Oncorhynchus tshawytscha (Chinook salmon): 112243070
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Entry
112243070 CDS
T05605
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112243070
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Protocadherins
112243070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
112243070
NCBI-ProteinID:
XP_024266680
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All DBs
Position
LG03:complement(73010050..73013873)
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AA seq
980 aa
AA seq
DB search
MMRGILTGWHRWIFGFITLEMLFVSLAESEGNTLKYQTNEEGSPGTVIGNLAKDMSLSRS
FSSKTNFRMMKQFNDSFIRVRETDGELTVGERIDRERICRHTLQCLITFDVVSFSKERYN
LIHVEVEVKDINDNSPEFPTKESTVEISENSDVGFRIPLDPAEDADVGSNYIQSYQISVN
SHFSIDVLLRADGVKYAELVLMKELDRETQSSYAMQLIATDGGNPFNSGSTKITITVTDF
NDNRPVFDQNNFSVTLPEDAPVGFVLLDLNAVDPDEGLNGEVVYGFGKQVSAEIRALFEV
YSKSGRLTLKNPVDFETKKTYELDVQATDLGANPIPAICKIIINVKDVNDNAPEISITPM
TSISTGIAYISETADKDSLVALISTADRDSGVNSQVHCTLYGHDHFKLKQAYEDSYMIVT
AAALDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKHVYEVSVVENNA
PGAYITTVEARDADLGTNGKITYRLLDSVIMGSPVNTFVSLNAISGSIYALRSFNYEVMK
HLEVHIQASDGGSPQLQSSAIINLKIVDQNDNSPSIMEPVLNKGSAEVFLPKHAPAGYVV
TQIKAMDADEGINAQLSYNITEGGHLGFSINKVTGKLHVSCELNYDLSETLRVLVAVNDN
GTPSLTSTATIHLTLIEGTPPSVPAMVQNDSEEVFEWDMSIAIIIALAGSCSLLLLGIIL
ITTTCSRHKREKRERCKDKDKVDIQHVEKGESSHIDSLITNHKSNAFDVHPFPEKALLAS
SNTIKTAPGDGRQEQECDFDNRIMESKLEGYSTLPGYRKETLRPITIWKGNSFTTISARD
PQFSGKDSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTSECKILGHSDRCWSPSSSR
PNTSLSHGPHLSTFSKTASLPRNTLQRDTYYQQAHLPKTNGLQSVYEKVQHQEFDYILVC
PPTPARILETGEISLLEYGQ
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtggcattttaacaggttggcatcgttggatatttggattcataacactagaa
atgttatttgtctctctggctgagtctgagggaaatactctgaaataccagaccaacgag
gagggaagtccaggaacagtgatcggaaacctggccaaggacatgtccttgagtcgctct
tttagctccaagactaattttagaatgatgaaacaattcaacgattcttttatcagggtg
agagaaaccgacggggagcttactgtcggggaaaggattgacagagagagaatctgcagg
cacactttacagtgtctcatcacttttgatgttgtcagtttttcaaaagagaggtacaat
ttgattcatgtcgaggtggaggtaaaagacattaatgataactctccggagtttccaacc
aaggaatctacagtggagatttctgaaaattctgatgtggggttccgtattcctttggac
ccagccgaggacgcagacgtcggatcaaactacatccaaagctatcaaatttctgtcaac
agtcatttttccattgatgtgcttttgagagcggatggggttaaatatgcggagttggtg
ctaatgaaagagttagacagggagactcagtcatcttatgcgatgcagcttattgccaca
gacggaggaaacccatttaactcgggttcaacaaaaataaccataacagtgacagacttc
aacgacaaccgtcctgtttttgaccagaataatttctcggtcactttgcccgaggacgca
ccggttggattcgttttattggacttaaatgcagttgatccagatgagggtttaaacgga
gaggtggtctatggattcggaaaacaggtttctgcggaaatccgagcacttttcgaagtg
tacagtaaatccgggcgcctaacgctcaagaacccagtggattttgagaccaagaaaaca
tatgagttagacgtgcaggcgactgatcttggagccaacccgatccccgctatctgtaaa
ataataattaatgtcaaagacgttaatgacaatgccccagaaataagtattacgccaatg
acctccatctcaacaggcatcgcatatatcagcgagaccgcagacaaggacagcctagtg
gcgctgatcagcaccgcggacagggactcgggcgttaacagccaggtccattgcacctta
tatgggcacgaccatttcaaacttaaacaggcttatgaggacagctacatgattgtcacc
gcagcagccctggacagggagaagataagcgagtacaatttaactgtgatggctgaagat
ttcgggtcacctccattgagaaagatcacacaatacaccataaggctaagcgacgagaat
gacaacgccccacactttactaaacatgtctatgaagtttctgtcgtagaaaataatgca
ccaggggcatatattacaactgttgaggccagagatgcagacttgggaactaatggcaaa
attacatacagactattagacagtgttataatgggatcacctgtcaacacgtttgtatct
ctaaatgcaatctctggttcaatatatgcactgagaagcttcaactatgaagtcatgaaa
catctggaggtacacatccaggcaagtgatgggggctcaccccagcttcagagcagtgcc
atcatcaatctaaaaatagttgatcagaatgacaactctccgtccatcatggagcctgtc
cttaataagggatctgctgaggttttcctgcccaaacatgcacctgcaggttatgttgtc
acccagataaaggccatggatgctgatgaaggcataaacgcgcagctgtcttacaatatc
acagaggggggacacttgggtttctccattaacaaggttactgggaagttacatgtaagt
tgtgagctgaactacgacctgtctgaaacactgagagtcctcgtggctgtcaacgacaat
ggaacaccttctctgacctccacggccactatacacctcactctcatcgaaggcacccct
cccagtgttcctgctatggtccaaaatgacagcgaggaagtctttgaatgggacatgtcc
attgccattatcattgccttagcagggagctgctccctcctcttgctaggcatcatcctg
atcactaccacttgcagtcggcacaaacgggagaagagagagagatgcaaggacaaggac
aaagtagacatacaacatgtggagaagggggagagcagccatattgattcattgatcacc
aaccacaaaagcaatgcgttcgatgtacacccttttcctgagaaagcactgttggcctcc
agcaacacaataaaaacagccccaggtgatggcagacaagaacaagagtgtgactttgac
aacaggataatggagagtaaattagagggttattcaacactgcccggctataggaaagaa
accctccgacccataaccatatggaagggcaactcattcacaaccatctcagccagagat
cctcagttcagtgggaaggacagtgggaaaggagacagtgactttaatgacagtgactct
gacatcagtggggatggacacaaaaaagactccccaccgataaacagtctctgggcctgc
accagtgagtgtaaaatcctaggccactcagaccgatgctggagcccctcatcctctaga
cccaacaccagcctctcccacggaccacacctctcaaccttctccaagacagcctcgttg
ccacggaacaccctgcaaagagacacctactaccaacaggctcacctacccaagaccaac
ggtctacaaagcgtctatgaaaaagtccagcaccaagaatttgattatattctggtttgt
ccaccaacaccagccaggatactagagactggtgagatatccctcctggagtatggacaa
taa
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