Oncorhynchus tshawytscha (Chinook salmon): 112242721
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Entry
112242721 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112242721
09142 Cell motility
04810 Regulation of actin cytoskeleton
112242721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112242721
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112242721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
Ras
FF
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
112242721
NCBI-ProteinID:
XP_042165215
LinkDB
All DBs
Position
LG30:complement(16621297..16645640)
Genome browser
AA seq
1530 aa
AA seq
DB search
MIMMAKKQDVKSPTYNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLS
TSDFGGRVVNNDHFLFWGEVGRVVEEGPECRMHVVEQTEFIDDQTFQPHRSTAMQPYIKR
AASTKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLQADGFVLCMDVSRGMNRNFDDQLK
FVTNLYGHLSKTKKPIVLVLTKCDEGVERYIKDSHTFAITKKSLPVVETSARSNINVDLA
FLTLVQLIDKSRGKPKIIPYFEALKLQSQQIALAKDRYEWLVNRIVKNHNETWLNTSRRM
HTSSEFNEYVFLEGTAKCKKLFQQLVYRLKQEHIERRRKIYLSTLPLALSSLVPDLDEID
QLSWSGVQKVLESKQHFAHWFVVLEDSPWEDTSHIDNMEDERIPSDLLETLPAEDIFDAH
LEHLRNECKRAEMRQEFKHKLACSPFVTPGKPWEEARSFIMNEDFYQWLEESEYLDLYNR
HQKEIIGHAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLPAE
RDALVLKHIHFVYHPTKETCPSSPQCGDFRIEQLLASRFPTCYPFFNVKSYFGDIKADRI
NLVILGKDGLAREFANEIRALCTNDDRYVLDGKMYELTLRPIEGNVRLPVNSFHTPTFTP
HGCLCLYNSKESLTYVVESIERLRESTIGRRDSHIAQLLTSLLLVTKRGVGTYADIGGET
ALGLITQGQQVARRLQCSFLDPASPGVGYGHNVNESQINQVLRGLLDSRRSSSFSSSSPP
LPPQTPGPRDSPHQPSPEADIRIVMCLMCGDNYDVEQLLSPFLLPQHCRPTSNSGTSVIL
EQTVGPHKQVIELSLLSYHASFSLRKSRLVHGYIAVYSARRKASLETLCAFLCEVQDIIP
VQLLAVGESQVELTESESAREQLVQGEELAQEIEGRFNSVVCGSGGVVGGLHRMEMFHPF
LMEVVEKRNIVEATHMYDNVAEACINETAYSPRCSSPSTGTMFLDSDMDDVEPSPPYYDG
TLTSHGGSLNLPDLDSSDVSVISDISSFENKLNSKATPQVRPKPSVTFDFRKVGRNPYNT
DTMGHRRSLPSAVTWVPGGDGGYDPSDYAEPMDAVSKPRPSNEEIIYSVPHDSTQGKIIT
IRNANRMHANGNGSDSEADSSSLERRRKFSAAGVKPRLYRDRSKRLGKFSSFRTSFIGSE
DEMGALPKTKEDDFGTLKGDIINEEGEDPKKRNILKSLRRTAKKTRPKPRSSIPKPLESS
YFGVPLVNVVSPDRPIPLFIDKCVRFIETTGLNTEGLYRVSGNKCEMESMQRQFDQDHGL
DLVEKDFAINTVAGALKAFFSELPEPLVPCILQVELLEAFKINDREQRLYTMKDVLRRFP
RENYDVFRFVMSHLHKVSQLSRQNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTII
ETFIHQCAFFFYNQPLLDSPTGLAGLRASPTTTLTGGSAYSCYHSSPPSTATHFSPCSSR
PHHHPPVSPAVPPDPLHQHPHHTPTEQETL
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgataatgatggccaaaaagcaagatgttaagtcacccacatacaaccttattgtggtg
ggtttgtcaggaactgagaaagagaagggccagtgtggcgtgggtaagtcctgtctgtgc
aaccgctttgtgcgccccagtgccgatgacttctatctggaccacacgtcagtgctgagc
accagtgactttgggggtagagtggttaacaatgaccatttcctgttctggggggaggtg
gggcgggtggtggaggaggggccggagtgcaggatgcatgtggtggagcagacagagttc
attgatgaccagacgttccagccacaccgcagcactgccatgcagccctacatcaagagg
gcggcctccaccaagctggcctctgcagagaagcttatgtacttctgcacggaccagctg
gggctggagcaggactttgagcagaagcagatgcccgagggcaagttacaggctgacggg
ttcgtgctctgtatggacgtcagtagggggatgaaccgcaactttgacgaccagttgaag
tttgtcacaaacctttacggtcatctgagcaaaacaaagaagcccattgtgctggtctta
accaagtgtgatgagggggttgaacgctacatcaaagattctcacacctttgccatcact
aaaaagagtcttccagtagtggagacatctgcacgctctaacatcaatgttgacctagcc
ttccttactttggtgcaactcattgataagagcaggggcaagcccaagatcattccttac
tttgaggccctcaagcttcagagtcagcagatagccttggctaaagaccgatacgaatgg
ctagtcaaccgcatagtgaagaaccacaatgagacctggcttaacaccagcagacgcatg
cacacctcttcagagttcaatgaatacgtctttctggagggcacagcaaaatgcaagaag
ctcttccagcagctggtttaccgtctgaaacaggagcacattgagagacgtcggaaaatc
tatctgagcactcttcctctagcacttagctccctggtgcctgacctggatgagatcgac
cagctgagctggtctggggttcagaaggtcctggagtccaagcagcactttgcccactgg
tttgtagttctggaggactctccatgggaggacacgtctcacatagacaacatggaggat
