Oncorhynchus tshawytscha (Chinook salmon): 112244951
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Entry
112244951 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 5
KO
K13709
Rho GTPase-activating protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112244951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112244951
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112244951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
FF
GTP_EFTU
NOG1
Roc
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
112244951
NCBI-ProteinID:
XP_024268620
LinkDB
All DBs
Position
LG11:complement(23031820..23069961)
Genome browser
AA seq
1502 aa
AA seq
DB search
MAKNKEARPLTYAVSVVGLSGTEKEKGNCGVGKSCLCNRYVRSNADSYYTEHTSVLSTID
FGGRVVNNDHFLYWGEVPHRSDDGLECKIQIIEQTEFIDDQTFLPHRSTNLQPYTKRAAA
SKIQSAEKLMYICTDQLGLEQDFDQKQMADGKLNVDGFILCIDVSKGCNRKFEDQMKFVN
SLYSQMVKSKKPIVIAATKCDECVEQYLRDLQAFAASKKNLLVVETSARSSINVDLCFNA
LTQQMDKTRGKPKTIPYLEAYKVQRQLVATVSDKFEKRIVQTVRDYHTSWKMVSNTLKNH
PDYEEYINLEGTRKARNTLNKHIEQLKQEHIRKRREEYFLSLPKILNNLLNNLEELENLS
WSEAQSILKSRAEFQFWFVVLEHTPWDETDQIDKVNDRRVPFDLLKTSEGEKIYQNHVQH
LFSEKRRLEMKDRFKKTLDRVHFISPGQPWEEVMCFVMEDEAYKYISESDRRDVYSQHQQ
EIVERAKEEFQEMLFEHAELFYDLDLNATPSCDKMSEIHTVLNEEPRYRALQKLAPDRES
LLLKHIGFVYHPTKETCLSGQSCVDMNVEQVLANRLVQLDHSRSNLYYNSANIEKVNLCL
LGREGLAQELANEIRAQSTDDEYTLDGKIYELELLPVDVNSTLLFSHTWASTFKPHGIFC
VFSSIESLNCIGDCIGRIRAEIAQNRRERYAQPLPFILILANQRDSVCKNMPILRHQGQQ
LANKLQCTFVDIPSDTFPRKFNELQIKQALRAVLEGLKHNFDVTSPLPSIKDMSETDLRI
VMCAVCGDPFSVDLILSPFLDSHSCSAGQPGQSNTLILNKIIGDSRRRIQVTVLSYHSSI
GIRKDELVHGYILVYSAKRKSSMAMLRAFLAEVQDVIPVQMVAITDSQADFFENDEIKEL
MTEGEHIATEITAKFTALYSLSQYHRQTEVFTPFFNEVLEKKSSIESAFMYDSSRDCMGA
SEDVFPQSPHSHSPAYNYYPDSEDDTEAPPPYSPIGDDVQLLPTPSERAKYRIDLEGNEY
PVHSTPLSDHERNHRVPPPVRPKPILPKSNVKKLDPNLLKTIEAGMRSNRRQRGPMAHGE
DVETSDNYADPIDTLLKSKGFSDDIYAVPEDTQSRIVKMRNSFGGLHVLHGDEENGFDRK
AQASRRPSKYKHRSKILFSKTKMYHRRVHSDVSDDESGPAMQKKKKGRAHRGSEEDPLLS
PADPWKGGIDNPAITSDPEQDDMKKKKKKTPKTKEPKKPKSKPPKPLYPPTRRNWDSNYF
GVPLQNLVTPDRPIPLFIEKCVDYIERTGLNTEGLYRVSGNKTDQDNIQKQFDQDHSVDL
IVMDVAVNAVAGALKAFFADLPDPLIPYILHPELVEAAKIVDHIERLQVLKEIVRKFPAV
NYEVFKYVITHLNRVSQQSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQSVIES
FIQQSHYFFYGGDIQESSSTESTPPPHHCHSMVEALLPLQLPPPLQPQQIQHSMSLQPDP
LI
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaacaaggaggcacgccccctaacatatgctgtcagtgttgttggcctctca
gggacagagaaggagaagggcaactgtggtgtgggcaagtcctgcctatgcaacagatat
gtgcgctccaacgcggacagctactacactgagcacacttctgtgttgagcacaattgac
tttggaggtcgcgtggtgaacaatgatcacttcctctactggggtgaagtgccacaccga
agtgatgacgggctcgagtgcaaaattcaaatcattgaacaaacagagttcattgatgat
cagactttcttgccccatcgcagcacaaacctgcagccctatactaaaagggctgcagcc
tccaagatacagtctgctgaaaagctgatgtacatttgcaccgaccagcttggcttggag
caggattttgatcagaagcagatggccgatgggaaactgaatgttgacggttttatattg
tgtatagacgtgagcaaaggctgcaataggaaatttgaggatcagatgaaatttgtcaac
agcctttattctcaaatggtcaaatcgaaaaagcctatcgtcattgctgcaacaaaatgt
gacgagtgcgtggagcagtatctaagggaccttcaggcattcgctgcaagcaaaaagaac
ctcctggtggtagaaacgtcagctcgatctagcatcaatgtagacctgtgttttaatgcg
ttaacccagcagatggacaaaacacgaggcaaacccaaaaccattccttatttggaggcc
tacaaagttcagagacagttagtagccacagtgtccgacaagtttgaaaagcggattgta
caaaccgtcagagattatcacacaagttggaaaatggtgagtaacacgttgaaaaaccac
cctgactatgaggaatacatcaacctggaaggcacccgaaaagctagaaacaccctcaac
aagcacatagaacagctgaagcaggaacatatcaggaaaaggagggaagaatacttcttg
agcctgccaaaaattctcaataacttgctcaacaacttggaagaacttgagaaccttagc
tggtcagaggctcaaagcatcttgaagagcagggccgagtttcaattctggtttgtggtg
