Oncorhynchus tshawytscha (Chinook salmon): 112244870
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Entry
112244870 CDS
T05605
Symbol
bicd2
Name
(RefSeq) protein bicaudal D homolog 2 isoform X1
KO
K18739
protein bicaudal D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112244870 (bicd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112244870 (bicd2)
04131 Membrane trafficking [BR:
otw04131
]
112244870 (bicd2)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112244870 (bicd2)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112244870 (bicd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BicD
Golgin_A5
DUF1759
Lectin_N
Tup_N
DUF2920
Motif
Other DBs
NCBI-GeneID:
112244870
NCBI-ProteinID:
XP_024268480
LinkDB
All DBs
Position
LG02:45931130..45981981
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AA seq
852 aa
AA seq
DB search
MSVEEQEYPEATLVAEAGPQWFRAELERLSRELSDTTHEKIQAAEYGLAVLEEKQLLKQR
YDELETEFETVRQELDQLKEAFGQAYSTHRKVAADGESREESLMLESASKEAQYQQLQNE
LRLARTALTSTQSENERLAAVALEMRESSEQVELQRTQLRDDIREYKVREARLLQDYSEL
EDENISLQKQVSLLRQSQVEFEGLKHEIRRLEEDSQCLHSQQEEVMRLREIAERQLTEAL
ETIKTEREQKAALRKELSHYMTIGDNLLPYHHSSLNVSLDGLKFSEDPTAATNVPNNDDS
FRGYENGLAEMAADANEDNKAKLRPAPSLVDDLLSELNISEIQKLKQQLMQVEREKAALL
SSLQESQKQLEVAHGTLSEQQETVGRLTENLSAMRKLQASKERHSALDSEKERDSRDDGD
GDYYELDINGPEILQCKYTIAVSEAGELRQELKTLKAEYQSCRSQYEEERVRLESDVAGL
SEKLTSLEKSSREEHEEVARLVKELRRVSEAVGESQGSLNVAQDELVTFSEELANLYNHV
CMCNNETPSRVMLDYYKEGKASIGGRGSREGKTQHLSHVLLSNGLVPETEPIKSEASDPA
TPAPIPESRSEPMNIYNLVAIIRDQIRHLQQAVDRTTELSRQRMASMELGTVTDKDKEAC
MGEILKLKSLLSTKREQIATLRTVLKANKQTAEVALANLKSKYDNEKTMVTETMLKLRNE
LKGLKEDAATFTSLRAMFATRCDEYVTQLDDMQRQLAAAEDEKKTLNSLLRMAIQQKLAL
TQRLEDLEFDHEQARRGGGVAAGGRGKTSSLARGKGASANHYPVASWSAKTPLCTTNPYH
PNPTDSPTLPCH
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggaggaacaggaatatccagaggcgactctggttgcagaggccgggccgcag
tggtttcgggcggaattagaacgcctatcccgggagttgagcgacacgactcatgagaag
atccaggcggcggaatacgggcttgcggtgctcgaagagaagcaactgctcaaacagcgg
tatgatgagttggagactgagttcgagaccgttcggcaggaactcgaccagctgaaggag
gcgtttggtcaggcctactccacccataggaaggtagctgcagatggggagagcagagag
gagtcactgatgctggagtcagccagtaaggaggcccaatatcagcagctgcagaatgag
ctgcggttggccagaaccgccctcactagcacccaatcagagaacgagcgcctggctgcc
gtcgccctggaaatgagagagagctctgagcaggtggagttgcagcgcacccaactgcgt
gatgacatccgagagtataaagtacgggaggcacgtctgctgcaggactacagtgagctg
gaggatgagaacatctccttgcagaaacaggtgtccctgctacgacagagccaggtggag
tttgagggtctgaagcatgagatccgtcgcctggaggaagactcccagtgcctccacagc
cagcaggaggaggtcatgcgcctgagggagatcgccgagcgccagctgaccgaggctctg
gagaccattaagactgagcgtgagcagaaggccgccctgcgtaaagaactgtcccactac
atgaccattggggacaacctgttaccataccaccacagttccctcaacgtctccctggac
ggactcaagttcagcgaggatcccactgctgccaccaacgtgccgaacaacgatgactcg
ttccgcggctacgagaacggcctggccgagatggccgccgacgccaacgaagataacaaa
gccaaacttcggcccgcccccagcctagtggatgacctgctgagtgaactcaacatctca
gaaatccagaaactcaagcagcagctcatgcaggtggagcgagagaaggcggcgctcctc
tcctctctgcaggagtcccagaagcagctggaggtggcccacgggactctgtcagagcag
caggagacggtgggacgcctcaccgagaacctcagtgccatgaggaaactccaggccagc
aaggagcgccactctgccctggacagcgagaaagagcgagacagccgcgatgacggtgac
ggggactactacgagttggacatcaacgggcctgagatcctacagtgtaagtataccatc
gccgtatcagaagctggggagctcagacaggagctgaagactcttaaagccgagtaccag
tcttgccggagccagtacgaagaagagcgagtccgcctggagagcgacgtggcagggctg
agcgaaaagctgacctccctggagaagagcagccgggaggagcacgaggaggtggcaagg
ctggtgaaagagctgcggcgagtgagtgaagcggttggcgagtcgcagggaagcctgaac
gtggcgcaggacgaactggtgacgttcagcgaggagctggccaacctttataaccacgtg
tgcatgtgcaacaacgagacgcccagccgggtcatgctcgactactataaggaaggaaag
gccagtatagggggcaggggcagccgagaggggaagacacaacatctgtcccatgttctg
ctctccaatgggctggttcctgaaactgaacccattaaatctgaagccagtgatccagcc
accccagccccaatcccagagtcccgttcagagcccatgaacatctataacctagttgcc
atcatcagggaccagatccgtcacctgcagcaggcggtggaccgcaccacagagctgagc
cgccagaggatggcctccatggagctgggtactgtgaccgataaggacaaggaggcctgc
atgggggaaatcctcaaactcaagtctctgctcagcaccaagagagagcagattgccacc
ctgaggaccgtgctcaaggccaacaaacagacggctgaggtggcgctggccaacctgaag
agtaaatacgacaacgagaagaccatggtgaccgagaccatgttgaagctccgcaatgag
ctcaagggcctgaaagaggacgctgccaccttcacctcattacgggccatgtttgccaca
aggtgtgacgagtatgtgacccagctggatgacatgcagaggcagctggctgcagcggag
gatgagaagaagaccctgaactccctgctccgcatggccatccagcagaagctggccctg
acccaacgactggaggacctggagttcgaccatgaacaggcgcgccgcggcgggggagtg
gcggcaggcgggcggggaaaaacctcctcattggcgcggggcaaaggggcatcggccaat
cattatccagttgcatcatggtcagccaagactccactgtgcacgactaacccttaccat
cctaaccccactgactcccccaccttaccatgccactaa
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