Oncorhynchus tshawytscha (Chinook salmon): 112243018
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Entry
112243018 CDS
T05605
Name
(RefSeq) sphingosine 1-phosphate receptor 1
KO
K04295
sphingosine 1-phosphate receptor 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112243018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112243018
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Lipid
Sphingolipid
112243018
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
112243018
NCBI-ProteinID:
XP_042160391
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Position
LG02:73217504..73221684
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AA seq
411 aa
AA seq
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MEMEASRAAYAGTFPTESIGSLPTNTSSPSLLQFFWDYQNNDVIVTHYNYTGKLQTDRYR
EGLKPEAIAFLVVCLLIILENAVVLIAIWTNKKFHLPMYYLLGNLTLSDLLAGVTYMANI
IMSGPNTLRLTPILWFLREGGVFITLAASVISLLAIAIERHVTMVTMKPYHGAKKGRLLA
LIGGSWALAGLLGVLPVLGWNCMGRLDRCSTVLPLYAKSYILCCVSVFSGVLLAIVVLYA
RVFRIVRTNTQRQRLGGAKGSLRKGLARKSQKYMALLKTVTIVLGVFIACWLPLFLLLGL
DSFCPARRCRLLLKADYFLGVAMVNSLLNPIIYTLTSKDMRRAILKLLCRPCLMTKDGQV
KRMGVPFLECSFSKTEVASKKLEGLETTISSGNIVTAQSPIKTLYPKLFKV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaagcctcccgtgctgcttacgctgggaccttccccactgaatctataggc
tctctacccaccaacacctcctctccaagcctgctccaattcttctgggattaccagaac
aatgatgtcattgtgacgcactacaactacacaggcaagctccagacagaccggtatcgt
gaggggttaaaacctgaagccatagccttcctggtagtgtgtcttcttatcatcctggag
aatgctgtggttctaatagccatctggaccaataagaagttccacctgcccatgtactat
ctcctaggtaacctgactctgtcagacctcctggccggtgtcacctacatggccaatatc
atcatgtctggtcctaatacactgagactaactccaatactctggtttctgagggaagga
ggcgtctttatcacattagccgcctccgtcatcagcctattggccatcgcgatagaacgc
cacgttaccatggtgacaatgaaaccataccacggggcaaagaagggtcggctgctggct
ctgatcggggggagctgggcgttagcagggctgctgggggtgctccccgtcctgggctgg
aactgtatgggtcgcctggaccgctgttccacggttctcccgctctacgccaagtcttac
atcctgtgctgcgtgtccgtgttcagcggcgtgctcctcgccatcgtcgttctctacgcc
cgcgtcttccgtatcgtgcgcactaacacccagcgccaacgcctcggaggagcaaaggga
agccttcgcaaaggcctcgccaggaaatcccagaagtacatggcgctcctcaagacagtc
actattgtactcggcgtcttcatcgcttgttggttgccgctcttcctcctcctcggccta
gactcattctgccctgcccgccgctgccgactgctcctcaaggcggactacttccttggc
gttgccatggtgaactcgctcctcaaccccataatatacaccctgaccagcaaagacatg
cgtcgcgctattttaaaactgctctgccgcccgtgtctcatgaccaaggacgggcaggtg
aagaggatgggggtgccgttcctggagtgtagcttcagtaagacggaggtggcatcgaag
aagctggaaggcctggagacaacgatctcctctgggaacatcgtcacggctcagtcaccc
ataaagactctctaccccaagctcttcaaggtctaa
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