Oncorhynchus tshawytscha (Chinook salmon): 112244381
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Entry
112244381 CDS
T05605
Name
(RefSeq) collagen triple helix repeat-containing protein 1-like
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112244381
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112244381
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
112244381
NCBI-ProteinID:
XP_042165701
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Position
LG03:10644494..10653185
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AA seq
229 aa
AA seq
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MVSTLTRLLLLTCVILPFNGAEKLRKALDRKDVEYEKYNSCPQGPAGTPGREGNPGTNGI
PGTPGIPGRDGIKGEKGECVSEVFEEPWKPNYKQCAWNSLNYGIDLGKIADCTFTKLRSD
SALRVLFSGSLRLKCKTACCQRWYFTFNGAECTGPLPIEFIIYLDQGSPELNSTINIHRT
SSVEGLCEGIRAGLVDVAIWVGTCADYPRGDASTGWNSVSRVFIEELPK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggtatcaactctaactcgtctgctgctcctcacctgcgtgattctacctttcaatgga
gcagagaaattgagaaaggcacttgacaggaaggatgttgaatacgaaaagtacaacagc
tgcccccagggtccggctggcacccctggaagggagggtaaccctggcaccaatggcatc
cctgggactcctggcatcccggggcgcgatggcatcaagggggagaaaggagagtgtgtg
agtgaggtgtttgaggagccatggaaacccaactacaagcagtgtgcctggaactcactc
aactatgggatcgacctgggcaaaatagctgactgtacattcaccaagctgcgttcagac
agtgccctgcgtgtgctcttcagcggctccctgaggctgaagtgtaagacagcctgctgc
cagcgttggtacttcaccttcaacggagctgagtgtacaggacctctgcccatcgagttc
atcatctacctcgaccaaggcagccctgagctcaactccaccatcaacatacacagaacc
tcatctgttgaagggttgtgtgaggggatccgggcaggcctggtggacgtggctatctgg
gtggggacctgtgctgactaccccagaggagatgcatctacagggtggaactctgtatcc
agggtcttcatagaggagctgcccaaatga
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