Oncorhynchus tshawytscha (Chinook salmon): 112244634
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Entry
112244634 CDS
T05605
Symbol
clstn2a
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112244634 (clstn2a)
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Cadherin related
112244634 (clstn2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
SpoIIIAH
CobW_C
AmpE
Chordopox_A13L
DUF7502
Motif
Other DBs
NCBI-GeneID:
112244634
NCBI-ProteinID:
XP_042164002
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All DBs
Position
LG28:30731193..31009153
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AA seq
936 aa
AA seq
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MEMLGVPFALVWVVLGLSCILAGKVNKHKPWIETSYHGVITENMDTVLLDPPLVALDKDA
PVPYAGEICAFKIHGQEAPFEAVVLNRTSGEGVLRAKGPVDCETQKEYTFIIQAYDCGAE
ASGASWKKSHKAVVHIQVDDVNEFSPVFREPMYHASAMEGKIYDSILQVEAWDQDCSPQY
SQICNYDIVTSNTPFAIDRNGNIRNTERLSYDKKQRYKVMVTAFDCGQKRATESVAVHID
VKPVCKPGWQGWNKQVDYEPGTGSKQLFPKMHLETCDGPLSAVRAMVELQTSHIGKGCDR
ETYSEKSMQKLCGAASGSTDLLPAPSISTNWTASLLTDSGRDSDLIFNFDGRQAANVPEQ
VVPQNLTDQFTIATWMKHGPSPGLRAEKETLLCNSDKTEMNRHHYSLYVHNCRLVFLLRR
DFTQVDTFRPAEFHWKLEQICDKEWHYYVINVEFPAVTLFVDGVTYEPYLVTDDWPIHPS
SIDTQLTVGACWQGGEVSTPRFTQFFRGSLSGLTIRPGRIETQKVISCLQACKEGLDIHS
LESLGKDIKFHFNPAQSVLVMEGEDLESVNTAMAKVSYINSRQFPTAGLRQLHITTTVQC
FGEDICISIPDIKALVMVLPPSEPRITIAGSDQLVRPAADLRGSMGVAPFKELRITSTVT
KGDGVPFSAVYRPGVLEAMHNLDYCDVLVIGEELNPEQESLEIHHSSLMGKHLDATNSTS
GISIYGVDSMAHYEEALRQVRYRNWRPATLSNRRFRLTCSELNGRYTSNEFNLEVSLVHN
AAPVEHVNHMAVQSQYMRSVHHPLMVHSVNSHISGTPPAATVVVVICIAALVCIVVLGIY
RLHSTHQDSSKSEEDGAKDPEMDWDDSTLTITVNPMENVGEPQTVEEVNEEEEDEQAGDI
TSAESDDSDETEEEEDDEKESKLKSKLEWDSSSITY
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcttggggtgccattcgcgctggtttgggtggttctggggctgtcctgcatt
ctcgctggaaaagtgaacaagcacaagccgtggatcgagacgtcgtaccatggggtgatc
acagagaacatggacactgttctgctggaccctcccttggtggccctggataaggatgcc
cctgtcccctacgcaggggagatctgtgcatttaagatccacggacaggaggccccgttc
gaggcggtggtcctgaacaggacgtcaggggagggggtcctgagggccaagggcccggtg
gactgtgagacccagaaggagtacaccttcatcatccaggcttacgactgtggggcggag
gccagtggagccagctggaagaagtcacataaggcagtggttcacatccaggtggatgac
gtaaatgagttctctcctgtgttccgggagcctatgtaccacgcttcagcaatggaaggg
aagatctatgacagcatcctgcaggtagaggcctgggaccaggactgttctccgcagtac
agccagatctgcaactatgacatcgtcacctccaacacgccctttgccatcgaccgcaac
ggcaacatcagaaacacggagcgtctgagctacgacaagaagcagcgctacaaggtcatg
gtgaccgccttcgactgcggccagaagagggcgacggagagtgtggcggtgcacatcgac
gtcaagcctgtctgcaaacctggctggcaaggctggaacaaacaagtggactatgagccc
gggacaggaagtaagcagctgtttcccaagatgcacctggagacttgtgatggcccattg
tcggcggtgagagccatggtggagctgcagaccagccacattgggaagggctgcgaccga
gagacctactccgagaagtccatgcagaaactctgtggtgcggcgtccggcagcacggac
ctcctccccgcccccagtatctccaccaattggacggcttcactgctgacggacagcggg
cgggacagtgacctcatcttcaacttcgacgggcggcaggcggccaacgtgccagagcag
gtggttccacagaacctgactgaccagttcaccatcgccacgtggatgaaacacgggccc
agccccggtctgagggccgagaaagagaccctgctctgcaactccgacaagaccgagatg
aaccggcaccactactccctgtacgtccacaactgccgtctggtcttcctactcaggaga
gacttcacccaggtcgacaccttccgccccgcagagttccactggaaactggagcagatc
tgtgataaggagtggcactactacgtgatcaacgtggagtttcctgccgtgacgctcttt
gtggatggcgtgacctacgaaccctacctggtgacggacgattggcccatccatccctcg
tcaatcgacacccagctgacagtgggtgcctgctggcaaggtggtgaggtgtccacccca
cggttcacccagttcttccggggcagtctgtctgggctgaccatccggccagggaggatc
gagacccagaaagtcatctcctgtctacaggcctgtaaggaaggactggatatccactca
ctggagagcctgggcaaggacatcaagttccacttcaacccagcccagtcggtgctggtg
atggagggagaggacctggagagtgtcaacacagccatggccaaggtctcctacatcaac
tcacgccagttccccacagcaggcctcagacagctacacatcaccaccaccgtacagtgt
ttcggggaggacatatgcatctccatcccagacattaaggctttagtaatggtcctgcca
cccagcgagccacggatcaccatcgctggttcagatcaactcgtcaggcctgccgccgac
ctgcgtggatccatgggcgtggcacccttcaaggagctgcgcatcaccagcactgtaacc
aagggtgacggtgtgccattcagcgcagtctacaggcctggtgttctggaggcgatgcac
aacctggattactgtgatgtcctggtaattggagaggagctcaacccggagcaagagagt
ctggagattcaccacagctctctaatggggaaacacctggacgccacgaactccacctca
ggaatatccatatatggtgtggactccatggcccattatgaggaggccctcaggcaggtg
cgctataggaactggcgcccggcgaccctgagtaacaggaggttcaggctcacctgctct
gagctcaatggacgctacaccagtaatgagtttaacttggaggttagcctcgttcacaac
gcagcacccgtagagcatgtcaatcacatggctgtccaatcccagtacatgcggtcggtg
catcatcccctgatggtgcactctgtcaattcccacatctcaggcacccctccagctgcc
acagtcgtggtagtgatctgtatcgccgccctggtgtgtatagtggtgctaggcatctac
aggctccacagtacccaccaggacagctccaagagtgaggaggatggagccaaggaccca
gagatggactgggacgactccaccctcaccatcacagtcaaccctatggagaacgtcgga
gagcctcagacggtggaggaggtaaatgaggaagaggaagatgaacaggcaggcgacatc
acgagtgcagagtctgacgacagtgatgaaacagaggaagaggaggacgacgagaaggag
agcaagctgaagagcaagctggaatgggatagctcttcgataacatattaa
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