Oncorhynchus tshawytscha (Chinook salmon): 112244515
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Entry
112244515 CDS
T05605
Name
(RefSeq) adhesion G protein-coupled receptor B1
KO
K04596
adhesion G protein-coupled receptor B1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04115
p53 signaling pathway
otw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112244515
09143 Cell growth and death
04115 p53 signaling pathway
112244515
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112244515
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112244515
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112244515
Peptidases and inhibitors [BR:
otw01002
]
Mixed peptidases
Family P2
112244515
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Others
112244515
G protein-coupled receptors [BR:
otw04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
112244515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AGRB_N
7tm_2
TSP_1
GAIN
TSP1_spondin
TSP1_ADAMTS
GPS
HRM
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
112244515
NCBI-ProteinID:
XP_042165784
LinkDB
All DBs
Position
LG03:complement(11911968..11994091)
Genome browser
AA seq
1592 aa
AA seq
DB search
MTTTLFSSLPGHLVNPQVPLSSSLLLLLLLQLFSQCPAAPSGPESDTCSTLVQSRFFGHF
LSSSTFPMAPCSWTLQNPDPRRYTIFIKVTKPTSTTDCIPRQLRTFQFDSFLETTRTYLG
MESFDEVVKLCDSSSPVAFLEAGKQFLQMRKGPPLAGMTVTTPNASEDGEFKTEYLVVGK
RNPSMAACQMLCQWLEDCLASSTSNRPCGIMQTPCQCWEPPPPPQLSEGDGCYRNGFYLE
NCLPSADEKSDTDSNSGWSVWAEWKECSSDCGGGVQTRSRTCQSPPEETYLCEGVVEEGR
PCNPQPCSGKGRHLTRSQSLRSVDSRKRDGGGGEVDKTRGGGGGQQAPQTVDQTASGEEW
SSWSVCSATCGESWQSRTRFCVSSSYSTQCSGPLREQRPCNNSAVCPVHGTWDEWSPWSL
CSSTCGRGYRDRTRSCKPPQFGGDPCMGPEKQTKFCNIAVCPVDGVWNEWANWGSCSASC
SNGTMQRIRECNGPSYGGSECRGEWIETRDCFLRECPVEGKWHPWTSWVGCTKTCGGGSQ
HRQRICYGPFFGGENCPGDREEVRRCNEKRCPEPHEICAEENFSNVVWKMTPAGDTAAVR
CPPNANGLILRRCTLDDEGIAYWENPTYMKCISNDYRSIQTLTREHLSKAQRGLVGDGVS
EVMTKLRVTSSDGTSYSGDLLAIVDVLKNMTEIFRRAYNSPSNADMRNFVQSVSNLLMEE
NRERWEEAQLLGPNIKELFRLVEDFVDVYGLRMKDFQDMVEVTDNLVLSIHKRPVAGNAD
ISFPMKGWKGMMDWARSSEDRVTVSKNILSTGKPDTDDLSAFVTGIVLYRNLGSILSLQR
NSTVLNSKVVSVTIKPTPGSLSTPVEVQFSHLYNGTTNQTCISWDETLSLFSRSSSLLGS
WSARGCRAVPVDSLRTKCVCNRLSTFAILARLNPDMNMDKMQLPSVTLMVGCGVSSLTLL
LLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTRNKVICTLVAAFLHFFFL
SSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVAVSVGFTKAKGYGTVNYC
WLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSKDGITDMKLKERAGASLWSSCVVL
PLLALTWMSAVLAITDRRSSLFQILFAVFDSLEGFVIVMVHCILRREVQEAVKCRVVDRQ
EDGNGDSGGSFQNGHAQLMTDFEKDVDMACRGGKSTGKKKSTLKRSSLQGDEKTSSQPLT
LQKGSNFNTMPASMAKVHLQNVADYPSHTLTLRREKGGATKGISTELPGAKSIYICDGEL
FKQLDGELSPQGTGEAGGPEGTGYIILPNNNNTGTLGRPGKGSKEDTTAKYNISIEQQMP
