Oncorhynchus tshawytscha (Chinook salmon): 112244792
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Entry
112244792 CDS
T05605
Name
(RefSeq) laminin subunit beta-3-like
KO
K06244
laminin, beta 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04382
Cornified envelope formation
otw04510
Focal adhesion
otw04512
ECM-receptor interaction
otw04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112244792
04518 Integrin signaling
112244792
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112244792
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112244792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
LAMB1
GldM_1st
KASH_CCD
ATG17_like
hEGF
GEMI5_RBS
DUF1664
CCDC171
DUF8567
F5_F8_type_C
CEP135_TSGA10_CC
GLE1
CCDC39
APG6_N
Motif
Other DBs
NCBI-GeneID:
112244792
NCBI-ProteinID:
XP_024268359
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All DBs
Position
LG02:complement(45045856..45073896)
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AA seq
1152 aa
AA seq
DB search
MWILFHLAALTAVAATQRDCSRGACYPPMGDLLLGREHQLHASSTCGLAGSEVFCTYFGQ
WRMKCCTCDSGNPSSQLAHTIQNVLSTAGPNRWWQARKDVSPVTLQLDLQNLFQLDTIIL
TFKGPRPSALVVERTLDNGQTWQPSLYMASDCRSAFPGIAMTMPHSLDQTYCYTLPPVPA
YSYQDQTIQFSPLRQFSSISVPNGQKIQEVSGLTGLRVKLTELGAVPRLPGRTPSLFYAL
REMRVMGTCLCHGHANRCLQDTTANQMPSTQVSAQCECQHNTAGVNCEQCADLYNDLPWR
SAEEGNTHTCKRCECNNHAQRCRFDPSVYEASGWRSGGVCEGCLHHTTGPKCDRCAPGYQ
PNHRSSIDQPDACIRCHCSAEGAENGGRCDDVTGSCRCKMGYYGLTASNPLGCTKCFCSA
EGSLSSVCDPVSGQCPCQPYHQGLTCELCSRGYWKPSSLHGCEPCHCDPTNSHGDTCDRS
TGQCQCRSGFGGRTCTECPDNTYGDPLIGCRLCQCAAGGMVPGGCDKRTGACRCRIGVIG
THCDACSRGHVYSFPDCEVCPSCFFSLDSYIQNLTLGLERLSARIPSRPGGSLPTGLGLR
IQALEATLIQIRDSLPLPTPSMRQVNDTLFQLRRLRDQLDQVDGDLSPQGRGLELGSQLD
ELQALLGGLGLLYNSKRDALRNPINSNNAGAFSSIKNAYDESTDAAKSVDASGKTVDQSS
AVREDALDLQNQVQPENTRDLEKLNQQLNTKPDLSPTAKQVCGSVRSAPCTPAQCDGELC
PAEGAPPCGRGESCVGALPLGTRAVRDAEEVKDRLQQLNGKITQAVAQIQKTQDTVNLVR
QSTDDLVNQMRRARDDLEADLQETRYFVKELKDFLSDPSSDPTDISTVSEWILNAKLPLS
LAALKRKLQEIRALAAGLPDSKAVLDQAGPQLDTARRLLQEAQDARDAGLGVKDDVDGLL
KGFTAVEGSLSGLNDKVQDSLDIVEDISNSLAQTKAQLTPSVKALGEVSALAEGMKPQLE
GLKALVRSGGLLAQNAEGEANKANKEADAVTRDLASLEKQLEQLRAAERTSGHGDGTGTT
GERLRKLQEEAGSLAQDTGDMMKALAGKADSLRRLQDEVLLKSQRLTGLDGKLRDLLADM
RQKVKILSTCQG
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtggattttattccacttagcagccctgacagcagtggctgcgacccagagggactgt
tcccggggggcctgttacccccctatgggagacctgctcctcggtagggaacatcagctt
catgcctcctccacctgcggccttgccggctctgaggtgttttgcacctactttggacag
tggaggatgaagtgctgtacctgtgactccgggaacccatccagtcagttggctcacacc
atccagaacgttctatccaccgctggacccaacaggtggtggcaggccaggaaagacgtg
agtccggtcaccctacagttggacctacagaacctgtttcagctggacaccatcattctg
accttcaagggtccccgccctagtgcgctggtggtggagaggacgttggataatggtcaa
acctggcaaccgtcactctacatggcctcagactgtcgctcggccttccctggcattgcc
atgacaatgccacactctctggaccagacctactgctacaccctacctcccgtccccgct
tactcttaccaggaccagactattcagttcagccccttgcgccagttctctagcatcagc
gtccccaatgggcagaagattcaagaggtgtcaggattgacaggcctgcgggtgaagttg
