Oncorhynchus tshawytscha (Chinook salmon): 112244920
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Entry
112244920 CDS
T05605
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112244920 (scfd1)
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
112244920 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112244920 (scfd1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF3882
Motif
Other DBs
NCBI-GeneID:
112244920
NCBI-ProteinID:
XP_024268575
LinkDB
All DBs
Position
LG11:complement(23256139..23273710)
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AA seq
634 aa
AA seq
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MAASVREKQAAALKRMLNFNTSPLKNTAAEPVWKVLIYDRFGQDIISPLLAVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALSANAVTQVTKVFDQYLNFITLEDDMFILCNQNKELISYHAINKPDIMDTEMEAIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDNMGAGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSMDESVGSEASPSGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAESVQEELDTYRAQEDEVKRLKSIMGLEGEDEG
PISSISMSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKL
MSKSTLEKSLLDIISDPDAGTPEDKMRLFLIFYITALQPPSETDLDQYKKALLETGCDLS
SLNYIKQWKAFTKIAATPSNYGNSGVKPMGLFSRVMNSGSQFVMEGVKHLVLKQHNLPVT
RILDNLMEMKSNPETDDYRYFDPKMLRGSESSTPRNKNPFQEAIVFVVGGGNYIEYQNLV
DYTKAKPGKRVLYGCSELFNAGQFIKQLSSLGQK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgtccgggaaaagcaggcagctgcattgaagcgcatgctgaatttcaac
acttctccattgaaaaacactgctgctgagccagtatggaaggttctgatctacgacagg
tttggccaggacataatctcccctctactggcggtcaaagaactacgggacatgggaatc
actttgcacttgttgcttcattcagacagagatcccatcccggatgtgccagccatctat
tttgttatgccgacagaggagaatattgaccggatatgccaagaccttcgtaaccagctg
tatgagtcatactatttgaacttcatctcagccatatccagaagtaaactagaggatatt
gctagtgcagctctctcagccaacgctgtcacccaggttaccaaggtgtttgatcagtat
ttgaatttcatcacactcgaagatgatatgtttatcctctgtaatcaaaataaagagctc
atctcctaccatgcgattaacaaaccggacatcatggacacagagatggaggccatcatg
gatacgattgtagacagccttttctgcttctttgtcactttgggtgctgtccccataatc
cgctgtccaagagggaatgctgcggagatggtcgcggtgaaacttgacaagaagctgagg
gagaacctgcgagacgccagaaacagcctgttcactggagacaatatgggggccggccag
ttcagcttccagagacccctatttgtactcgcggaccgcaacctggatcttgccacccct
ctccaccacacatggacctaccaggccctcatccacgatgtgctggacttccacctgaac
agggtcagtatggacgaatctgtggggtcagaagcttccccttccggagccagacccaag
aagaaaaataagaagagttatgacctcacagccgcagacaaattctggcagaaacacaag
ggcagcccgttcccggaggtggctgagtctgtacaggaggagttagacacgtaccgagcc
caagaggacgaggtgaaacgcctcaagagcatcatggggttggagggtgaggatgaggga
cccattagtagtattagtatgtcagacaacaccgcaaaacttacctcagctgtcagctcc
ctaccagagcttctggagaagaagaggctgattgacctccacactaacgtagccaccgcc
gttctggatcacattaagagccgtaaactggacgtgtactttgagtacgaggagaagctg
atgagcaaatccaccctggagaagtctttgctggacataatcagtgaccctgacgcggga
acaccagaggacaagatgagactgtttctgattttctacatcacagccctgcaaccccct
tcagagactgatctggaccaatacaagaaggctcttctagagactggctgcgacctgtcc
tctctcaactacatcaagcagtggaaggctttcacaaagattgctgccacaccatctaac
tatgggaacagcggtgtgaaacctatgggcctcttctctagagtgatgaactctggctcc
cagtttgtcatggagggggtgaaacacctggtgcttaaacagcataacctgccagtcacg
cgtatcctggacaacctgatggagatgaagtccaatccggagactgatgactacagatac
tttgatcccaagatgctgcgcggcagtgagagctcaaccccaaggaacaagaacccgttt
caagaggctatcgtctttgtggtcggaggaggaaactacatagaatatcaaaacctggtg
gactacacaaaggcaaagccagggaagagggtgctgtacggatgcagtgagctcttcaat
gcagggcagttcatcaaacagctatcctcactcggccaaaagtaa
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