Oncorhynchus tshawytscha (Chinook salmon): 112243977
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Entry
112243977 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 5-like
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112243977
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112243977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
BORCS7
Motif
Other DBs
NCBI-GeneID:
112243977
NCBI-ProteinID:
XP_042162390
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All DBs
Position
LG03:complement(6111217..6115626)
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AA seq
502 aa
AA seq
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LRGAPCPPDPLAPSGSQALTLSPPVIHPHSLSHSGSTSSGTSAKFLPVPQPPQPPARPSS
PRLSISLTQSPSLWQEIPEVRNSAVFGELTNDQRRLQEVQFEVVTSEASYCRSLDIVVDH
FVKSKQLGELLTTQDRSWLFSRLADVRAISHSFLSKLEERVESDMMHFTVCDIIVRHCQR
FKKVYVPYLTNQSYQDATYQRLMDENQGFRRVVEKLERSPVCQRLPLRSFLILPFQRITR
IKLLVQNIVKRTAQGTEEEVQAIKAMKLLERLIQESNDSITQMKSIESLVSLSARVDFEC
RTLPLVSQSRRLVREGPVTEMMDFSLKETERSVYLHLFNDYLLLSLNKEGGRFTVIDHAP
VSELRAENCRVKLHSLEKNLFRLHLNKKALLLSTDTQGDKLRWISAVSRPHPVIDYSAEQ
DFTQMQCVRAFVAHQPDELSLEKAEVILVHQQSSDGWVEGTRLSDRHRGWTPESHLETIA
SLRVRQRNLLDALKITTATAAV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ctacgaggggctccctgtccccctgaccccctcgctccctccggctcgcaggcccttacc
ctgtctcccccagtcatccacccccactctctgtcccactctggctctacctccagtggc
accagtgccaagttcctacccgtaccacagccaccccagcccccggccaggccttcctct
ccccgcctctccatctccctcacccagtcccccagcctgtggcaagagatccctgaggtc
aggaacagtgctgtgtttggggagctgactaacgaccagagacgcctgcaggaggtgcag
tttgaggttgtaacttcagaagcgtcgtactgtcgtagtctggatattgtggtggatcac
tttgtcaagtctaagcagctcggggagctgttgactactcaggacaggagctggctgttc
tccaggctggctgatgtccgagccatcagccacagttttctgtcgaagctggaagagagg
gtagaatctgatatgatgcacttcaccgtgtgtgacatcatcgttcgccactgtcaacgc
ttcaagaaggtctacgtgccctacctcaccaaccaatcatatcaggatgccacttaccag
agactcatggatgagaaccaagggttcaggcgggtagtggagaagttggaacgcagtcca
gtgtgtcagcgtcttcctcttcgctccttcctcatcctccccttccagaggatcacacga
atcaaactccttgtgcagaacattgtgaagagaacagcccaaggcacagaggaggaggtc
caggccatcaaagctatgaagctactggagaggttgatccaggagagcaatgacagtatt
actcagatgaagagcattgagtcgcttgtctctctcagtgccagagtggactttgaatgc
aggactctccccctggtcagtcagtctcgtaggctggtgagagaggggccggtgactgag
atgatggatttctctctgaaggagacagagaggagtgtctaccttcacctcttcaatgac
tacctgctgctgtcgctgaacaaagaagggggcaggttcacggtgatagaccatgctcca
gtgtcagaactgcgagctgagaactgtcgggtcaaactgcactctctagagaagaacctt
ttccgcctccaccttaacaagaaagccctgctacttagcaccgacacacaaggtgataaa
ctgcgttggatctcagcggtctccagaccccatcctgttattgactactctgcagaacaa
gacttcacacagatgcagtgcgtccgagccttcgttgcccaccaaccagatgagctgtcc
ctggagaaggctgaggtcattctcgtccaccagcagagcagcgacggttgggtggagggg
accaggctgtcagacagacacagaggatggactcctgagtcccatttggaaaccatagcc
agcctcagggtccgacagcgcaacctgctggatgctctaaagattaccacagccacggct
gcagtatga
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