Oncorhynchus tshawytscha (Chinook salmon): 112244825
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Entry
112244825 CDS
T05605
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112244825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
otw00535
]
112244825
Proteoglycans [BR:
otw00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
112244825
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_LRWD1
LRR_9
LRR_14
LRR_5
AMPKBI
Motif
Other DBs
NCBI-GeneID:
112244825
NCBI-ProteinID:
XP_024268394
UniProt:
A0A8C8J2C0
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Position
LG02:43146874..43150879
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AA seq
351 aa
AA seq
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MRGLCVFLLACVLPLSLASPGRQDPFLWLSALRGRGYVEGSLLADTTGGECPAECDCPPS
FPIAMYCDGRGLTAMPNVPSRMKYLYLQHNEISAIPDSALANATNLVWVMMHHNALSTDK
IGKRVFAKLQGLERLYLQHNNLTRVPPNLPSSLRDLRLNNNNINKITPAALDGMENLTIL
YLHDNALTDMGTSLRGLNSLTLLDVSGNKLKKVPDSLPERLHQLYLESNAISALPEGFLS
KFSQLQYVRMAHNQLTDNGIPPNTFNVSGLVELDLSFNQLERIPPVSQTLEHLYLQANHI
KEFTLGSFCDVVDVMNFSKLRTLRLEGNEISIGDVPSESALCLRLANTIDV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaggggattgtgtgtgttcctcttggcgtgcgtcctgccgctatccctcgcctcgcca
ggcaggcaggacccgttcctctggctgtccgccctgcgaggtcgtggttatgtcgagggc
tccctattggctgacaccaccggaggggagtgtcctgcagagtgtgactgcccaccctcc
ttccccatcgctatgtactgtgacgggcgtggcttgacagccatgcccaacgtgccttcc
aggatgaagtatctgtacctgcagcacaatgagatctccgccataccagactctgccctg
gccaacgccaccaaccttgtctgggtcatgatgcatcacaacgctctgtctacggacaaa
atcggcaagagggtgtttgccaagctgcaggggttggagcgtctgtaccttcaacataat
aacctgactcgtgttccccccaacctgccaagctcactacgggacctcagactcaacaac
aacaacatcaacaagataacaccagcggcccttgatggcatggaaaacctgaccatcctg
tatctccacgataacgctctgacagatatgggcacatctctgaggggtttgaactcactc
actctgcttgatgtcagcggcaacaagctgaagaaggtaccagatagtctcccagagcgc
ctccaccagctgtacctggagtccaacgccatcagtgctctcccagagggtttcctcagt
aagttctcccagctgcagtacgtccgcatggcccacaaccagctgaccgacaatggcatc
ccccccaacaccttcaacgtgtctggcctggtggagctggacctcagcttcaaccagctg
gagaggatcccccccgtcagccagacgcttgagcacctctacctgcaggccaaccacatc
aaagagtttaccctggggagtttctgtgatgtcgtggacgtaatgaacttctccaagcta
aggacactgcgtctggaggggaatgagatcagcatcggggatgtcccctcggagtcggcc
ctctgtctgcgtctggctaacaccattgatgtgtaa
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