Oncorhynchus tshawytscha (Chinook salmon): 112244818
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Entry
112244818 CDS
T05605
Symbol
fbxo42
Name
(RefSeq) F-box only protein 42
KO
K10317
F-box protein 42
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112244818 (fbxo42)
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112244818 (fbxo42)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_5
Kelch_1
Kelch_6
Kelch_2
F-box-like
NANM
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
112244818
NCBI-ProteinID:
XP_024268383
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All DBs
Position
LG02:45201765..45216162
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AA seq
703 aa
AA seq
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MSRSSDSEDGYFVAMDTEEDGAGPVGLAQEEEEKMGTNRRERDLEGLVEGERTMVELPEE
VLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCYHGFLRAVQDGYIQWESRTYPYPG
TPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPSP
KAGATLVMYKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPMA
GHSSSVIGSTMVVFGGSLGARQMSNEVWVLDLEQWSWSKPTISGPSPHPRGGQSQIVVGN
ETLLILGGCGGPNALLKDAWLLHMGAPPWTWQQLRVENDDHGAPELWCHPACRVGQCVVV
FSQAPSGRAPLSPSLNSRPSPISASPAPLGTEPPSLRSYSPVRSGAAGVVLGAAEEAPCV
NGRWGTLRPRPSARGGAREGSPGSSSQQPSPSQGPDSPPLPSLHPLLDGSSPSPRTSPAQ
AASPPSHPPVSSDYGWESTLSATHPLSAEVLSTNGVHTPPPAPGSPLTPPGAVSPAALRR
GLEAVKNPSSSSMPSSSNPLSQGAATGVSGSGGGGASAGTSPSSSSPPQVAADGHTIPPI
ARRLGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKGDGLVSWRVYGNGTPAAVTGPP
ETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctcctcagacagtgaggatggatactttgttgccatggatacagaggaagat
ggagcagggcctgttggattggcacaggaggaagaagagaagatggggaccaacagaaga
gagagggacctagagggcttagttgagggcgagaggacaatggtggagctaccagaggaa
gtcctagaatacatcctgtccttcctttcaccttaccaggagcacaagaccgctgcactg
gtgtgtaaacagtggtaccgcctcatcaaaggtgttgcatatcagtgttaccatggtttt
ctgcgggccgtccaggatggctacatccaatgggagagtcgtacatacccatatcctgga
acacccatcactcaacgcttctcacacagtgcatgctactatgactccaaccagtccatg
tatgtgtttgggggctgcactcagagtagctgcaatgctgccttcaatgacctgtggaga
cttgacctcaacagtaaggagtggatccgccctttagcctcaggctcctatccgtctcct
aaagcgggggctaccctggtgatgtacaaagacctgctggtgctgtttggtggatggact
cgccccagcccctacccactgcatcagccagagagattctttgacgagatccacacatac
tccccttccaaaaactggtggaactgcatcgtgacgacccacggtcccccgcccatggcc
ggtcactcttcctctgtcatagggagcaccatggtggtgtttggagggtcactaggggca
cgccaaatgagtaacgaggtgtgggttctggatctggagcagtggtcctggtccaagcca
accatctctggcccgtccccccacccacgaggaggccagtctcagattgtggttggcaac
gagactctacttattctgggaggctgtggaggccctaatgcgctgctgaaggatgcctgg
ctcctccacatgggtgccccaccctggacgtggcagcagttgagggttgagaacgatgac
catggagccccagagctgtggtgccaccccgcctgcagggttgggcagtgtgtggtggtg
ttctcccaggctccgtctggccgtgcgcccctcagccccagcctgaactctcggccctca
cccatcagtgcctctcccgctcccttgggcacggagcccccttccctgcgctcctattcc
cctgtgaggagcggagccgccggggtcgtactgggggccgctgaggaagccccctgtgtg
aacggccgctggggcacactgagaccccgtccctcggccagagggggtgccagagagggt
agccccggctcctcctctcagcagccatccccctcccagggtcctgacagcccgcctctt
ccatccctccatccactactcgacggctcgtccccctctcccaggaccagccctgcccag
gctgcctccccgccctctcacccccctgtctcgtcagactacggctgggaatctaccctt
tctgccacccaccccctttctgctgaggtactcagcactaatggagtgcacacacctccc
cctgctcctggctccccactcactccaccgggggcggtgtcccctgctgccctgagacgg
ggcctggaggctgtcaaaaacccgtcctcttcatccatgccatcgtcctcaaatccattg
tctcaaggggctgctacaggagtaagtggaagcgggggaggcggggcttcagcgggaacc
tccccatcatcctccagcccaccacaggttgccgctgacggacacaccatcccgcccatc
gcacggcggcttggccatcacccgccccagagcctaaacgtgggcaagcccctgtaccag
tcgctcaactgcaagcccatgcagatgtatgtactggatgtgtcccgagccaaaggggac
ggccttgtctcctggagggtttacggtaacggaacccccgccgccgtcacgggtcccccc
gagacgagcctccacacagtggtccaagggagaggtgagctcatcattttcgggggcttg
atggacaagaagcagaatgtgaagtactaccctaaaaccaacgccttgtactttgtacgc
gctaagaggtaa
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