Oncorhynchus tshawytscha (Chinook salmon): 112244689
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Entry
112244689 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family G member 4
KO
K05680
ATP-binding cassette, subfamily G (WHITE), member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112244689
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112244689
Transporters [BR:
otw02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG1, 4 subgroups
112244689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
SMC_N
RsgA_GTPase
ABC2_membrane_3
AAA_13
AAA_16
AAA_29
MMR_HSR1
DUF1440
AAA_22
cobW
Rad17
AAA_28
AAA_18
nSTAND1
AAA_23
MeaB
Motif
Other DBs
NCBI-GeneID:
112244689
NCBI-ProteinID:
XP_024268195
LinkDB
All DBs
Position
LG13:complement(49680800..49710642)
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AA seq
666 aa
AA seq
DB search
MWLKGLKHTPTPPLQNGGMADSGTAVKPPEPESVSIPMEETICNGGTQEPSLLTNLKKVE
NHITEAQRFSHLPKRSAVDLEFTELSYTIREGPCWRKRGFKALLKCLSGRFCSRELIGIM
GPSGAGKSTLMNILAGYRETGMKGKILVNGKPRDLRTFRKMSCYIMQDDMLLLHLTVREA
MMVSANLKLSETMEVKKELVNEILTALGLQECAHTRTSSLSGGQCKRLAIALELVNNPPV
MFFDEPTSGLDSASCYQVVSLMKSLAXGGRTIICTIHQPSAKLFEMFDKLYILSQGQCIY
KGTVPYLIPYLKNLGLHCPTYHNPADFIIEVASGEYGDWNPVLFEAAQAGMCAIEEKEKS
CDKNDTSAVCPTKCLKDSGAIESHSFATSTWTQFCILFNRTLMTICRDQVLTHLRLMSHI
SIGVLIGLLYLNIGNDASKVFNNTGFLFFSMLFLMFGALMPTVLTFPLEMSIFLREHLNY
WYSLKAYYLAKTMADIPFQVLCPVMYCSIVYWMTDQPPEATRFLLFLALSICTALVAQSL
GLLVGAASTNLQVATFVGPVTAIPVLLFSGFFVNFDTIPKYLQWSSYVSYVRYGFEGVIL
SIYGMNRTYLYCPGKVCKFQKPEEVLQLLDVEDAKLYMDFIVLGIFFVILRFATYLVLRY
KVKSER
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaagggcctcaaacacacccctacacccccgttgcagaacggtggtatggct
gatagtggaacggctgtcaagcctcctgaacctgaatcagtcagcatcccgatggaggaa
accatctgtaatgggggaacgcaggagccttctctgttgacaaatctgaagaaggtggag
aaccacatcacagaggcccagcgtttctcccatctccccaagcgttcggcggtggacctg
gaattcacagagctctcctacaccatccgggaagggccgtgctggagaaagagaggtttt
aaagccttacttaagtgcctgtcggggaggttctgcagccgagagctgatcggaatcatg
gggccctctggggccggcaagtccactctgatgaacatcctggctggctacagggaaaca
ggcatgaaagggaagatcttggtgaatgggaaacccagagatctccgcacgtttcgtaag
atgtcctgttatatcatgcaggatgacatgctgctgctgcacctcactgtccgggaagcc
atgatggtttcggccaacttgaagctcagtgaaactatggaagtgaaaaaggaactggtg
aatgagatcctgactgctctagggctccaggagtgtgctcacactcgcaccagctcccta
tctgggggacagtgtaaacggctggcaatcgcccttgagctagtcaacaatcccccagtc
atgttctttgatgagccaaccagtggactggacagtgcctcctgttaccaagtggtttct
cttatgaaatctctagccnctgggggacgtaccataatctgcaccatccaccagcccagc
gccaaactctttgagatgtttgataagctgtacatcctgagtcagggccagtgcatatac
aaaggcaccgtcccatacctcatcccctatctgaagaacctggggctccactgccccacc
taccacaacccggcagatttcatcatcgaagtggcatcgggggagtatggagactggaat
cctgttctgtttgaggcggcacaggctggaatgtgtgccatagaggagaaggagaagtca
tgtgacaaaaatgacacatccgctgtttgtccaacaaagtgcctcaaggactcaggagcc
attgagagccattcatttgctacaagcacttggacacagttttgcattctcttcaataga
acgttgatgacaatatgtcgagaccaggtgttgacacacctaaggctgatgtcacacatc
tctataggagtactgatcggcttgctctacttgaacattggcaacgacgccagcaaggtc
ttcaacaacaccggcttcctcttcttctccatgctcttcctcatgttcggagctctgatg
cccaccgtgctcacatttcctctggagatgtcaatttttctgagggaacatctaaactac
tggtacagcctgaaggcttactatctggctaagactatggctgacattccattccaggtc
ctctgccccgtcatgtactgcagtatagtgtactggatgacagatcagcctccggaggcc
acccgcttcctgctcttcctggccctgtccatctgcacggccctggtagcccagtcacta
gggctcctggttggtgctgcctccaccaacctccaggtggccacttttgtcggccccgtc
actgccattcctgttcttctcttctcgggcttctttgtcaactttgacaccattcccaag
tacctgcaatggagctcttatgtgtcctatgtcaggtacggctttgagggggtgatcctg
tccatatacgggatgaaccgtacctatctgtattgtccggggaaagtgtgtaaattccag
aagcctgaggaggtcctccaactgttggatgtggaggacgccaagctctacatggacttc
atcgttctggggatcttcttcgtgattctccgattcgccacctacctagtgctgcgctac
aaggtcaagtcagagcgatag
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