gagcgcatcccctcagacctgctggaaacgttaccagccgaggacattttcgacgcccac
ctggagcacctgaggaatgagtgcaagcgggctgagatgaggcaggagttcaagcacaag
ttggcctgttctccctttgtcacgcctggcaagccctgggaagaggcccgcagcttcatc
atgaatgaagacttctaccaatggttggaggaatcagagtacctggacctctacaaccgc
caccagaaagagatcatcggccacgctaaagaggacttccaggagcttctgctggagtat
tccgagctcttctatgagctggaggtggacgcaaagcccagcaaggagaagatgggggcc
atccaggaggttttaggggaggagcagcggttcaaagccctgcagaagcttccagctgag
agagatgctctggtattgaagcatattcactttgtctaccaccccaccaaggagacctgt
cccagcagcccacagtgtggagacttcaggatagagcagctcctggcctcacgcttccca
acatgctacccattcttcaacgtgaagtcttattttggggatattaaagcggaccgcatc
aaccttgtgatattgggcaaagacggactggctagggagtttgccaatgagatcagagct
ctctgtaccaatgacgaccggtatgtgttggatgggaagatgtatgagctcaccctgcga
cctatcgagggcaatgtacgacttcctgttaactccttccacactcccaccttcacaccc
catgggtgcctgtgtctgtacaactcaaaagagtccctaacctacgtcgtagaaagcatt
gaaaggttgcgggagtcaacaatcggtagaagggacagccatatagctcagcttttaaca
tctctgctcttggttactaaaaggggtgtagggacctatgccgatattgggggagaaact
gctttaggtctgataacacagggacagcaggtagcaaggagattgcagtgtagcttcctc
gacccagcttcacctggtgtgggctatgggcacaatgtgaatgagagtcagatcaaccaa
gtattgagaggtcttctggactctagaaggagctcatctttcagtagcagctccccacct
ctgccccctcaaactccaggtcccagagactctcctcaccagcccagcccagaggcagac
atccgcatcgtcatgtgcttgatgtgtggagacaactatgacgtggaacagctcctctct
cccttcctactgcctcagcactgcaggccaacatccaacagtggcacctcggtgatactg
gagcagacagtgggacctcacaaacaggtgattgagctctctctcctttcctaccacgcc
tccttctccctgaggaagagcagattagtgcatggctacatcgctgtgtactcagcccgc
cgcaaggcttctctggagaccctgtgtgccttcctatgtgaggtccaggacatcattcct
gttcagctgctggctgtgggggagagccaggtggagctcacagaaagtgagtctgccaga
gagcagctggtccagggagaggagctggcccaagagatagagggcaggttcaacagtgtg
gtgtgtggatcaggaggggtggtgggtggcctgcacaggatggagatgtttcatcccttc
ctgatggaggtggtggagaaacgcaacatcgtggaggccactcacatgtatgataacgtg
gctgaggcctgcattaacgagactgcctactcccctcgctgtagctcacccagcactggc
actatgttcctagactctgacatggatgacgtggagccctccccaccttactacgacggc
acactcacctcccatggtgggagcctcaacctgcctgacctggactccagcgatgtctct
gtcatctctgacatcagctcctttgagaacaagctcaatagcaaagccacgccccaggtg
agacccaagccctctgtgacctttgacttccggaaggtgggcagaaacccctacaacaca
gacaccatgggtcaccgtcgctccctgccctccgctgtgacatgggtgccaggtggggac
ggaggttacgacccctcggactatgcagagcccatggatgctgtgtccaagccccggccc
agcaacgaggagatcatctactctgtgccccatgacagcacgcagggcaagattattacc
atccgcaatgccaatcggatgcacgccaacgggaacggctcagacagtgaggcggacagc
agttccctggagcgccgcaggaagttctcggcggcaggggtaaagccacggctctaccgc
gaccgctctaaacgcctgggcaagttcagcagcttccgcaccagcttcattggcagcgaa
gacgagatgggggctctgccaaaaaccaaggaggatgatttcggaaccctgaaaggagac
atcatcaatgaggagggagaggaccccaagaagaggaacattctgaagagcctgcggcga
actgccaagaaaaccagaccaaagcctcggtcctctattcccaagcccctggagagcagc
tacttcggggtgcccctggtcaacgtggtgtccccagacagacctatcccactcttcatt
gacaagtgtgtccgctttattgagaccacaggtctcaacacagaggggctctacagggtg
agcgggaacaagtgtgagatggagagtatgcagaggcagtttgaccaggaccatgggctg
gacctggtggagaaggactttgccatcaacacggtggctggggctctgaaggcctttttc
tctgagctgccagagcccctggtgccctgcatcctgcaggtggagctgcttgaggccttc
aagatcaacgacagggaacagaggctgtacaccatgaaggatgtactgaggaggttcccc
agggagaactatgacgtcttcagatttgtcatgagccacttacacaaggtgagccagctg
agcagacagaacctgatgaccagtgagaatctgtccatctgtttctggcccactctgatg
cggccagacttcaccaccatggacgccctgacggccacgcggacctaccagacaatcatc
gagaccttcatccaccagtgtgctttcttcttctacaaccagcccctcctggactccccc
actggcctggctggcctccgtgcctcccccaccaccaccctcaccgggggctctgcctat
tcctgctaccactcctcccctccctccaccgccacgcacttcagcccctgcagcagtcgc
ccccaccaccaccccccagtctcccctgcagtccctcctgaccccctccaccaacacccc
caccatacccccaccgagcaagagacactgtga
DBGET
integrated database retrieval system