QTRLIHLANSAGVEGVPGFALKSLPADLVSVSCSERESPVHNMQNVSGESHMTNSMCEQG
DSGNSGMMSKSETVSTLSMSSLERRKSRYAELDFEKIMHTRKRHQDMFQDLNRKIHSADQ
DRASPPGDGKAGKRWSVSSAGSDKTIMSDKQQTPSKRAWEGIRKTQSPPSWMRKDLEPLA
ASPLELQNVEWEKASATIPLVGQELMDLQTEV
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccactcttttttcctcattacctgggcacctggtgaacccccaagtccccctg
tcatcatcgttgctgcttttgctgctgttacaactgtttagtcagtgccctgctgctccc
tcagggcctgagtcagacacctgctccactctggttcagagccgattcttcggccacttc
ctgtcctcctccactttccccatggcaccctgctcctggaccctgcagaacccagacccg
cgccgctacaccatctttatcaaggtaaccaaacctacctccacaacggactgcattccc
cggcagctccgcacattccagtttgactcgtttctggagaccacgcgcacctacctgggc
atggagagcttcgacgaggtggtcaagctgtgtgactcttcatcccctgtggcctttctg
gaggctgggaaacagttcctacaaatgaggaaagggccgccactggccggcatgacggtc
accacccctaacgctagcgaagatggggaatttaagacagagtacctggtggtggggaag
cgtaaccccagcatggcagcgtgtcagatgctgtgccagtggctggaggactgcctggca
tccagcacctctaacaggccctgtggcatcatgcagaccccctgccagtgctgggagcct
cctcctcctccacagctcagcgaaggagatggatgctacaggaatgggttctatctggag
aactgcctacccagtgccgatgagaagagtgatactgacagcaacagtggctggagtgtg
tgggcggagtggaaggagtgcagcagtgactgtggtggtggcgttcagacccggagccgt
acctgtcaatctcccccggaggagacatacctgtgtgagggagtagtggaggagggaagg
ccctgtaaccctcagccctgcagtggcaaaggccgtcatctcactcgcagccaatcactt
cgctccgtggacagccgcaagcgtgatggcggcggtggcgaggtagacaagacgcgaggc
ggtggcggcggacagcaggccccacagacagtggaccagactgcgtcaggtgaggagtgg
tcgtcgtggagtgtgtgttcggccacatgcggtgagagctggcagagccgcacgcgtttc
tgtgtctcctcctcctacagcacccagtgcagcggcccgctccgagagcagaggccctgc
aacaactctgccgtctgtccagtgcatgggacttgggatgagtggtcgccatggagcttg
tgttcgtcaacctgcggccgtggttaccgggatcgcacgcgcagctgcaagccccctcag
tttgggggagacccctgtatggggccggagaagcagaccaagttctgcaacatcgctgtc
tgcccagttgatggggtgtggaatgagtgggctaattggggttcatgctctgcgtcctgc
tccaacgggaccatgcagcggatcagggagtgtaacggaccttcgtacggaggatcagag
tgtcgcggggagtggatagagaccagagactgcttcctacgggagtgcccagtggagggg
aagtggcatccttggacgtcgtgggtgggctgcaccaagacatgtggcggggggagccaa
cacagacagaggatttgctatgggcccttctttgggggtgaaaattgtcctggagatcgg
gaggaggtgcgacgctgcaatgagaagaggtgtccagaacctcatgagatctgtgcagag
gagaacttctccaatgtagtgtggaaaatgactccagcaggggacacagcggccgtacgc
tgcccacccaatgcaaatgggctgatcctgaggcggtgcaccctggatgatgagggaata
gcctactgggagaaccccacttatatgaagtgtatctccaatgactaccgcagcatccaa
acactgactcgggaacacctgtccaaggcccagcgggggcttgtgggggatggagtttca
gaggtgatgaccaagctcagggtgacatccagtgatgggaccagctacagtggagacttg
ctggccatagtggacgtactgaaaaacatgacagagatcttcagaagggcctacaacagc
cccagcaatgcagacatgagaaactttgtccagtcagtcagtaacctgctgatggaggag
aacagagagagatgggaagaagcacaactgttgggtcctaacatcaaggagctgttccgg
ttggtggaagactttgtggatgtctacggtcttaggatgaaagacttccaggacatggtc
