KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112244635
Entry
112244635         CDS       T05605                                 
Name
(RefSeq) integrin alpha-8
  KO
K06584  integrin alpha 8
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04512  ECM-receptor interaction
otw04514  Cell adhesion molecule (CAM) interaction
otw04518  Integrin signaling
otw04810  Regulation of actin cytoskeleton
otw04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    112244635
   04514 Cell adhesion molecule (CAM) interaction
    112244635
   04518 Integrin signaling
    112244635
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112244635
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    112244635
   04810 Regulation of actin cytoskeleton
    112244635
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:otw04515]
    112244635
Cell adhesion molecules [BR:otw04515]
 Integrins
  Integrin alpha subunits
   112244635
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 112244635
NCBI-ProteinID: XP_042166588
LinkDB
Position
LG03:16063506..16122693
AA seq 1056 aa
MCAYRMCTFGGMLCRVVPVLWLVLSVVSGFNLHAERPAVYGGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDSTKQPYSCTQIPFDNTNNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRAVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVHGEKQTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTARGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVHFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLREEDEFRDKLTP
ISLALNYSLAPPSNLDLPPILNRYSSTFLQEQAYILLDCGEDNECIPDLQLSASMDRTEL
VVGDDNLVMLTINAVNKGEGAYETELHTLLPPEADYIGVERRIESLSKLNCEYRMVNDSR
LVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDNSKSNPVSLSLSIS
ARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQV
GWPSRFRDEHLLYALEVLTEGPISCRSNTSLNLLGLQMSSVQDTPELLGFLRNSSSPHRY
RRATSAAQPYISKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPYL
LNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVLA
MLTLAMWKCGFFDRARLPADDVSDREQLTSDQLADA
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgtgtgcttataggatgtgcacgttcggtgggatgttgtgtcgcgtggtgccggtgctg
tggctggtcctttcggtggtctcggggttcaacctgcatgcggagcgcccggccgtgtac
ggaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacatcccagccaggcatc
atagagggaggagctgtctactactgtccctatcccccaaaccccgactccaccaagcaa
ccctacagctgcacacagatacccttcgacaacaccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtgctgtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctatgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggtggacctggaagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagctgtgctcaggagagtccatggagagaaacagacacacgctgcagctgatacccat
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctgatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacgggtatgatgatgtactggtaggagcc
cctctctacatggagagagagagggagagtaagcccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagccccttctcctgacgggaacacacacc
tttggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaat
gacgtggcagtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccgcggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgtcctgtagtgtcagtggaggctgagatgatcctgactcctagaatcctg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcaaaggtgagcggtgtggggatcccagactctgtagtcttgaatgca
gagctgcaactggattggctgaaaggtgtgaggggcggagtaaaaagagttcatttcctg
gattcccatcagccccagcacacaggggtcctaactcttggccacagccgtccacactcc
tgcctgaactacacggtctacctacgagaggaggatgaatttagggataaattgactccc
atctcattggctctgaactacagtttagcccctccttccaacctggacctcccccctatc
ctcaaccgctacagcagtaccttcctgcaggaacaggcgtatattctgctggactgtggg
gaagacaacgagtgtattccagacctccagctgtctgcaagcatggaccgtacagagctg
gtggtcggggatgacaacctggtcatgttgaccataaacgcggttaacaaaggagagggg
gcatatgagacagagctacacacactcctaccccctgaggctgattacataggagtggaa
cgcaggatagagtctctatccaagttgaactgtgagtacaggatggtgaatgactccaga
ctagtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggttta
aggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacagatc
cacagttcaaacaaagacaactccaagagcaacccagtcagtctgtctctctccatctct
gccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccgttt
cctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtcaca
cacatctacgagctccataactcaggtcccagcagtattcgggaggcggagctccaggtg
ggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacggaa
ggaccaatcagctgccggagcaacaccagcctcaacctcctgggcctacagatgtcctct
gtccaggacactccagaattgttgggctttctgagaaacagtagctctcctcaccgctac
agacgagccaccagcgctgcccagccctacatcagcaagaccctgaactgcagtaacatc
atttgtctaagagttctgtgtgtggttgggcggttggaccgtggtcagagcgctgtagtc
aagatccgttcccgactctgggctcacaccttcctccagagacgtaacgacccatacctc
ctcaactccaccgtgtccttcagagtgacggccctgccctaccgcctccagccctcctcc
ttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtggcg
tttgctgttcctctgtgggtcatcatcctggccatcctactgggactgctggtcctggct
atgctaacactggccatgtggaagtgtgggttctttgaccgggcacggctgccagcggat
gacgtgtcagaccgtgagcagctgacctctgaccaattagcagacgcctaa

DBGET integrated database retrieval system