Oncorhynchus tshawytscha (Chinook salmon): 112243467
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Entry
112243467 CDS
T05605
Symbol
fhip1b
Name
(RefSeq) LOW QUALITY PROTEIN: FHF complex subunit HOOK interacting protein 1B
KO
K26420
FHF complex subunit HOOK interacting protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112243467 (fhip1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112243467 (fhip1b)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
112243467 (fhip1b)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
112243467 (fhip1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Motif
Other DBs
NCBI-GeneID:
112243467
NCBI-ProteinID:
XP_042175950
LinkDB
All DBs
Position
LG03:complement(76332987..76406496)
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AA seq
1167 aa
AA seq
DB search
MSWLSRLTPRGPGGRSSRNVASSSPCTADPETCLMVFENHWRQLSWVLEQQEPSGCSDDL
TAVRNHTDQMLCLLAEERPGEVGEGPPGGPILGLVVTENVLERVVQWHLRRGLDPDSQGA
LLKLFEMLIGQSQQPLLQHKAVLQPLLGLLGACAEPQLGCPPSLENSLVLLLNQICVSMA
RAPAVLELLFRSAPAQHGPTNLLIFSLLVPFIHRDGAIGQQARDALLLVMATSASNQGVA
RYIAENSYFCPVLATGLSALYSSLPRKIEVRGDDWHALRREDWMGVSSLVLFMNSLEFCN
AVIQVAHPLVRSQLVDYVHNGFLVPVMGPALHKSSVDEMIASTAYLDLFLRSVTETALLK
TFLRFILMHRHDNDTILDTLLTRVSSNSRLCMVSLSLFRTLLSLNCEDLMLQLVLRYLLP
CTHVMLSQRRAVRDTDLYGKSADKFLSLIPECCRLSVLPSAEREEEPAFWGKVLNSPSSE
SPVHPKPSTPSRLALFMRQQSTALPFTPSPTETVPSSPRGGPSTPLSPDSPMHPVPEGLD
WESGYLEYLRDARRGVELCSWACRNWSAPYDGEDPSPNTAPLPPPPPTSNPSLAMFPEHF
SFQQGGGGGSTSHGQQRAAVVAAARSEWSSTERDSGEWDVTICKNNCTISLTPRTKKRSL
QREEVPLPKPLHLPPDSTSASVPDPSAAAHLPSGPSIGPHQAIFNGTSSGGQEDGCPDSQ
DGGMEVKKVKRDLDEQQQHGDSSQNVAVGASPTPVPTPAQSCGPLQGLHREGNGSVTGEN
SRRLTSHVQSHTQDQPAPWTPASCANSSNVSLTPQVPGSGPPEAMLSTQSEAVERLISEL
LDGAGPGEGGQQGPGDSNGQGISIEAFTQELRELEERVRERSRGVGLLRQLEETTRDPDS
EEPLPPSPLDADLIGTGAGSGVEPKVVGSAVGLFSPARPLGQPSAQPYTGPFMVVLFAKL
ENMLQNTLYVNILLTGILGQLACYPQPLLRSFLLNTNMVFQPSVKSLIQVLGSVKSRIEV
FAASHENFPAMLRKAQRYLVARGKVDWADSSPMGVPTLRRSDSLVKSRKPSLGDLIMRHT
NSPTRARHAAQLALAHVRDGGQSLHSALFRGGTGGGASGLEKQVEALRVKNAVYCAVIFS
EFLKELAALAQEHAVSMPFLQSHDTEE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagctggctgagccggctgaccccccggggtccggggggcaggtccagtaggaacgta
gcctcttccagtccctgtactgctgacccagagacctgcctcatggtgttcgagaaccac
tggagacagttgtcctgggtactggaacagcaggagccgtcaggatgtagcgatgacctc
accgcggtgcggaaccacaccgatcagatgctgtgcctcctggctgaagagcgaccggga
gaagtgggcgagggcccccccggtggacccatcctgggtctggtggtgaccgagaacgtc
ctggagcgagtggtgcagtggcacctgcgtcgcggattggacccagacagccagggggcg
ttgctcaagctgttcgagatgctgataggccagtctcagcagcccttgctccaacacaag
gcggtgctgcagcctctactgggtctgctgggggcctgtgctgagccccagctgggctgc
cctccctctctggagaacagtctggtgctgctgctcaaccagatctgtgtgtcgatggcg
cgtgcccctgcggtgttggagctgttgtttaggtctgccccggcccaacacggtcctacc
aacctgctcatcttctccctgttggtccccttcatccaccgtgacggagccatcggacag
caggcccgggacgccctgctcctcgtcatggcaacctccgccagcaaccagggcgtggca
cgctacatcgcagagaactcctacttctgcccagtgctggccacgggcctcagtgctctc