ctggagcacaccccgtgggatgagacggaccaaattgacaaagtcaatgacagaagagtg
ccctttgatctcctcaaaacgtcggaaggggaaaagatttatcagaaccatgtccaacat
ctgttctcagagaaaagacggttagaaatgaaggatagattcaagaagacgttggataga
gtccatttcatcagccctggacaaccctgggaagaggtcatgtgttttgtcatggaggac
gaggcctacaagtatatcagtgaatctgatcgcagggatgtttacagccagcatcagcag
gaaatagttgaaagggccaaagaggaatttcaggaaatgctttttgaacacgccgagctg
ttttatgaccttgatttaaacgccaccccaagctgtgacaaaatgagcgagatccacact
gtgctcaacgaagagcccagatacagagccctgcagaaactggccccggacagggagtca
cttctcctcaagcacatcgggttcgtctaccaccccacaaaggagacgtgtctgagcgga
cagagctgcgttgacatgaatgtcgagcaggtactggctaacaggctagttcagctggac
cacagtcgctctaatctctactataacagtgccaacattgaaaaagtcaatctgtgtctc
ttgggaagagagggtctcgcacaagaactcgcaaatgaaatccgagcccagtccacagat
gacgagtacaccctggatgggaaaatctatgaactggagcttctgcctgttgatgtcaat
tcaacgttgctctttagccatacatgggcgtcgaccttcaaacctcacggaatcttctgt
gtcttcagctccatagagtcgctaaattgtattggcgactgcatagggcgaatcagggca
gagattgcacagaacaggagggagagatacgctcagccattgccattcattctaatccta
gcaaaccagagagacagtgtttgcaaaaatatgcctatcttgaggcatcagggccaacag
cttgcaaataagctacagtgcacctttgtagacataccctctgatactttcccgcggaag
tttaatgagttacaaattaaacaggctctcagagcagtattagaaggactaaagcacaac
tttgatgtgacgagccctctgccttccatcaaagacatgtcagagaccgacttgaggatc
gttatgtgtgccgtgtgtggggatccattcagtgtggaccttatcctttcacctttcctg
gattcacattcctgcagcgcagggcaacctggccaaagtaacactctgatcctcaacaaa
atcattggcgacagtcgcagaagaatacaggtcacagtcctctcctaccactcctccatc
ggaatcaggaaggacgagcttgtccacggatacatcctggtctactcggcaaaacgcaag
tcctccatggcgatgctcagagctttcctggcggaggtccaagacgtcatccctgttcaa
atggtggccatcacagacagtcaagccgacttctttgagaacgacgaaatcaaagagctc
atgactgaaggggagcacatcgctacggagataaccgccaaattcacagctctatactct
ctatctcagtaccatcggcagacggaagtcttcacaccgttcttcaacgaggtgctagag
aagaagagcagtatcgagagcgccttcatgtacgatagctctcgagactgcatgggtgcg
agcgaagatgtcttcccccagtctccccacagtcattcccctgcttacaattactaccct
gactcagaggatgacaccgaggctcctccaccttacagccccatcggggatgacgtgcag
cttcttccaacgcctagcgaacgtgctaagtacaggattgatctggagggaaacgagtac
cctgtccatagcacacctctcagtgaccacgagcgcaaccacagagtgcctcccccggtt
aggcccaagcctatactacccaagtccaacgtcaagaagctggaccccaatctcctgaag
accatcgaggctgggatgaggagcaacagacgacaacgcggccccatggcccacggtgaa
gacgttgagacgtccgacaattacgcagaccccatagacactctcctgaaatcaaaaggc
ttcagcgacgacatctacgctgtcccggaggatacccagagcaggattgtcaaaatgcgc
aattcgtttggggggcttcacgtcttgcacggggatgaggagaacggcttcgaccgcaag
gcacaagccagcaggaggccctcgaagtataagcaccgctcaaaaatactcttcagcaaa
accaagatgtaccacagacgtgtccactccgacgtcagcgacgatgagtctgggccggcc
atgcagaagaagaagaagggcagggcccatcggggcagtgaggaggaccccctgctctcc
cctgctgacccctggaaaggagggatagacaaccctgccatcacctctgatccagagcag
gatgacatgaagaagaaaaagaagaaaacgccaaagacaaaggaacccaaaaagccaaaa
tccaagcccccaaagcctttgtacccacccacacggaggaactgggacagcaactacttt
ggtgttcccctgcagaacctggtcaccccggaccggccaatccccttgttcattgagaag
tgtgtggactacattgaacgcactggacttaatacagagggcctgtatcgtgtgagtgga
aacaagaccgatcaagacaatattcagaagcagtttgatcaagaccacagtgtggacctg
atagtgatggacgtggctgtgaatgctgtggcgggggctctgaaggccttcttcgcagac
cttcctgatcctctcatcccctacatcttgcacccggagctggtggaggcagccaaaatt
gtggaccacatagaaagacttcaagtgctgaaagaaatagtgaggaagttccctgccgtg
aactacgaggtgtttaaatacgtcatcactcatctgaacagggtgagccagcagagtaag
actaccctgatgacggccgacaatctatccatctgcttctggcccacattgatgcgtccc
gactttgagaacaaggacacactctcaaccaccaagctcaaccagtcggtcatcgagtcc
ttcatccagcagagccactactttttctacggtggagacatccaggagagctccagcacc
gagagcaccccaccaccccatcactgtcacagcatggtggaggccctgctgcccctgcag
ctgccccctcctctccagccccaacagatccagcacagtatgtccttgcagcctgaccca
ctcatatag
DBGET
integrated database retrieval system