actgagctgggtgctgtgccccgcttgcccggccgcaccccctctctgttttatgccctc
agagagatgagagtgatgggcacctgcctctgccacggccatgccaaccgctgtctgcag
gatactactgccaaccagatgcctagcacacaggttagtgctcagtgtgagtgtcagcac
aacacagcaggtgtaaactgtgagcaatgtgctgatctctacaacgacctgccctggaga
tctgcagaggagggaaacacacacacctgcaaacgttgtgagtgtaacaaccatgcccag
cggtgccgtttcgacccatctgtgtatgaggcgagtgggtggaggagtgggggagtgtgt
gagggctgtctgcaccacacaaccgggcctaaatgtgaccgctgtgcccctggataccaa
cccaaccaccggagcagcatagaccagcctgatgcctgcatacgctgccattgcagtgca
gagggggcggagaatgggggtcggtgtgatgatgtcacagggtcttgtcgctgcaagatg
ggatactatggcctgactgcctccaaccctctgggctgcacgaagtgcttctgcagtgca
gagggctccctgtccagtgtgtgtgaccctgtgagcggtcagtgtccctgtcaaccttac
caccaggggctgacttgtgaactctgttcccgtggttactggaaaccctcctccctccac
ggctgtgagccctgtcactgtgaccccaccaactcccatggtgacacctgcgaccggagt
acgggtcagtgtcagtgcaggtcagggttcggaggtcgtacctgtacagaatgtcctgac
aacacttatggagaccccctcattggctgcagactgtgtcagtgtgctgctggaggcatg
gtaccaggaggctgtgataagcgtacaggggcctgccggtgccgtattggtgtcataggt
actcattgcgatgcctgtagccgtggccatgtttactcctttcccgactgtgaagtctgc
ccctcctgcttcttctctctggactcctacatccagaacctcaccctgggcctagagaga
ctctccgccagaatcccctctcgtcctggtggctcgttgcccaccggtctgggtctccgc
atccaggccttggaggccactctcatccagatacgtgactctctcccactcccaactccc
tctatgagacaagtcaacgacaccctctttcagctacgcagactaagggaccagttagat
caggtggatggggatctgtcaccccaaggccgaggcctcgagctgggctcacagctggac
gagttgcaggctctcctgggcggtctgggtctgctgtacaactccaagagagatgctcta
aggaaccctatcaactccaacaatgcaggggccttctcttctataaagaatgcctatgac
gagtccacggatgcggcgaagagtgtggatgctagtgggaagactgtagatcaatcttca
gcggtcagagaggacgctcttgacctccagaaccaggttcaaccagaaaacaccagagac
ctggagaaactcaaccagcagctgaacaccaaacctgacctctcacccactgctaagcag
gtgtgtggcagtgtgcgctctgccccttgtacccctgcccagtgtgatggtgagctgtgc
cctgcggagggggcgccaccctgtggtcgtggcgagagttgcgttggggctctgcctctg
gggacccgagctgtgagggatgctgaggaggtaaaggacagactgcagcagctcaatggg
aagatcacacaggctgttgcacagatccagaaaacacaggacacggtcaatctggtcaga
cagtccacggacgatctggtcaatcagatgaggcgggccagggatgacttggaggcagat
ctgcaggagacaagatactttgttaaagagctgaaggacttcctgtcagacccgtcgtca
gacccgacagacatcagcacggtgagtgagtggatcttgaacgccaagctgcctctcagt
ctggcagctctgaagaggaagcttcaggagatcagagctctggcggcaggactcccagac
agcaaagcagtcctggaccaggctggaccacagctcgacaccgcccggcgcctgctacag
gaggcccaggacgccagggacgctgggctgggtgtgaaggatgatgttgacgggctgctg
aagggcttcaccgccgtggagggctccctctctggcctgaacgacaaagtgcaggacagc
ctggacatagtggaagacatcagcaacagtctggcacagaccaaggcccagttgactccc
tcggtgaaggctctaggggaggtgtctgccctggctgagggaatgaaacctcagctggag
gggctcaaggcgctggtgcgctctggaggtctgctggcccagaatgctgagggagaggcc
aataaggctaacaaggaggcagatgctgtgaccagggacctggcgtccctggagaagcag
ctggagcagctgcgtgctgcagagaggaccagtggtcatggcgatgggacggggacgaca
ggtgaacgtctccggaagctgcaggaggaggctggttctctggcccaggacactggagac
atgatgaaggcactagcaggtaaagcagactctctgcgtagactacaggatgaggtccta
ctgaagtcccagaggctgaccggtctggacggcaaactgcgggacctcctggctgacatg
agacagaaggtcaagatcctctccacctgccagggctga
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