Oncorhynchus tshawytscha (Chinook salmon): 112244446
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Entry
112244446 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112244446
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112244446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
Ig_2
LRR_9
ig
Ig_C17orf99
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
112244446
NCBI-ProteinID:
XP_042173598
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTVLVSSRMVSGEAGGHSYLVACWQPILVLMLGTVLSGSTTGCPSRCECNAQERSVVCHR
RRLASFPEGIPIETKLLDLSKNRLKSLGPEEFINYPQLEELQLNENNISSMEPGAFSNLV
GLRTLGLRNNQLKLIQLGVFTGLSNLTQLDISENRIVILLDYMFRELYNLKALEVGDNDL
VFISHRAFHGLSSLEQLTMERCNLTSVPTEALSHLHNLLSLRLRHLTVNAVRDYSFKRLE
RLRVLEISYWPYLDTMTSKCLYGLNITSLTITNCNLTAIPYQAIRHLGHLLFLNLSFNPI
HTVEGNKLHNLMRLQAFHLVGGRLATIEPYSFRGLNHLRVLNVSSNSLSTLEESVFHSVG
NLETLALYGNPLACDCRLLWVFRRRWRLNFNRQQPSCSLPEAVQGKEFKDFPDILPSDSF
TCQKSRIQDHKALQRHVDEGTTVHYTCQADGDPAPVIMWLSPKKQFITTKSVGRLSVSPE
GTLEVRYAQIQDNGTYLCIASNAAGNDTKPAHLHVHSYSPNWPHQPNKTFAFISNQPSED
GANGTLAQVPFPFDVKTLIIATTMGFISFLGVVLFCLVILFLWSRGKGNVKPNIEIEYVP
RKAEAGESSPTGDAPRKFNMKMM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcctggtaagcagtagaatggtgtccggggaggcaggtgggcacagctacctg
gtggcgtgctggcagcccatcctggtcctaatgctgggcactgtcctctccggctccacc
accggctgcccgtcccgctgtgagtgtaatgctcaggaacgttccgtggtgtgccatcga
cggaggctggcctcgtttcccgagggcatccccatcgagacgaaactactggacctcagc
aagaaccgtctgaaaagcctggggcctgaggagttcatcaactacccacagctggaggag
ctgcagctcaatgagaacaatatctcttccatggagcccggggcttttagcaaccttgtc
ggcttgcggactctggggctgcgcaacaaccagcttaagctaatccagttgggagtgttc
acaggcctcagcaacctcacccagctggacattagcgagaacagaattgtcatcctgctg
gactacatgttccgggagctgtacaatctgaaggctctggaagtgggcgataacgacctg
gtgttcatctctcaccgagcgttccacggcctcagcagcctggaacagctgaccatggag
cggtgcaacctgacctctgtgcccactgaggccctgagccatctgcacaacctgctgtcg
ctgcgactacgccacctcaccgtcaatgccgtcagggattactccttcaagaggctggaa
cgcctgagggtgttagagatctcctactggccctacctggacaccatgacttccaaatgc
ctgtacggcctcaacatcacctccctgaccatcacaaactgtaacctcaccgccatccct
taccaggccatccgacaccttgggcaccttctctttctcaacttgtcttttaatcccatt
cacacggtggaggggaacaagctgcacaatctaatgaggctccaggccttccacttggta
ggagggagattagccacaatcgagccctactccttccggggcttgaaccatctccgagtc
ctcaacgtatccagcaatagcctgagcaccctggaggaatctgtgtttcactccgtgggg
aacctggagaccctggcactgtacgggaacccactggcctgcgactgccgactgctctgg
gtcttccgtcgccgctggaggctcaacttcaaccggcagcagccctcctgctctttgccc
gaggccgtgcagggcaaggagttcaaagacttccccgacatcctcccctccgattccttc
acctgccagaagtccaggatacaagaccacaaggcactgcagaggcacgtagacgagggc
acaacggtccattacacatgccaggccgacggcgacccagcccccgtgatcatgtggctg
tcccccaagaagcagtttatcaccaccaagtccgtggggcgtctcagcgtgtcccccgag
ggcacgctagaggtgcgctacgcccagatccaggacaacggtacctacctgtgcatcgcc
agcaatgccgcagggaatgacaccaagcccgcccacctgcatgtgcacagctactcgccc
aactggccgcaccagcccaacaagacgtttgctttcatctccaaccagcccagcgaggac
ggggccaacgggaccctggcccaggttcccttcccattcgacgtgaagactctgatcatc
gccaccaccatgggatttatctcgttcctcggcgtcgtcctcttctgtctcgtcatcctc
ttcctctggagcagaggaaaaggcaacgtcaagccaaacatagagattgagtatgtaccg
cgtaaggcggaggcaggtgagagtagtccaaccggcgatgcgccacgtaaattcaacatg
aaaatgatgtga
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