Oncorhynchus tshawytscha (Chinook salmon): 112244800
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Entry
112244800 CDS
T05605
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112244800
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112244800
04261 Adrenergic signaling in cardiomyocytes
112244800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112244800
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112244800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
112244800
NCBI-ProteinID:
XP_042155426
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Position
LG02:complement(45654708..45713252)
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AA seq
1092 aa
AA seq
DB search
MLWNWRILFPHVCCASFLLFWIMLGTVVEVMGSQPGIPLSVVKLWASAFGGEIKSISAKY
SGSQLLQKKYKEFEKSVRVEEIDGMKVVKTLAKKMEEMFRMKKEAMRRLVEAAEEAHLQH
EEDPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVPTNMYN
KDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFD
CRNRKWYIQAATSPKDMVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQE
MHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILSDFNQTGHGSV
CSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQ
ISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSTLSQAHKSRNKKGPSLMTTVA
MPVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTHPDLR
PLYQEGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKM
HNDYFYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLLDLEQPDVALADEWTYCNTDE
HHEHRSLSQIQAIKLYLTGRKPHIKCDRELVQEVLFDAVVTAPLEAYWTGLALNKSENSD
KGVEIAYLGTRTGLSRTSLFVVPEHLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGT
FVYSIPFGGMETLTQNNKSVVLASTAIQLLDDRKSPIVASVGIQMKLDFFQRKFWTASRQ
CAALDGKCTISCDNEDIKCYLIDNNGFILVTEDYSQTGLFFGEVESAVMNKLLLMGSFKR
ITLYDYQALCRVYAGSSDSARSLSHPFSIVKWLLTKLVIFLLEFNLYSWWHVDLSVKAQR
SRGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGCARSFVIQQIPSSNLFMVVVDNKCDC
SSAPLVSMDPIEIMYNESLKCDRLKFQKDRKRPETCHPFHPEENAMECGGTAGLSAPLTA
ALLPLLATFISR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaattggaggatcctctttccacacgtgtgctgcgccagcttccttctgttc
tggattatgctgggcacggtggtggaggtgatggggtcccagccagggattcctctctca
gtggtgaagttatgggcctcagcgtttggtggagaaattaaatcaatttctgcaaaatac
tctggttcccagctgctgcagaagaaatataaagaatttgagaagtccgtccgagtggaa
gaaattgatggcatgaaagtggtcaaaactctcgcaaagaagatggaggaaatgttccgg
atgaaaaaggaggccatgcggcggctggtggaggcagcagaggaggcccatctacagcac
gaggaggacccagagctgcagtatgagtactttaacgcggtgctgatcaacgaggtggat
gaggagggcaacaacgtggagctgggaggagagttcgttctggaacccaatgaccacttc
aacaacctgtcagtcaacctcagcctcagtgtggtgcaggttcccaccaacatgtacaac
aaagatccagccatagtgaatggggtgtactggtcagaggccttgaataaagtgtttgtg
gataactttgaaaaagatccgtccctgatatggcagtactttggcagtgccaagggcttc
tttaggcagtatcccggggtcaaatggcatccagatgaacacggggtcatcgccttcgac
tgcaggaacaggaagtggtacatccaggcagcgacgtctcctaaagacatggtgatcctg
gtggacgttagtggcagtatgaagggcctgagactgaccattgccagacagacggtctcc
tctatactggacacactgggagacgacgacttcttcaacatcatcgcttacaatcaggag
atgcactatgtggagccttgtctgaacggtacactggtacgagcagacagaaataataaa
gctcatttccgagaacatctggacaagctgttcgccaaagggattggtctgctgggtgat
gctctgaccgaagcgttcaccattctaagtgattttaaccagactgggcatggcagtgtg
tgtagccaggctatcatgctggtgactgacggggcaacgcagatgtacgacgatgtcttc
gccaagttcaattggccagacagaaaggtgcgcatattcccttacctgattggccgagag
tctgcctttgctgataacatgaaatggatggcctgtgctaataaagggtatttcagtcag
atctccacactggctgacgtacaggaaaatgtgatgaggtatcttcatgttatgagtcgt
cctaaagtcatcgaccatgagcatgacacggtctggacggaggcctacgtggacagcact
ctctcccaggcacacaagtccagaaacaagaagggcccaagcctgatgaccactgtggcc
atgcctgtgttcagcaccaagaacgagaccaagaaccagggtatactcctaggggtagtg
ggcacagacattcctcttcaggaactcatgaagatcatccctaaacacctgctgggtatc
cacggttacgcctttgccatcacaaacaacggctacatcctgacccatccggacctgagg
ccactgtaccaggagggccagaagaggaggaaacccaactacagcagtgtggacctgtca
gaagtggagtgggaggacaaggatgactttctgcgtaatgccatggtcaacaggaagact
gggacattctccatggaggtgaagaagacagtggacaaagggaaaagactcctgaagatg
cacaatgactatttctacactgaagtcaagggaactcccttcagtgtcggagtggctttg
tctagaggccatggcaaattcttcttcagaggaaacgtctcagtggaagcagggctcctt
gacctggaacagccagatgttgcgctggcagatgaatggacgtattgcaacacagatgag
caccatgagcaccgctccctctcccagatccaggccattaaactctacctgaccggacgc
aagccacacatcaaatgtgacagggagctggtccaggaggtgttgtttgatgctgtggtc
acagccccactggaggcctactggaccggcctggccctcaacaagtccgagaactcagac
aaaggagtggagattgcttacctaggcacacgcactggcctctctagaaccagcctgttt
gttgtcccagagcacctatccaatcaagacttcctgacggcagaggataaggagggggtg
ttcaacgctgaccacttccctctgtggtacaagagggcagcagagcaggttcccggcacc
tttgtctactccatcccctttggaggtatggagacacttacacaaaacaataagagtgtg
gttttggccagcactgccatacaactgctggatgacaggaagtcgcctattgttgcctct
gttgggattcagatgaagctggatttctttcagaggaagttctggaccgctagtagacag
tgtgctgctctggatgggaagtgcaccattagctgtgataatgaggacatcaaatgttac
cttattgacaacaacggatttattctggtcacagaggactactctcagacggggctgttc
tttggagaggtggaaagtgctgttatgaacaagctgcttctcatgggttccttcaaaagg
atcactctgtatgactaccaggctctctgtagagtgtatgctggcagcagtgacagcgca
cgctctctatcacatcccttctccatcgtgaaatggctcctgaccaaacttgtcattttc
ctgctggagttcaacctttacagctggtggcatgttgatctctcagtcaaagcccaaagg
tcgaggggaaagaccatgatggtgccatgtgacacggagtaccctgcattcgtctctgag
cgtaccatcaaagagaccacgggaaacatcgactgtgaggggtgtgccagatcttttgta
attcagcagattcccagcagtaatctcttcatggtcgtcgtggacaacaagtgtgactgc
agctctgcccccctggtttccatggatcccatcgagattatgtacaatgagtctctgaaa
tgtgataggctgaagtttcagaaagacagaaagcggccagaaacgtgtcatccttttcac
cccgaggagaatgccatggagtgtggaggaacagcaggcctctctgccccccttacagca
gcactgctccccctactggccactttcattagcaggtga
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