Oncorhynchus tshawytscha (Chinook salmon): 112242496
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Entry
112242496 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 10
KO
K13094
RNA-binding protein 5/10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112242496
Spliceosome [BR:
otw03041
]
Complex A
Other components
Complex A specific factors
112242496
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Gene cluster
GFIT
Motif
Pfam:
OCRE
RRM_1
DUF7066
Zn_ribbon_RanBP
Phage_holin_3_5
COG6_C
zf-C2H2_jaz
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
112242496
NCBI-ProteinID:
XP_042160269
LinkDB
All DBs
Position
LG22:complement(44699544..44763460)
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AA seq
745 aa
AA seq
DB search
MGCPVEERGGGGPDPSSSCIEHPVQMDYRPDLLDLNQRPSNIIMLRMLPPNATANEIRAQ
LQDQGIDPTEVMIRLMTNKSSGQSRGFAFVEFNHIQEACRWMETNQMVLSVLDQRVSMHY
SEPKPRANEDWLCNKCGVQNFKRREKCFKCGVPKSEAELKLPQLRELPLGGHQMDGAQGL
LPLPALYQPAAATSTALTKAGATNTQQPEVANDTLILRNLGPHTSLESILSTLSPFATLS
PSNVRLIKDKQTQLNRGFAFLQLSTIVEASQLLQILQALQPTLSINGKAISVEFAKGSKR
DVFLTDGSRVSAATAASTAIAAAQWSVTQKAQSLSSTSRHGVDVGLYHQGAAVTLGVCEE
EENLDYKAHTVVTVVSSEAVVSGVDGVQLSLGQSQAPLITTATTQQVEIVGKPQPPTPTH
PATPELHTSTNNTRSDVSTYQYEESSGFYYDPLTGLYYDPNSQYYYNRVTQQYMYWDGEK
QTYIPAPAQSTETVVAPGDNTAPSNPPSAALGGKEKKDKPKNKTAQQIAKNMERWAKSLN
RQKENVRSLSSSSSVTPVASMALSPGDTWAPGLGRLDDRRESASADAGYAVLEKKGALSE
RAQIILDQLRHTDHRERSPSQVQGLVPAYNGETDSEGEERGEKDERMTDWAKLACLLCRR
QFPNKEALIRHQQLSELHKQNLEQRSSQQEGGAAERREKGLPTEPPDPKKRKYSPLDGTA
GSSLGARMLQGGVKNGLLLRNMQVD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgggctgtcccgttgaggagcgtggtggagggggtccagatccctcctcttcctgtata
gagcacccagttcagatggactacagaccagacctcctggacctcaaccagagaccctcc
aacatcatcatgttacgcatgctgccacccaacgctactgccaacgagatccgtgcccag
cttcaggaccaggggattgacccaacagaggttatgattcgcctgatgacaaacaagtct
tcaggtcagagccgtggattcgccttcgtggagtttaatcacatacaggaggcctgccgc
tggatggagaccaatcagatggttctgtctgtcctagaccagagggtgtctatgcactac
agtgaacctaaaccacgggccaacgaggactggctctgtaacaagtgtggggttcagaac
ttcaagaggagagagaagtgcttcaagtgtggtgttcccaaatcagaggcagagctgaaa
ctgccccagctgagggagttacccctgggggggcatcagatggatggtgcccagggatta
ctgcccctccctgccctttaccagcctgctgctgccacctctactgcactcaccaaggct
ggggcaactaacacacaacagcctgaggtggccaacgacactctgatcctgaggaacctg
ggtccccatacctccctggagtccatcctgtccactctgtctcccttcgctactctgtct
ccttctaatgttcgactgatcaaagataagcagacacaactcaaccggggcttcgctttc
ctacagctgtctactatagtggaagcatctcagctgctccagatcctgcaggcattacag
ccaactctctctataaacgggaaggccatctctgtcgagttcgccaaaggatccaaacgg
gatgtgtttctgactgatggtagtagagtgagtgctgctacagctgccagtacagccatc
gctgccgcccagtggtctgttacccagaaggcccagtccctgtcctctacctcccggcat
ggtgtggatgtggggttgtaccaccagggggcagcagtaaccctgggagtctgtgaagaa
gaggagaacctggactacaaggcccatacagtggtaacagtggtctcgtctgaggctgtg
gtttctggagtggacggcgtacaactgtctttgggacaatcacaagctccgctcatcact
acggcaaccacacagcaggtagagatagtgggtaagcctcagcctcctactcccacccac
cctgccaccccggaactgcacacgagtaccaacaatacccggtccgacgtgtccacctac
cagtacgaggagagttctggcttctactacgaccctctaactggactctactacgacccc
aattcacagtactactataacagggtcactcagcagtatatgtactgggacggagagaag
cagacatatattccagctcccgcccaatcaactgagactgttgttgcccctggtgataac
accgccccctctaaccccccctctgctgccctcgggggcaaggagaagaaagacaagccc
aaaaacaagacagcacaacagatagcgaagaacatggagcgttgggctaagagtctgaac
agacagaaggagaacgttcgctctctctcctcttcctcctccgtgacccctgtggcctct
atggctctttcccctggtgacacctgggctcctggactcggtcgccttgacgaccgcaga
gagtccgccagcgcagacgccggatatgctgtcctggagaagaagggggcgttatctgaa
agagctcagatcatcctggaccagctcagacacacagaccacagagagcgctccccttct
caggtgcagggtttggtgccggcctacaatggagagacggacagcgagggagaggaacga
ggagagaaggatgagaggatgacagactgggctaagctagcctgtctgctgtgtaggaga
cagttccccaacaaggaggctctcatacgacaccagcagctctcagagctacacaagcaa
aacctggaacagaggtcatctcagcaggaggggggagctgcggagaggagggagaaaggt
cttcccaccgaaccaccagaccccaagaagaggaagtacagcccccttgatggtacggct
ggcagtagtctaggtgccaggatgctgcagggaggggtgaagaatggcctgctgctacgt
aacatgcaagtggactga
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