Oncorhynchus tshawytscha (Chinook salmon): 112243919
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Entry
112243919 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 3-like
KO
K20162
DENN domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112243919
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112243919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WD40
uDENN
dDENN
WD40_2
SPA
Motif
Other DBs
NCBI-GeneID:
112243919
NCBI-ProteinID:
XP_042174169
LinkDB
All DBs
Position
Unknown
AA seq
1271 aa
AA seq
DB search
MADHLPSGLLEACVVVGASGDKLKDVYQSLQQGNSTTDLLILDPEVLQVHVPPFVTKENA
DESGVPRTFSRVQCRRSFIKKKERLVVAPSGPGGAGSSEGATVTEDVSVPKDIDLMALPQ
LCFPGGLQVTNEPKEERFHFLVFTDVFGNQTHGVVVQCCRPFQEGSVFYQNGHWSSTRTT
KLYTAFAICVISKHPYYNALKDCLSCLLVQLRTCRLSEERVKEFAAKLSLVPIPPPGQLH
VVFNLRPLMIILPSREDKEHPAVDLDLHLPFLCFRSKQILQIITGILMEQRVVFFSADWA
RLTLVAECFMFYIHPLHWQHPYVPILSAQMLDFVMAPTAFLMGCHLNHFEEVAAETDDLI
LINIDDGTVSSSCSETVDLPDVPFISAECFTKRRKGLQLQYDLEVCHQGAGTDVNEMRML
RRQWQQNLNWEIQKVTLELIVNMFRDVSGHLNYEHRVFNSEEFLKTRELADLPFYRKVLE
THIFHSFLKDRLNRKMDAFTRMEVNTRSETQKMKAMTDNPRRPTMQEMARKYSSNPEIRL
NKRLGMSLPNLGEERHLNLLRQTSLKKTIIPESAFKIPPKPVKIFKLPECPPPMVHHHVQ
NYYGELIILLGKAISCVPPEDSTLLARYFYLRGFMNTLCSKRLDALSDFQNLYKTDIEIF
PTDLVKALVDSLQKDEFSQVDRRPELKRLIFKVKTDNEMVLVQADDHVKKFQLPKTHMLQ
EDFVKRIQESGIVKDVATIHRLFEALTVGQQKQIDPEVFRVFYTFWKETEVEAQDVHLPA
EVMEHLDNNECVYKLSCSVKTNQGVGKIAMTQKRLFLLTDGRPGFIEITKFRDIKEVKIS
FAPFLLLRIPSLKIKCSLRKEVFEANLKSACDLWNLMVREMWAGRTMADDHKDPQYMQQA
LTNVLLMDAVVGCLQTQKAIFAASKLAYFDRVKHEVPVMVPKTTLETLKHKINPSLDLPA
PQTVHVLLYTPGQLSYSEADGDGNPKLWCALSGGRVVVFDAASWSMQQNCVQVGSSQLNC
MLGLDQDQVWIGSQDSIIYIIDTCLCMSCSVWTTIRLLHGACFNPTVPLLPPRQTYSCSA
DGTVILWDLSTLKVKKQFQLTCDRLMSIQLFNGTLWCCARDCIVELRKNGTPHRKMTLPE
DLRSMSTEFSSLILFLERGQLWTSCSDSDELCLWHCKDLTKPFLRVRLQNCTGVNCMIKV
KNQIWVGCSGPSPDQCRMSGKIYIVDTESHSVEKELMAHTDSVQALCSAEGRYVLSGSAC
QDGKIAIWKVE
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccatcttccctcagggctactggaagcgtgtgttgttgtcggagcctctggg
gataaactcaaggatgtctaccagtctctacagcagggcaacagcacaacagacctcctt
attttagacccagaggtcttgcaagtccacgtacctccgtttgtgaccaaagagaatgca
gatgagtctggtgtccccagaaccttcagtcgagtccagtgcagacggtccttcatcaag
aagaaggagaggctagtggtggctcctagtggccctggaggggctgggagcagtgagggg
gccactgtcactgaggatgtcagcgtccccaaggacattgacctcatggccctgccccaa
ctctgctttccaggggggcttcaagtaacaaatgaaccaaaagaagagcgttttcacttt
ctagtcttcacggatgtgttcggtaaccaaacccatggagtggttgttcagtgttgtaga
ccatttcaggaagggtcagtgttctatcagaatggacactggtcgtccaccaggaccact
aagctctacactgcttttgccatctgtgtcatatccaagcatccttactacaatgctctg
aaggactgtctgtcttgcttgctggtgcagcttagaacatgcaggttgtctgaagagagg
gtgaaggaatttgcagccaaactgtctctagtacccattccaccccctggacaactacat
gtggtgttcaacctgagacccctgatgatcatactgccttccagagaggataaggaacac
cccgctgtagacctggacctccatttgcccttcctgtgctttagatccaaacagatttta
cagatcatcactggtattctgatggagcagagggtagtgttcttctcagctgactgggcc
cgcctcaccctggtggcagagtgtttcatgttctacatccaccccctccactggcagcat
ccctacgtgcccattctctcagcccagatgctggacttcgtcatggcccccaccgccttc
