLYHSPFFGNEANKPLLLPKSQLIDRAVKVLDQ
MPPYDTHKIGVVFVGAGQVFNEVSILSNEYGSNRYAGFLTGLGKLIHLKDCDPDQIFLGG
LDQYGDDGEFTYCWHDDIMQAIFHIATLMPNRDSDKGCCNKKRHIGNDFVMVVYNDSGEE
YKLGTIKGQFNFVEVIIKPLDYGSNLVTLQCRKDLEGLVDTSVVKIVSDQNLPLLVRQMA
LHANMASLVHQYRANPSDAYASKWLARLRHIKRLRTRAQEEIQSRPTPGISLTQSHSSQT
KQSSYQQVSGGGSNTDSSGQRKRLVSTVDDFTDFV
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcagcccagtaaagagagtctgaaggacaaggttaaggggatatttggtttg
ggatctcctcgaccccccaacaagcagacagagagcaagccctcagagttcatcatcaca
ctggatatactcaaggagctgcaccctgactgtggccttagcaacagaatccgggttgct
aaccatgtctccgacctggccaaggccaagaagtttgaggagcatgcagtggaagccgta
tggaaggcggtggaggacatgctgactccagaacagccacctgaagctagacatgctgtc
ctgctgctcctcagagctgtcatacagggacagggtgagcgtctgggtcctctgcgggcc
ttcttcttcaaggtgatcagagactaccagccgtccaatgaggacctgtctgacaggctg
gaggtgttcaaggccctgacggagaacgggaaggacatcacgtacctggaggaggacata
gctgggtttgtcctgctgtggatggacattggtctgactgctgacttcctccacgtcctg
gtcaacctggtcaagttcaacagctgctacctcgaccagaacgtatccgtcatggtccag
aagatctgtctgctgtgtaaccggactacagcctctacagacattgagatggctctacag
gtgctggatgcggtggtgtgttataactgcctcccctctgactccctcaccgtcttcatc
atcactctctgtcgcaccgtcaacgtcaaggagttctgtgagtcctgctggaagttgatg
aggaaggtgttggggactcatctgggccatagtgccatatacaccatgtgccgtatcatg
gaggagagggcgtatatggaggattctccattgctgagaggagcagtgttctttgtaggg
atggctctatggggggcgcaccgtctcccagccttaaagaacacccctaccctggtcctc
ccatcattctataaggcgatgtggtgtgccaacgagatggtgtcgtatgagatcgttctg
tccatcaccagactgataaagaagtatggcaaggaactccaggtggtcacatgggacata
ctgctggggatcatagagaggttactacagcagattcagtcgataggcagtgcagagctg
aagtccatagtgtttgagttgctgactacagtggaggagctctatgagcagaacggcttc
catggatcatctgacaagttcttcagtctggtggagaagtgtgctgacaaaagacctgat
gcgtcggtgctgactctgatatcgtaccgggcccagtccatccagccagctaaagacggg
tggatccaaaacctacaccgccttatggagaagttcttcaggaatgagagtcgaggtgtg
atcaggatcaaagtgcttcacatcctctcctttgtcctcagcaccaaccgccagctctac
gaggaggagctgattgaggtggtggtggttcctcagctcagtgggatagcagaggacaga
gacctggctgtgaggagacaggctacccagctactggtggacctggctgagagctgtagt
acacaccacttcaccagcctcctggacatcattcagagggtggcgagtcgttcgctggtg
tgcccagggcccctggaggtgtcggagagagaccccacggcagaatcccccatggaggac
gtcaggacggctatacgaggcctactggagatactgcagagtaagctgtacagcctgcca
gccagccacgctagtcgagtgtacgagctgctgatcggacacctgcagctgcactacaag
agcaagtacagctccgctgtggcctgcagcatacgactacaggtgtttgacttcctcctg
atgatgagaactgactccctccatcgtctggggttcctcagtaaagacggggttctgagg
ttcagtccgtactgccactgtgacatgggggagccagagaaacgagggagtgagaagaag
cctgcaggctcagtgtctccccctgctggcagtcctgccccctcctcctcctcctccacc
accactactccctcctcctcctccaccaccaccactactccctcctcctccatccgtaca
gcctgcctgccctactcacctgcctttaatgtgctgctacagtgcctgaagatggagaca
gactggaaggtgttgaagctggtactagacaagatgccctggaccctgcagtataaagtc
ctgctgctgtcctctccctgcagcatagaccagctctgttctacactctgttctatggtg
acagaccgtcttatctcagagcgtctgaagaagactccagatggtttcagtcgtactgat
gtccagctggctgtagtacctgttctcactgctatcacatcataccacaactacctagaa
caggccagacagagggagttggttcagtgtctggaagcagggctgatataccgctgtgcc
aagcagtgtgtggttgccctgacaatgtgcaccgtggagatgcctgacatcatgattaaa
ctcctccccgccctcatcgtcaagctgacgcacatctcggcaaccgtcgccatggcgtcg
cccatgctggaattcctgtccactctggtgcggctgccacatctctatgcttactttgta
gcagagcagtatgtcagtgtgttcgccatctccctgccctacaccaacccctccaagttt
aaccagtacattgtgtcgttggctcaccatgtcatctccatgtggtttatccgctgccga
ctcaccttcagaaaggactttgtgcagtacatcaccaagggtctgcgctctaatgctctg
