Oncorhynchus tshawytscha (Chinook salmon): 112243700
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Entry
112243700 CDS
T05605
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
otw00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
otw01100
Metabolic pathways
Module
otw_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
112243700
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
112243700
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112243700
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
112243700
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
Glycosaminoglycan
112243700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
VD10_N
Motif
Other DBs
NCBI-GeneID:
112243700
NCBI-ProteinID:
XP_042183826
UniProt:
A0AAZ3RSP6
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Position
LG09:82499667..82502810
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AA seq
450 aa
AA seq
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MRLLGDRAFPAQEYNPSLFQSFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCKCQYKHIV
DWCGCSPNDFKPQDLVRIQQLTRPTFFARKFESTVNQEAIDILDTHLYGHYAPGTVAIKA
YWESLFERADGVGSLSDVALTAYSSFFRLGLKSLDSSQTSLETCRYEPIGYPVSVHLYFY
DERFQGYLVRQEVQKGGSRVRETVEVWAVPQATMQLENNLREFERLKNLEVGTEWDPKER
IFRNFGGVIGPLDEPVAVQKWVRGPNLTATIVWIDPAQTVAASYDISVDVDAEYTQYKPP
LQRPLRPGAWTVRVLRLWERVAEARFLVMPLAFKGREPLRQKEDSWLHAGPPGNLYLEQG
FQQLRSVLKLPPQEPALQEAQQRAQLVGKPLEAWVDRTVGAFWVTGDLCSTLPSPGPCPS
LGPCTKSTWSSLAPDPKSELGPVKGDGRIR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgctaggggacagagcttttcctgctcaggaatataatccctctttgttccag
tccttcttccacacagtgctggggaacagtcacatgtgtgactctctggtggacaacaac
ctgcgtgttaccaactggaacaggaagctgggctgtaagtgccagtacaaacacatagtg
gactggtgcggctgctctcccaacgacttcaaaccacaggacctcgtcaggatacagcaa
ctgacccggcccacgttctttgcccgaaagtttgagtccacggtgaaccaagaggccata
gacatcctggacacccacctgtatggacactacgccccagggacagtggccatcaaggcc
tattgggagagcctgtttgagcgggcggacggggttggctccctcagtgacgtggccctc
acggcctactcttccttcttccgcctgggcctcaagagcctggatagcagccagaccagc
ctggagacctgcaggtatgagccaataggctacccggtgtcggtgcacctctatttctac
gacgagcgtttccagggctacttggtccgtcaggaggtgcagaagggggggtcaagggtc
agggaaacagtggaggtgtgggccgtgcctcaggccaccatgcagctggagaacaacctc
cgggagtttgagaggctcaagaacctggaggtgggcacagagtgggaccccaaggagaga
atcttccggaacttcggcggtgtgatcgggccgttggacgagccggtggcggtacagaag
tgggttcgggggcccaacctcactgccaccattgtgtggattgaccccgcccagacggtg
gcggcatcttatgacatcagtgtggatgtggacgcagagtacacgcagtacaagcccccg
ctgcagcggccgctccgccccggggcctggacagtcagggtgctgaggctgtgggagcgc
gtggccgaggctcgcttcctcgtcatgcccctggccttcaaaggacgagagccactacgc
caaaaggaggacagctggctgcacgcggggccaccaggcaacctgtacctggagcagggc
ttccagcagctgagatctgttctgaagcttcccccacaggagcctgccctgcaggaggcc
cagcagagggcccagctggtgggcaagcccctggaagcctgggtggaccgcactgtgggg
gccttctgggtgaccggggacctgtgctccaccctgccttccccgggcccctgcccttcc
ctgggcccctgtaccaagtccacctggagctccctcgccccagaccctaagtcagaactt
ggccctgtcaaaggtgatggccggatcaggtag
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