ctcatgggctgccacctcaaccactttgaggaggtcgctgcggaaacagacgacctgatc
ttgattaatattgatgatggaacagtgtcttcttcctgctcagagactgtcgacctacca
gacgtccccttcatttctgcagagtgttttaccaagcggaggaagggcctccagctacaa
tatgatctagaggtgtgtcaccaaggggccggcacagacgttaatgagatgcgcatgctg
agaagacaatggcagcagaacctgaactgggaaatacagaaggttaccttggagctcatt
gtcaacatgttcagggatgtcagtggtcacctgaactatgaacaccgagtgtttaacagt
gaagagttcctgaagaccagagagctagctgaccttcccttttacagaaaggtcttggag
acacacatctttcattcattcctgaaggaccgcctcaataggaagatggatgctttcaca
cgcatggaagtcaacactcgctcagagacacagaaaatgaaggcgatgacagacaacccc
aggaggcccaccatgcaggaaatggccaggaagtatagcagcaacccagagatccgtctg
aacaagaggctggggatgagcctccccaacctgggagaggagcgccatctcaacctcctc
agacaaacctccctcaagaagaccattatccctgaaagtgccttcaagatcccgcccaag
cctgtgaagatcttcaagctgccagaatgtcctcctcccatggtgcaccaccatgtccag
aactactatggagagttgatcatactactggggaaggccatctcctgtgttcctcctgag
gactccaccctcctggccaggtacttctacctgcgcggcttcatgaacacgctgtgttcc
aagcgtcttgacgccctcagcgacttccagaacctctacaagacggacatcgagatcttc
cccaccgacctggtaaaggcgctagtggactcgctgcagaaggacgagttctcccaggtg
gaccggcggccagagctcaagcggctcatcttcaaggtgaagacagacaacgagatggtg
ctggtccaagctgacgaccatgtgaagaagttccagctccctaagacccacatgctgcag
gaggactttgtgaagcgcatccaggagtctgggattgtgaaagatgtcgccaccatccat
aggctgtttgaggccctcactgtggggcaacagaagcagattgacccagaggtgttccgt
gtgttctacaccttctggaaggagacggaggtggaggcccaggatgttcacctgccagct
gaggtcatggagcacctggacaacaacgagtgtgtctacaagctgtcctgctccgtcaaa
accaaccagggagtgggtaagatcgccatgacacagaagaggctcttcctgctcactgac
gggaggcctgggtttatcgagatcaccaagttcagagacataaaggaggtgaaaatctcc
tttgctcctttcctgctgctgaggatcccgtctctgaagatcaagtgcagtctgaggaag
gaggtgtttgaggccaacctgaagtctgcgtgtgacctgtggaatctcatggtcagagag
atgtgggctgggaggacgatggcagacgaccacaaggatcctcagtacatgcagcaggct
ttgactaacgtcttgctcatggatgctgtggttggctgccttcagacccagaaggccata
tttgccgcctccaaactggcatactttgacagagtgaaacatgaagttcctgtgatggtt
ccaaagacaacattggagacgttgaaacacaagatcaatccatcactagacctcccagcc
ccacagactgtgcatgtcttactctacacaccaggccagttgagttactcggaggcagac
ggagatgggaaccccaagctgtggtgtgccctcagtggtgggagggtggttgtgtttgat
gcagccagctggtccatgcagcagaactgtgttcaagtgggatcctcccaactgaactgc
atgctgggattggaccaggatcaagtatggattggctcccaggattccatcatttacata
attgacacatgtctgtgcatgtcctgctctgtttggaccacaatcaggcttctacatggt
gcttgttttaatccaactgtccctctcctcccccccagacagacatactcctgtagtgcc
gatggaacagtcattctgtgggacctctcaacactaaaagtgaaaaagcagtttcaactg
acctgtgataggcttatgtccattcagctcttcaatggaacactgtggtgctgtgccaga
gactgcatcgttgaactgaggaagaacggaaccccacatcgtaagatgacacttcctgag
gatctacggagcatgtccactgagttcagcagcctcatcctcttcttagagaggggccag
ttgtggacgagctgttctgattctgacgagctctgtctctggcactgtaaagacctgacc
aagcctttcctgagggtgcggctacagaattgtacaggggtcaactgtatgatcaaggtt
aagaatcagatctgggttggctgcagcgggccgagccctgaccagtgcaggatgagtggg
aagatctacatagtggacacagagagccacagtgtagagaaggagctgatggcccacaca
gacagtgtccaggcactgtgctctgcagagggccgctatgtactcagtggctccgcctgc
caggatggcaaaatcgccatttggaaggttgagtag
DBGET
integrated database retrieval system
