Oncorhynchus tshawytscha (Chinook salmon): 112243056
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Entry
112243056 CDS
T05605
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112243056
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112243056
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112243056
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112243056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
112243056
NCBI-ProteinID:
XP_024266668
LinkDB
All DBs
Position
LG03:73415829..73421503
Genome browser
AA seq
991 aa
AA seq
DB search
MAPVQQEPEIQFAQRLASNERPMRTKAIKKLRKYIRVRSQKIQGGFEGDELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLIHSFQNIQSQFMFLETFLQTIKREWTGIDRLRMDKFFQL
VRFVFRNTFEMMKRKEWETSVVTRFLELLTAQVLHSSSGAPCGLQFHILDIYMTELAAVG
SAELTAAQNMTFIDPFCKTASKTKDRILLRAICSSIFSAIVDQAPFAIEDLLKEVKATGG
GAEESDSGQASEEEVEKDPPKGKKTAKEALKKTTGGQTNGTVSTEEDDDEDEDGLGDEDE
DEMLHMESDSESEMPDDAGIGPVLQFDYLSLADRLFGLARRSNTPSHNRQRLYKVVKTLR
DLSEGVFPQDEYPEEVSTDEDDDEMFGSRKRMKRGRGFGEEEEESSPAKKWKGKKKDSKA
RTSDQPAATDDSKPAETPGDSNNKKKKKKRRRKKKTGEVKTEEQNGVAAKSEVKVETDTT
PASAPQTTDSKEAETEPSIPAKGTDTGASLLKEKAKVTAMETGVQSGTPQDVVVGNLSSV
TVMEVDQKKQSETPVPDAKKKNIKKSKTPAPKQKKEVAEPATSAPETATTTPSRRKNTKQ
EPEEQTTVEEVEMTLETVDETTATPPKKKRRRRRNKVKRTAETDTTEVDLEPDSTPAKEP
PVDLRIAATPLKKKKLKVAKAGEESVEGDIRPETEADVLVVDTKVEPACVATSTQLKKKK
KHARAESETPPKADANLTLIDAEVQTLEAATPTPLKKKKHAKAEVQTLEAATPTPLKKKK
SSGLVAQELETTTVKESVSEEQPTDADLDTPLKKGKKKRKVPVVIEFEAEVNGMAGGKKA
KLSNDSKELSTPVSAKKTKKMTPKNAGAESDFITFQNHATIPTPLFFKTTKGSPSTPLSS
KKKKCQTPKSESKKVTFGLNKNKTAGSPEFRKTDRSLLVSPEGSSRVPFDPQQKPLFGVL
KSPEASLTKSTKKTKSTLKTTPKRPTAADFF
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtacaacaagaaccagagatccagttcgctcaaagattggcttctaatgag
aggcccatgcgaacaaaagccatcaagaagctaagaaaatatattcgtgttaggtcacag
aaaatccaaggtgggtttgaaggtgacgagttactcaaactatggaaaggcctcttttat
tgcctgtggatgcaggacaagccacttcttcaggaggagctgtcgaatcagatctctggc
ctgatacacagcttccagaacatccagagccagtttatgtttctggagaccttcctgcag
accatcaaaagagaatggaccggcattgacaggcttcgcatggataagttcttccagctg
gttcgtttcgtgttcaggaacacttttgagatgatgaagaggaaagaatgggagaccagt
gtggtgaccaggtttctggagctcctgactgcccaggtcctccacagctccagcggagct
ccctgcggattacagttccacatactggacatctatatgaccgagctggctgcagtcggc
tcagctgagctcacagcggctcagaacatgacattcattgaccctttctgcaaaacagcg
tctaaaacgaaagatcggatcttgctcagggctatctgcagcagcattttcagcgccatc
gtggaccaggctcccttcgccatcgaagacctgttgaaggaagtgaaggctacaggtgga
ggggctgaggagtccgactcgggacaggcttctgaagaggaggtagagaaggatcccccc
aagggcaaaaaaactgcaaaggaagccctcaagaaaaccactggagggcagaccaacggt
actgtgtcaactgaggaagatgatgatgaggatgaagatggtctgggcgatgaagacgaa
gacgaaatgcttcatatggagagtgactctgagtctgagatgccagatgacgctgggatc
ggacctgttctccagtttgactaccttagcctggcagacaggctgtttgggctagccaga
cgcagcaacacccctagccacaacagacagagactgtacaaagtcgttaagactctccgg
gatctcagtgaaggagtctttccacaggatgagtacccagaggaggtgtcgacagatgag
gatgatgatgaaatgtttggcagcagaaagaggatgaaacggggacgaggcttcggggag
gaagaggaagagagctcaccagccaagaaatggaaaggcaagaaaaaagactccaaagca
agaacgtctgaccagcctgccgcaacagatgacagtaaaccagcagagactcccggagac
tccaataacaagaagaagaagaagaagaggaggaggaagaagaagactggagaggtgaag
actgaagagcagaacggggtggcggcgaagtcggaggttaaggttgagacggacacaact
cctgcttctgcaccgcagacgacagactctaaagaagcagagacggagccctctatccca
gccaagggcaccgatacaggagcgtctctcctgaaggagaaggcaaaggtgacagccatg
gagacaggggtccaatcaggaactccacaggatgtagtggtaggtaacttgtcatctgtc
acagtcatggaggtagaccagaagaaacaatcagagactccggtaccagacgccaagaag
aaaaatatcaagaagtccaaaacgcctgcaccaaagcagaagaaagaggtagcagaacca
gcaacgtctgcccctgagactgctactaccaccccaagcaggaggaaaaataccaagcag
gagcctgaggagcagaccactgtagaggaagttgaaatgacattagaaacagtagacgag
accacggccaccccaccgaagaagaagaggaggaggaggaggaacaaggttaaacggacc
gctgagacagacacaacagaggtggaccttgaaccagactctaccccagccaaggagcct
ccagttgacctccgcatcgccgccactcccctgaaaaagaagaaactaaaggtggcaaag
gctggagaggagagcgtcgagggtgacatacggccagaaactgaagcagacgtcctggtt
gtagacaccaaggtggagccagcatgtgtcgctacatcaacccagctcaagaagaagaag
aaacatgccagggccgaaagtgaaaccccgccgaaagcagacgcaaacctcacactgatc
gacgctgaggtacagacgctggaggccgccacacctaccccactgaagaagaagaaacat
gccaaggctgaggtacagacgctggaggccgccacacctaccccactgaagaagaagaag
agctctggactggtagcgcaggagctagagaccacgacagtgaaggagagcgtgtcagag
gagcagcctacagatgctgacctggacacgcccctgaagaaagggaagaagaagaggaag
gtcccggtagtgatagagttcgaggctgaggtcaacgggatggctggaggcaagaaagcc
aaactgagcaacgacagcaaagagctgtccacgccggtgagcgccaagaaaaccaaaaaa
atgacgcccaagaatgcaggggcggagtctgacttcatcacgttccagaaccatgccacc
atccctactccccttttcttcaagaccaccaagggaagccccagcacaccgctatccagc
aagaagaagaagtgtcagactccaaagtccgaatccaagaaggttaccttcggactcaat
aaaaacaaaactgcaggatccccagagttcaggaagactgaccgcagcctgctggtgagt
ccagaggggtcgtcccgagtgccgtttgacccccagcagaagcccctgtttggggtcttg
aagtccccagaggcctctcttaccaaaagcactaagaagaccaagagcaccctgaaaacc
acccccaaacgccccaccgcggctgacttcttctag
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