atgccgttcgatgacacccaggacactcagagcagcttccgtgctcgcagcaccagcctc
aatgagaggcccaagagcctacgggcagccaaaatggcgaaggcccaccagcagcagcag
gcgtcaatggcagcgggcgtagcggcgagtaccggctctcccgttaaagagctgagagat
ctgtcggccttccgctcccgaagcatcagcgtctccgagcacgcggtgcgcaggatgcac
acctccagcaccacgtgtagtctgggttcttctgacgagaacaccgtgagccaggcagac
gatgggttaaagaccgtccacctggagttaacggagacctgtctggacatgatggctcga
tacgtcttctccaacttctcagcgctgcccaagaggtctcctatagcagagttccttctg
gcggggggtcgcagtatgacctggctggtgggtaacaagctgatcaccataacgaccagc
ggtggggtcaggagtcaggccttactgggaatggacatggctgagaggctgggaggaggg
ggagagatgaccaggtcagacccctcccttcacacccgtcagaccaaagaggctccggcc
aaactggagtcccagtccagtcaacagctcaacagagcctcacgcatcagagtacgatcc
atgtcaggtggccatgccctccgtgcaggtccagcccagagcctcagccccctggtctca
ccctctgaggggggagagctgtgtggtgtccccctctctcccccctcctcctcctccggc
ccctgtctggatggcctggagcccccctctccttccccctgtccccctaaggaccccctc
aaagacaagcccagcctggcagagttcctgcccgttctgacccagggatgggccgagatc
ttcatacgcagaccctcaggtaacaccagctggttgatgtgtctggagaaccctcccagt
cccttctcctctgagctgggtaacatgcctctccaggagctgtcctctgtcctcatggcc
atggagggggtcaaggagccccccactcagactgccagcgcccccgccagcacagccacg
cccgccccgacccccgtagcccttaacccccctggactcatccaagggggcaagcctgga
ctcatccagcgctctaacacagtgggctctctctcctctctgggtctgtccttcgccccg
cccccagttccggttcggctccaacggagcatttcctgggcagactctgtggtagtgcta
gaggggacaggggtcaggggccacgtagactacccctctgattggccagaggcggagaag
tttgaggccatgccctccgaacccatctacatcgctgctgacaagttcatcaaggccctg
ccccctagaacactcagcaggtcgtcctccagttccagccaggaagatgagaagtccacc
ctggaggaggtgagtgaggggttcatccccatcgaccagccccccctggccccctccacc
ccgggcagccaaggcccagagctccccttccagacccagaaccagcctgagacccagacc
ctcaacaagtccagctcctcccctgagctccagaccctaccagaggccttccccaagacc
acaacaggacccggggccggaggaggagaggcacccggggttcggtccccctcggagggg
aagagccagccacaacagcccccggcagagaaagagatggagaaggtggagagtggagga
ggggtgaacagacagaatcagagtggggataccaccccagtgacaggggggttgtctggg
acatcgggaggaggaggggtgaacagacagaatcagagtggggataccaccccagtgaca
ggggggttgtctgggacatcgggaggaggaggaggttcctcttcctcgcagggagccagg
atgaggttggagttcccagcgccccaccagcctggacccctctcccccagcggagggcac
cgtcccaggggtcacaccatctcagtgtcggccccctcctccaggagagagaggatagga
ggagacgcgtaccacaccacccggcccggacccaccaacactgagaagaccagtggactc
agtcccagttttgtgttccttcagctctaccactctcccttctttggcaacgaggccaac
aagcctctcctgctgcccaagtctcagctgatcgacagagcggtgaaggttctggaccag
atgcctccgtacgatacccataagattggagtggtgtttgtcggagctggacaggtattc
aacgaggtgtccatcctgtccaatgagtatggttctaaccgctacgctggcttcctgacc
ggcctggggaagctgatccacctgaaggactgtgatccagaccagatcttcctggggggt
ctagaccagtatggagatgacggggagtttacctactgctggcacgatgacatcatgcag
gccatcttccacatagccaccctgatgcccaacagagacagtgataagggctgctgtaac
aagaagagacacattggaaacgactttgttatggtggtttacaacgactcgggagaggag
tacaaactggggaccatcaagggtcagtttaactttgttgaggtgatcattaagcctctg
gactacggaagtaacctggtcaccctgcagtgcaggaaagatctggagggtctagttgac
accagtgtagtgaagatcgtctcagaccaaaaccttccattgctggtacgacagatggcc
ctacacgctaacatggcatctctggtccaccagtacagagcaaacccttctgatgcctac
gcctccaagtggctggccagactacgacacatcaagagactccggacaagggcccaggag
gagatccagtctcgtcctacccccggtatctctctgacccagagccactcctcccagacc
aaacagtcctcctaccagcaggtcagcggaggaggctccaacacggactcctccggacag
aggaagagactggtctccaccgtggacgacttcaccgacttcgtctga
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integrated database retrieval system
