Oncorhynchus tshawytscha (Chinook salmon): 112242866
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Entry
112242866 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: WASH complex subunit 5-like
KO
K18464
WASH complex subunit strumpellin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112242866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112242866
Membrane trafficking [BR:
otw04131
]
Protein recycling
Others
WASH complex
112242866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Motif
Other DBs
NCBI-GeneID:
112242866
NCBI-ProteinID:
XP_042171266
LinkDB
All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MVDFLAENNLCGQAVLRIVSXGNAIIAELLRLSEFIPAVFRLKDKSDQQKYGDIICDFSY
FKGPEYYDSKLEAKPDLQDLDDEFRENNLEILSRFYLAFESVHKYIVDLIRYLDDLYEGV
YIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKMXGEVRERMLVSYYRYSAARSSAD
SNLDDICKLLRSTGYSSQSGAKRPANYPEXYFQRVPISSTFISMVIGRLRSDDIYNQVSA
YPLPEHRSTALANQAAMLYVCLYFIPSILQTQQAKMREIVDKYFPDNWVISVYMGITVNL
VEAWEPYKAAKIALNYTLDSANIREQASRYSVSMEGLRPQIQQLLKEGFLREEIVLDNVP
KLLNCLRDCNVSIRWLMLHTADSAYDPNNKRLRQIKDQVINDSKYNPKILFQVLLDTAQF
EFTLKEMFKKMLSEKQLKWESYRTEGSERMTELAEVFSGVKPLTRVEKNENLQAWFREIS
KQIESLNYEDSTAAGRKTVQLIQALVEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINI
KEEVLITMQIVGDLSYAWQIIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRI
NQANSPDLLSVSQFYSGELVTYVRKVLQIIPESMFTSLAKIIKLQIHAIMEVPTRLDKDK
LKDYAQLGARYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVRRVAY
ALHKGLIFNPKAKTSELMPKLKEMAATMDGFYRSFEYIQDYVSIYGLKIWQEEVSRIINY
NVEQECNSFLRTKIQDWQSVYQSTHIPIPKFPAVDESATFIGRLCREILRITDPKATCYM
DQLNTWYDLKTHQEVTNNRLFSEIQDTLGTFGLNGLDRLLCFMMVKELQNFLSVFQKTIL
RDKAMVDVFKAMLSAVNPVKGIVGRYQQLRKDSYQGGVYQVRQWKTFSNAKTIVCLTQKI
WGPVENESIMKVGQMQILRQQIANELNYSCKFDSKHLAAALENLNKSLLADIEAHYQDPS
LPYPKEDNNLLYEITASLEAAGIHNPLNKIYITTKRLPYFPIVNFLFIIAQLPKLQYSKN
QGMTCRKATDPVDWSPLVLGLLTLLKQFHSRYTEQFLALIGQFIRSIMEQCTSQKIPDMP
SDVVGALMFLEDYVRYTKLPRKVGLD
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggtggatttcctggcggaaaacaacctgtgtggtcaggcggtgctgaggatcgtgtcc
ncgggaaacgcgatcatagccgagctcctccgcctctcggagttcatccctgctgtcttc
agactcaaagacaagagcgaccagcagaaatacggagacatcatctgtgacttcagctac
ttcaagggtccagagtactacgacagtaagctagaagccaaaccagatctgcaggatctg
gacgatgagttccgtgagaataacctggagatactctcacgattctacctggcgtttgaa
agtgtccacaagtacatcgttgatctaatcaggtatctggatgatctgtatgaaggagtt
tacattcaacagaccctggagacggtgctgctgaatgaggatggaaaacagctcctgtgt
gaggcgctgtatctctatggagtcatgctgttggttattgaccagaagatgngaggggag
gtcagagagaggatgctggtgtcctactatagatacagtgctgcccgctcctcagcggac
tctaacctggatgacatctgtaagctgctgcggagtactggctactccagccaatcaggg
gccaagcggccagctaactaccccgagnnctacttccagagagtacctatcagttctacc
ttcatcagcatggtgatcgggaggctgcgctctgatgacatctataaccaggtgtctgcg
taccctctgcctgagcatcgcagcacagcgttggctaaccaggctgccatgctgtatgtc
tgtctctacttcattccctccatacttcagactcaacaggccaagatgagggagatagtg