gaggtcacggataacttagttctgtccatccacaagcgtccggtggcaggtaatgcagac
atcagcttccctatgaagggctggaaggggatgatggactgggcccgcagctctgaggac
agagttactgtctccaagaacatcctctccacaggcaagccagatacagatgacttgtca
gcgtttgtcaccgggatcgttctctacagaaacctgggcagcatcctatctctacagaga
aacagcaccgtgctcaactccaaggtggtgtctgtgaccatcaagcccaccccaggatcc
ctctctaccccggtggaggtccagttctcacacctttacaacggcaccacaaaccagacc
tgcatctcctgggacgagacgctctctctcttttcccgcagctcttcgctgctcggatcg
tggtctgccaggggctgcagagccgtgcctgtcgactcattgagaaccaaatgcgtgtgt
aacagactctcaaccttcgccattttagcacggctaaatcctgacatgaacatggataaa
atgcagcttccctctgtgacgctgatggtgggctgtggagtctcctctctcaccttgctg
ctcctcatcatcatctatgtgtcggtctggaggtacattcgctccgagcgctccgtcatc
ctcatcaacttctgcctctccatcatctcctccaacgccctcatcctcattggtcagacg
cagacacggaacaaggtgatctgcacgctggtcgctgctttcctgcatttcttcttcctg
tcgtctttctgttgggttctgacagaggcgtggcagtcatacatggccgtgactggccgg
ctgaggaaccgcatcatccgcaagcgattcctgtgtctgggctggggtctacctgctctg
gttgtggcagtctctgtgggtttcaccaaagctaagggatatggcaccgtcaactactgc
tggctgtctctggaaggtggtctgctttatgcgtttgtgggaccggctgccgctgtagtc
ttggttaacatggttatcgggattctcgtatttaacaaactggtgtccaaagacggcatt
actgatatgaaactgaaggagagggcaggggcgtcactgtggagctcctgtgtggttctg
cctctcctggccctcacctggatgtctgctgtcctggccatcaccgaccgccgctcctcc
ctcttccagatcctgttcgctgtgtttgattcactggaaggcttcgtcatcgtcatggtg
cattgcatcctgcgccgagaggttcaagaggcagtgaagtgtcgggtagtggaccgccag
gaggacgggaatggagactcagggggatctttccagaacggacacgctcagcttatgact
gatttcgagaaagacgtcgacatggcttgcagaggaggtaagagtaccggcaaaaaaaag
agtactctgaagcgttcctctctccagggtgatgagaagacatcctcccagcccctgacc
cttcagaagggctctaacttcaacaccatgcctgccagtatggccaaggtccacctccag
aatgtggcagactaccccagtcatactctcaccctgcgcagggagaagggtggcgccacc
aagggcatcagcaccgagctgccgggagccaagtccatctacatctgtgacggggagctc
tttaaacagctggatggggagctgtctccacaggggacaggggaggccggggggcctgag
ggcacagggtacatcatcctgcctaacaacaacaacactggcaccctggggcggcccgga
aagggcagcaaggaggacacgacggccaagtacaacatcagcatcgagcagcagatgccc
cagaccaggctcatccacctggccaactcggcgggggtggagggcgtcccgggtttcgcg
ctgaagagcctgcctgcagacctggtcagtgtctcctgctcagagagggagtcgcccgtc
cacaacatgcagaacgtctccggagaatcccacatgaccaacagcatgtgtgaacagggt
gattctgggaactctggaatgatgtccaagagcgagaccgtgtccacgctctccatgagc
tccctggagagacgaaaatctcgctatgcggagctggactttgagaagatcatgcacaca
cggaagcgtcaccaggacatgttccaggacctgaacaggaagatccacagtgcagaccag
gacagggcgtctccgcctggcgatgggaaggcagggaagaggtggagtgtgtcctcagca
ggcagcgacaagaccatcatgagtgacaagcagcagacacccagtaagagagcctgggag
ggcatcaggaagacccaatctcccccgtcgtggatgaggaaggacctggagcccttggcg
gcctctcccctggagctgcagaacgtggagtgggagaaggccagcgccaccatccctctg
gtgggacaggagctcatggacctgcagacagaggtgtga
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integrated database retrieval system
