Oncorhynchus tshawytscha (Chinook salmon): 112244468
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Entry
112244468 CDS
T05605
Name
(RefSeq) G-protein coupled receptor family C group 6 member A-like
KO
K04622
G protein-coupled receptor family C group 6 member A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
112244468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112244468
G protein-coupled receptors [BR:
otw04030
]
Metabotropic glutamate receptor family
Calcium-sensing
112244468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_3
ANF_receptor
NCD3G
Peripla_BP_6
DUF3112
Motif
Other DBs
NCBI-GeneID:
112244468
NCBI-ProteinID:
XP_042162589
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All DBs
Position
LG03:complement(13254376..13265968)
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AA seq
930 aa
AA seq
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MEPMGDVLHLLVILSLLEKGNAKVGHFKAAGATAPGDIIIGGLFPIHEGVEESPNISAPH
EPHCVRFNMVGFTQALAMIHAVESANRYPVLTTLGISLGYRIHDSCSDVTTALRASADFT
QEPNTGANTSTCSPPIMAVIGASSSEISIAVARQLNLELIPQISYASTAIILSDKIRFPA
FLRTVPSDLYQTRAMVQLLSDSKWTWVGVVTTDGDYGRSALDSFVSQATASGICVAFKEI
LPNSLTSPDGESAFRQAAATLLGNPNVKVVVSFARPIHMMYLYQELRVWGSLLGEKVWVA
SDSWSSSKEVLGEMDLLDIGHVVGFSFKRGNLAPFHRYLMNLININDVIGNNSFLKEFYS
LLNESGDPGCGSSFTIPAEILLNNSDAKVVFSVEMAVSAIAHAVADICSKKDCKTPGTVQ
PWEVTTAHVLETLRGSRFELEGKSYSFDQKGDINLGYDVTLWRSVRGVINIHDIVAVYHP
INNSFSYTSGNTNNLTDLRDVVSVCSPSCEPGKFKKFAQGQHTCCYECINCTENHYSNNT
DMDQCLSCETKREWSLEGSSGCTHKTLEFFSWQDGFAEVLLALAALGIILVLLVGALFLH
HHQTPVVRAAGGPLSQIILLSLVGSFVSAVFFVGHPSSLQCKVRQVLFGLSFTLCVSCIL
VKSLKILLAFQLNPDRKNVLRRLYQPYAIICLCVALQVITCTLWLVLQSPREKATVFTTT
VLAECDEGSQVAFGVMLCYIAVLALVCFACAFKGRKLPQKYNEARFITFSMLLYLMSWLI
FVPVYVTTSGKYLPAVEMVVILISNYGILSCHFFPKCYVILFKKEHNTKSAFMKNIYEYS
RKGITVSSSVSEISVSQTEGYRISHPYSISSPSFFMSPPPIEPTAPQNCWSVDQNIQSIA
TATHCTVVDHGVFVTGQLTRPHRLRRSMSL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaacccatgggtgatgttctccacctgttagtcatcctgtccttgttggagaagggc
aatgccaaagtgggacacttcaaagcagcaggagccacagcaccaggagatatcatcatt
ggagggctgtttcccatccatgagggagtagaggaatcccccaacatctcagcaccccat
gaaccacattgtgtcaggttcaacatggtcgggttcacccaggcattggctatgatccac
gctgtagagtcggccaacagataccctgtcctgactacactagggatctctctggggtac
cgtatccacgactcctgctctgatgtcaccaccgctctgagggcctcagctgacttcaca
caggagccaaacacaggagccaacacctccacctgttccccacccatcatggccgtcatt
ggggcctcttcctctgagatttccatcgctgttgcccggcaactcaacctggagctcatt
cctcagatcagttacgcctccactgccatcatcctgagtgacaagatccgtttccctgca
ttcctgaggaccgtacctagcgacctgtaccagacacgggccatggtccagttgctcagc
gacagcaaatggacctgggtcggcgtggtcacaacggatggagactacggccgctctgcc
ctggacagcttcgtctcccaggcaaccgcctcagggatttgtgtggccttcaaagagatc
ctccctaactcgctaaccagtcctgacggcgaatcagcattcagacaagccgccgccacc
ctcctcgggaaccccaatgtcaaggtggtggtatcgttcgccaggcctattcacatgatg
tacctgtaccaggagttgagggtttgggggtcgcttctgggggagaaggtgtgggtggcc
agtgatagctggtcctcgtccaaagaggtcctgggagagatggacctcctagatatcggc
catgtggttggcttctccttcaaaagagggaaccttgctcctttccatcgctacctgatg
aatctgattaacatcaatgatgtcataggaaacaactccttcctaaaggagttctactca
ctgctaaacgagtcgggagatcccgggtgtgggtcctccttcacaatcccagcagagatc
ctgctaaacaacagcgatgcaaaagtggtcttcagtgtggagatggctgtcagtgccatc
gcccatgcagtggctgatatctgcagcaaaaaggactgcaagacaccaggcacggtccaa
ccctgggaggtaactactgcacatgtgcttgaaaccctgaggggcagtcgctttgagctg
gaggggaaaagctacagttttgaccagaaaggagacatcaacctgggctatgatgtaacc
ttgtggaggtctgtgagaggggtcatcaacatccatgacattgtagctgtgtaccatcca
atcaacaacagcttcagctacaccagtggaaacaccaacaatctcactgacctgagggat
gtggtgtctgtgtgctcgcctagctgtgaacctgggaagttcaagaagtttgctcagggt
cagcacacctgctgctatgaatgcatcaactgcactgagaaccactactccaacaacact
gacatggaccagtgtctctcttgtgagacaaagagagagtggtccctggaagggagctct
gggtgtacccataagaccctggagttcttctcctggcaggatggctttgcggaggtgctg
ctggcgctggcggccctgggcatcatcctggttctcctggtgggggctctcttcctacac
caccaccagacccccgttgtgagggctgccggggggcctctctcccagatcatcctgctc
tctctagtgggaagttttgttagtgctgtgttctttgtaggtcatcccagcagcctacag
tgtaaggtgcgtcaggtgctgtttggcctcagcttcaccctgtgtgtttcctgcatcttg
gtcaagtccctgaagatcctgctggccttccagctcaaccctgaccggaagaatgttctc
cgccgcctctaccaaccgtatgccatcatctgtctctgcgtggccctacaggtcatcacc
tgcaccctgtggctggtcctgcagagcccccgggagaaggccacggtcttcaccaccact
gtgttggccgagtgtgacgaaggctcccaagtggcgtttggtgtgatgctgtgctacatc
gctgtcctggcgctcgtatgttttgcctgcgcgtttaaaggccgcaagctgccacagaag
tacaacgaggccaggttcatcaccttcagcatgctcctctacctgatgtcctggctgata
tttgtgcccgtctatgtgaccacctctgggaagtacctgccagcagtggagatggtggtc
atcctcatctccaactatggcatcctcagctgtcatttcttccccaagtgctacgtcatc
ctcttcaagaaggagcacaacaccaagagtgccttcatgaagaacatctatgagtattcc
agaaagggcattactgtctctagctctgtctctgagatttcagtctctcagacagaaggg
tatcgaatcagtcacccgtactccatcagttcaccttccttcttcatgtctcctccacca
atagaaccaacagcacctcagaactgctggtccgttgaccagaacattcagagcattgcc
actgcaacccattgcaccgtcgtagaccatggagtgtttgtcacaggtcagctgactcga
ccacaccgtctgaggagaagcatgagcctatga
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