gacaagtacttccctgataactgggtcatcagtgtctacatgggaatcactgtgaatctg
gtggaggcttgggaaccgtataaagctgccaagatcgccctcaactacaccctggactca
gccaatatcagagagcaggccagtcgttattcagtcagcatggagggcctgaggccacag
atccagcagctgctgaaggaagggttcctgagggaggagatcgtcctggataacgtccct
aagctgctcaactgtctccgggactgtaacgtttccatacgctggctgatgctacacact
gcagactccgcctatgatcccaacaacaagcgtctgcgccagatcaaagaccaggtgatc
aacgactccaagtacaaccccaagatcctgttccaggtactcctagacaccgcccagttt
gagttcaccctcaaagagatgttcaagaagatgctgtcagagaagcagctgaaatgggag
agttatcgaactgagggatctgagaggatgaccgagctggctgaggtcttctctggggtc
aagcctctaaccagagtggagaagaatgagaacctgcaggcatggttcagggagatctcg
aagcagatcgagtctctgaactacgaggactccaccgctgcaggcaggaagaccgttcag
ctgatacaggccctcgtagaggttcaagagttccaccagttggagtccaacctgcaggtg
tgtcagttcctggctgacaccaggaagttccttcaccagatgatcaggactatcaacatc
aaggaggaggttctgatcaccatgcagatagtaggagacctgtcttacgcatggcagatc
atagacagcttcacgtccatcatgcaggagagtatcagagtgaacccatccatggtgacc
aaactacgagcaaccttcctaaagttggcgtctgcgttggacctgcctctgctgcgtatc
aaccaggctaacagtccagatctgctcagtgtttctcagttctactccggggaactggtg
acctacgtcagaaaggtgttacagatcatccctgagagcatgttcacctccctggctaag
atcatcaagctgcagattcatgccatcatggaggttcccaccagactggacaaggacaag
ctgaaggactacgcccagctgggggctcgctacgaggttgccaaactcacccacgccatc
tccatcttcactgaagggattctgatgatgaagacgacgctggttggaatcatcaaggtg
gatcccaagcagctcctggaagatggtatcaggaaggagttggtgagaagagtagcctac
gctctacacaaaggacttatctttaaccccaaggctaagaccagtgagttgatgccgaag
ctgaaggagatggcagccaccatggacggattctaccggtcctttgagtacatccaggat
tacgtctccatctacggcctgaagatctggcaggaggaggtctctcgtatcatcaactac
aacgtggagcaggagtgtaacagcttcctacgcaccaagatccaggattggcagagtgtc
taccagtcgacccatatccccatacccaagttccccgcggtcgatgagtcggccaccttc
atcggacgactctgtagagagatcctccgcatcacagaccccaaggcgacgtgttacatg
gaccagttgaacacctggtacgacctgaagacccaccaggaggtgaccaacaaccgtctg
ttctctgagatacaggacaccctggggaccttcggcctcaacggcctggacaggctgctc
tgcttcatgatggtcaaggaactgcagaacttcctgtcggtgtttcagaagaccatcctg
agagacaaggctatggtggatgtctttaaagccatgctgagcgctgtcaatcccgtcaaa
ggtattgtgggtaggtatcaacagctcaggaaggattcctaccagggtggtgtttatcag
gttagacaatggaaaacattttcaaatgccaaaactatagtttgtttaacacagaagatc
tggggtccggttgaaaacgagtccatcatgaaggttggtcagatgcagatcctgaggcaa
cagatcgccaacgagttgaactactcctgcaagtttgactccaaacacctcgctgctgct
ctggaaaacctcaacaagtctctactggctgatatagaagcccactaccaggaccccagc
cttccataccccaaggaggacaacaacctgctgtatgagatcacagcctctctggaggca
gcaggcattcacaacccactcaacaagatctacattacaaccaagcgcctgccttacttt
cctatcgtcaacttcctcttcatcattgctcagctgcctaaactgcagtacagcaaaaac
caagggatgacgtgcaggaaagccaccgacccggtagactggtctcctctggttcttggc
ctgctcactctgctgaagcagttccactccagatacacagagcagttcctggctctcatt
gggcaattcatacgctccatcatggaacagtgcaccagtcagaagatcccggacatgccg
tccgatgtggtgggagctctgatgtttctggaggattacgtacgctacaccaaactgcct
cgcaaggtaggattagattag
DBGET
integrated database retrieval system