tactcctccctgccgaggaagatagaggtacggggggatgactggcacgctctgcgcagg
gaggactggatgggcgtgtcttctctggtgctcttcatgaactctctggagttctgtaac
gctgtcattcaggtggctcaccccctggtccgcagccagctggtcgactacgttcacaac
ggcttcctggtccctgtcatgggacccgccctacacaagtcatctgtagatgagatgata
gccagtacagcctacctggatctgttcctgcgcagtgtgacggaaacagctctcctcaaa
accttcctacgcttcatcctcatgcatcgccatgacaacgacaccatcctggacaccttg
ctaactcgcgtcagcagcaactccaggctgtgtatggtgtctttgagcctgttcaggact
ctgctctctctcaactgtgaagacctcatgttgcagctcgttctcaggtatcttctaccc
tgtacccatgtgatgttgagtcagaggcgtgccgtcagggacaccgatctatatggtaaa
tcagctgacaagttcctgtccctcatcccagagtgctgccgcctcagcgtactgccctct
gctgagcgggaggaagaaccagccttctgggggaaagtactgaacagccccagctcagag
tctcctgtgcaccccaaaccgagcactccgtcccgcctggccctcttcatgcgccagcag
agcactgcactgcccttcaccccctcccccactgagacggtcccctcgtccccccgcggg
ggccctagcacccccctgtcccccgacagccccatgcaccccgtcccagaggggctggac
tgggagtcggggtacctggagtacctcagggacgcccgtaggggggtagagctgtgctcc
tgggcctgccggaactggtcagccccctacgacggagaggacccctcacccaacacggcc
cctctaccacccccgccccccacctccaacccctccctggccatgttcccagagcacttc
tccttccagcaaggaggaggaggtggtagtacctcccacggccagcagagggcagcggtg
gtggcagctgcgcggtcagagtggagcagtacagagagggacagtggagagtgggatgtc
accatctgtaagaacaactgtaccatcagtctcacgccccgcaccaagaaacgcagcctg
cagagagaggaggtccccctccccaaacctctccacctccctcctgactctacctctgcc
tccgtccctgacccctctgctgccgcccacctcccctccggcccctccataggccctcac
caggccatcttcaatggaacgtcgtcggggggtcaggaggacgggtgtccagacagccag
gatggagggatggaggttaagaaggtgaagagagatttggacgagcagcagcagcatgga
gactctagtcagaacgttgcagtaggtgccagcccaaccccggtccctaccccggcccag
tcctgtgggcccctacaggggttgcacagggaagggaatggaagtgtgactggggaaaac
tccaggcgtctaacatcacacgtacagagtcacacccaggatcagcctgctccgtggact
ccagcatcctgtgccaactcctccaacgtcagcctgacccctcaggtccctggatcggga
cctccagaggcaatgctctctacccagtcagaagcagtggagagactgatctctgagctc
ctggatggggctggaccgggggagggggggcagcaggggcccggagactccaacggccag
ggcatcagcatcgaggccttcacccaggaactccgggagctggaggagagggtgagggaa
aggagcaggggggttgggcttctcagacagctggaggagaccaccagagaccccgactca
gaggaaccactgcccccctcacccctggacgctgacctgattgggactggggcagggtct
ggagtggagcccaaggtagtggggtcagctgtggggctgttcagccctgccaggcctcta
ggacagccatccgctcagccctacacaggtccgtttatggtggttctgtttgccaagctg
gagaacatgctccagaacactctgtatgtgaacatcctgttgacggggattctgggccag
ctagcctgctaccctcagcccctgctccgatccttcctcctcaacaccaacatggtgttc
cagcccagcgtcaagtctctcattcaggttctgggctcagtaaagagccgcattgaggtg
tttgcagcatcccatgagaacttccctgccatgctgaggaaagcccagcgctacctggtt
gccaggggcaaggtggactgggctgactcttcccccatgggggtacccaccctgcgacgc
tctgattccctggtgaagagccggaaaccttcgctaggcgacctgatcatgcgacacacc
aacagccccacgcgggcacgccatgccgcacagcttgccctggcccacgtacgagacggt
ggccaatcgctgcacagtgccctgttccggggagggactgggggaggggcgtcggggctg
gagaaacaggtggaggctctgagggtgaagaacgccgtctactgcgccgtcatcttctct
gagttcctcaaggagctggccgctctggcccaggagcacgcagtctccatgcccttcctc
cagagccacgacactgaggagtga
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