Oncorhynchus tshawytscha (Chinook salmon): 112244887
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Entry
112244887 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112244887 isoform X1
KO
K05453
macrophage colony-stimulating factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112244887
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112244887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112244887
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
CSF and other factors
112244887
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Motif
Other DBs
NCBI-GeneID:
112244887
NCBI-ProteinID:
XP_042155271
UniProt:
A0A8C8HPE3
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Position
LG02:complement(43987283..44033322)
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AA seq
612 aa
AA seq
DB search
MSPTLEPGHFGLLVSFQDFLLAVTTDGLLIARHLCFLFLMCFPLAWGGVPGPCRHSVTKG
HLLNLNCLIDNQLENGWSITYGFTERQSLSEVCYIKAAFPQILELLNTHFKYVRKSDNGR
YVKLLKKVIYDLYSQNCIPEINEEIEDTPLKFVRMHSTSPREALTKARGVIEMYMTLMAK
SNGPVDWNCEEEYAEDYQESTTALPTPTTAEPEPERRCTCPTVGPVTPDVSLVSHSVWSS
PPQPTLSQLTSIVPPRPTHPSLGTKGAEPRVFLVSSGTVRPPFPRELQRTGPDGRSLGRR
REGDIHWDFHPPSPNGTESDSGLYQAVADTPSATNEPSPSTPPSLVLLGTVGSHDETFYY
PQTERIRETSTARPAGRGAAGSPHSHFAVAGAKLITPVPFLYKLIGITPSSDESTAYVLA
KRSLDARNYGILQDWVSTETPQLEDTREKYPGTERYLHDWNPPIESTTTEASPRLKMTVE
EPDKLHTTTEAHDQIMKTEPNHPRTSYKEVFSTDILSERTAADDAPISERSSEGSVKEFR
HGKTGHSDLSISYQTAFIIAAVCSGPILIITLFCLSEKKRLQALIHSTSIIENQRACSSI
EDIELQYCKAKD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctactctggaacctgggcattttgggttactggtatcattccaagattttttg
ttagcggtaacaactgatgggctgctaatagctaggcatctgtgcttcctcttcctcatg
tgcttccctttggcgtggggtggcgtccctggcccatgtcggcactctgtgaccaagggt
cacctcctcaacctcaactgcctgattgataatcagttggagaatggctggtcaataacc
tacggattcactgagcgccagagtttgagtgaagtctgttacatcaaagcagcatttcca
caaatcctggagcttctgaacacacacttcaagtatgtcaggaaatcggacaacgggcgt
tatgtcaaactcctgaaaaaggtcatatatgacctctactcccaaaactgcatacctgaa
attaatgaggagattgaggacaccccattgaagtttgtcagaatgcacagcacctcgccc
agagaggctctgacgaaagcccggggggtcattgagatgtacatgaccctgatggccaag
agcaacgggcccgtcgactggaactgtgaggaagagtatgcagaggattaccaagaatcc
accactgccctccccacccccaccacagctgaacctgaacctgaacgccggtgtacatgt
ccgacagtgggtccggtaacccctgatgtctccctggtgtcccacagcgtatggagcagt
cccccacagcccaccctctcccaactcacctcgattgtgcctcccaggccgactcatcca
tccctgggtaccaagggcgctgagccccgggtgttcctggtgagttctggtaccgtaaga
ccccccttccccagggagctgcagcggactggccccgatggacgttcacttggaaggcgc
agagagggggatatacactgggactttcatccaccttcacccaatggaactgagtcagat
tcgggactctaccaggcagttgctgacaccccgtctgccacgaatgaaccttccccgtct
acccctcctagtctggttctcctggggaccgttggctcccatgacgagacattttactac
ccccagactgagaggataagggagacttccacagcccgaccagcagggagaggagcagca
ggctcaccccacagtcacttcgctgttgctggggccaagctgatcacaccagtccctttc
ctttacaagttgattggcatcacccccagtagtgatgagagcactgcctatgtgttggcc
aagaggtcgctggatgccaggaattatggaatacttcaggattgggtttcaacagagacc
cctcaactagaggacactagagaaaaatacccaggcacagagagatatttacatgactgg
aaccctccgattgaaagcactacgaccgaagcatctccacgtttgaagatgacagtggag
gagccagacaaactacacaccactacagaggcacacgaccaaatcatgaagactgagcca
aaccatcctaggacatcctataaggaagtattcagcacagatatcctgtcagagaggaca
gctgcagacgatgctcctatttcagaaaggtccagtgaaggctcagtgaaggaattccgg
cacgggaaaactggtcattccgatctaagcatctcctaccagacagcctttatcattgca
gcagtgtgcagcggaccaatcctgatcattaccctattctgtctcagtgagaagaagaga
ctccaagcccttatccacagtaccagcataattgaaaaccagagggcatgcagcagcatt
gaggacattgagctacaatattgcaaagccaaggattga
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