Oncorhynchus tshawytscha (Chinook salmon): 112244710
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Entry
112244710 CDS
T05605
Symbol
pdzd3a
Name
(RefSeq) Na(+)/H(+) exchange regulatory cofactor NHE-RF3
KO
K24059
PDZ domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112244710 (pdzd3a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
112244710 (pdzd3a)
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
112244710
NCBI-ProteinID:
XP_024268223
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Position
LG13:complement(49635412..49648181)
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AA seq
542 aa
AA seq
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MFGPRTHSHREKVIPGIITAEKTNLRDSFFSVILGLEDAMEFPRFTFNPKEGIDNPALII
SDDPEPDPSPVPRQCQIKCKEGQSFGFRLRMERSCRGYVVHQVDPWSPAALSGLRDGDRV
LEVNEEFVDNMEFPRVVQRIQACGLQLFLLVLKGEEYKEALAQGLDIQALTRAYRGETCS
RPRLCHITRDPVLGLGISIIPIEGQKGQYMLSTVSEGPAKKAGVRSGDRLVWINGAMVST
LTHSAISKMVKKCSVHVTVLVIDRESEASYVRRKLPILPIMAGSHNLPHRPTTMHLVQGS
DGYGFLLRQERLTSGGPIAHLLREVDVGSPAEEAGMQDGDLLLAVNGQPSESMEHEDIVR
TVRKSGNRVSLTTMPIHGRDFYTQLGLSPLLFHEDSLPEGEGMRKTQSPCTEIQDGLSKN
EHGSLPCPRLCVLEREESGFGFNLGCVQHEPGTFIGQVVVKGSGHRAGLWEGDVVVEVNG
QNVENEYFEDVVMLIKKSEPSLKLLVVERSGYERLKHNGLPITPGVILHSTQVLEKTNDA
FL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaccaaggacacacagccacagggagaaggtcattcctggaatcattactgca
gagaaaacaaacttgagggattcttttttttctgtcattctaggtcttgaggatgcaatg
gaatttccaagattcaccttcaatccgaaagaggggatcgacaatccagccttgatcatc
tcagacgacccggagccagaccccagtccggtaccccgccagtgccagataaagtgcaaa
gagggccagagttttggcttccgtctgcgaatggagaggagctgccggggctatgttgtc
caccaggtggatccgtggagtcctgcagcgctcagtgggctcagggacggggaccgtgtg
ctggaggtcaatgaggaatttgtcgacaacatggagttcccgagggtggtgcagagaatc
caggcatgtgggctgcagctgttcctgctggttctgaagggggaggagtataaggaggcg
ctggcccagggactggacatccaggctctgaccagggcttaccgaggggagacatgttcc
cggcccaggctgtgtcacatcaccagagaccctgtcttaggtctgggaatcagcatcatc
cccattgaaggtcagaagggtcaatacatgttgagcacagtaagtgagggtcctgcaaag
aaggcaggggtgcgtagcggagatagactggtgtggatcaacggtgccatggtatcaacg
ctcacccattcagctatcagtaaaatggtgaagaaatgtagcgtccatgtgaccgtcctc
gtcatcgacagagaaagtgaagcaagctacgtccgacggaaactgcccatcttgccgatc
atggccggctctcacaacctgccacacagacccacaacgatgcatctggtccaggggtca
gatggatacggcttcttattacgacaagagaggttgacatcaggggggcctattgctcac
ctactccgtgaggtggatgtggggagtccggcagaagaggctggcatgcaggatggagac
ttgctgctggcagtcaatgggcagccttcggagtccatggagcatgaggatattgtcagg
acagtgaggaagagtggcaaccgggttagcctcaccaccatgcccatacacggaagagac
ttctacacgcagttgggtctatctcccctgctattccatgaggacagtctgccagaaggg
gaggggatgaggaagacacagtccccttgcactgagattcaggatgggctgagtaaaaat
gagcatggctcacttccatgtccaagactctgtgtcctcgagagagaagaatcaggcttt
gggtttaatctgggctgtgttcaacatgagccaggaacgttcataggccaggtggtggta
aagggctcaggacatagggctggtctgtgggaaggggatgtcgttgtggaggtaaatggc
cagaatgtagagaatgagtactttgaggacgtcgtgatgctgataaagaagagcgagccg
tctttgaaattactggttgtggagaggtcagggtatgagagactcaaacataatgggctt
ccaatcactcctggggtcatactccacagcactcaggttttagagaaaacgaatgatgct
ttcttgtga
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