Oncorhynchus tshawytscha (Chinook salmon): 112243944
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Entry
112243944 CDS
T05605
Name
(RefSeq) glycine receptor subunit beta
KO
K05196
glycine receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112243944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112243944
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112243944
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
112243944
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glycine
112243944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
PIG-P
DUF3267
Motif
Other DBs
NCBI-GeneID:
112243944
NCBI-ProteinID:
XP_042172930
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MELMIVILLLTLAQSAESGGKPAKKVKKGKQVICPSQLSAEEIAQVPANSTSNILNRLMV
TYDSRIRPNFKGVPVEDKINMFINSFGSIQETNMDYRVNIFLRQRWNDPRLKLPADFKGE
ALTVDPKIFQCLWKPDLFFANEKHANFHDVTQDNILLFIFRNGDILISMRLSVTLSCPLD
LTLFPMDTQLCKMQLESFGYTTSDLVFMWMTDPVQMDEIALPQFDIKQQEIQYGNCTKFY
QGTGYYTCVEVIFTLRRQVGFYMMGVYAPTLLIVVLSWLSFWINPDASAARVPLGILSVL
SLSSESMSLASALPKVSYVKAIDIWLIACLLFGFASLVEYAVVQVMLNSPRRIEEEKSKM
ASKEKALREKEGKKTPSKTNTVNGTGGTPIHHVSTLQVVETRCKKVCTSKSDLRSNDFSI
VGSLPRDFELSNFDCYGKPIEVTGATGKSQAKNNKKAPPPKPVIPAAAKRIDLYARALFP
FSFLFFNVIYWSVYL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgatagttatcctcctgctaactctagcccagtctgcagagagtggagga
aaaccagctaagaaagtcaagaagggaaagcaagtcatatgtccttcacagctgtctgca
gaggagattgctcaggtaccagccaactccaccagcaacatcctcaacaggctgatggtg
acatatgactctcgcatacgacccaactttaaaggtgttccggtggaagacaagattaat
atgtttatcaacagttttggctccatccaggaaaccaacatggactaccgtgtgaacatc
ttcctgcgtcagcggtggaacgacccgaggctgaagctcccggcagacttcaaaggagaa
gcgctgacggtggaccccaagatattccagtgtctatggaaaccagacctgttcttcgcc
aacgagaaacatgccaacttccatgacgtcacgcaagacaacatcctgttatttatcttc
aggaatggagacattctcatcagcatgaggttgtcagtaaccctgtcctgccctctggac
ctcactctgttccccatggacacacagctctgcaagatgcaactggagagctttggctac
accaccagtgatctggtcttcatgtggatgacagaccccgtccagatggatgaaatcgct
cttcctcagtttgacattaaacagcaagagatacagtacggaaactgcaccaaattctat
caaggaacaggttactacacctgtgtggaggtgatctttacattaaggagacaggtgggc
ttctatatgatgggagtctacgcccccacccttctcatcgtggttctctcctggctgtcc
ttctggatcaaccctgacgcaagcgctgccagggttcctctgggtatcctgtctgtcctg
tccctgtccagtgagtccatgtctctggcgtcagcgcttcctaaagtctcctatgtgaag
gcgatagacatctggctcatcgcatgtctgctgttcggcttcgcttcactggtggagtac
gcagtggtgcaggtcatgttaaacagtcctaggcgtatagaggaggagaagtctaagatg
gcgtctaaagagaaggctctgagagagaaagaggggaagaagactccttctaaaactaac
actgtcaatgggaccggaggaacgcccattcatcacgttagcactctgcaggtggtggag
acccgctgtaagaaggtgtgtacatctaagtcagacctccgctctaatgacttcagcatc
gtgggatctctccccagagactttgagctttctaactttgactgctatggcaagcccatt
gaggttaccggggcaaccggcaaatcacaggccaagaacaacaagaaagccccgccccct
aaacctgtcatccccgctgcagccaaacgcatcgacctgtacgcacgtgctctgttcccc
ttcagtttcctcttcttcaacgtcatatactggtctgtctacttgtag
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