Oncorhynchus tshawytscha (Chinook salmon): 112244960
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Entry
112244960 CDS
T05605
Name
(RefSeq) tetratricopeptide repeat protein 7B isoform X1
KO
K21843
tetratricopeptide repeat protein 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112244960
Membrane trafficking [BR:
otw04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
112244960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC7_N
TPR_2
TPR_1
TPR_8
TPR_14
TPR_16
TPR_12
TPR_17
TPR_19
ANAPC3
TPR_9
TPR_11
TPR_10
TPR_7
TPR_6
TPR_15
TPR-S
Iml2-TPR_39
DUF4698
ChAPs
Motif
Other DBs
NCBI-GeneID:
112244960
NCBI-ProteinID:
XP_024268633
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All DBs
Position
LG11:25308240..25370876
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AA seq
866 aa
AA seq
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MTARKSGSRLETEIERCRSEGQWDKIPELVRQLSAKLISNDDLGELLLGEAKLQQYIKEN
PIKQGASPRGPRPRLVEVHKHLTAALDRGNLKPDYMQEASMLMAKLSYVEGDYSEAINQY
GKVTLDELALVGAPVYRLSMIAEAYATKGLCLEKVPAASPSLSNRNVDKDQEVITCYEKS
GDIALLYLQEVEKALSAGMQNRSPKPGPVAQEQELGYFLETGLQRAHVIHFKNGNLTRGV
GRFREILRAVETRTTQNLRMTIARQLAEILLRGMCEQSYWSPLEDPPSQSPLDDPLLRQG
APYTKDYALSRRPRVYSGENLFCPQENTEEALLLLLISESMANRDAVLSRIPEHNSDRII
SLQSASVVYDLLTIALGRRGQYEMLSECLERAMKFAFEEFHLWYQLALSLMAAGKSARAV
KVLKECIRLKPDDPTIPLLAVKLCIGALHWLEEGECFAKMVVDMGEKASEFRAKGYLAIG
LVYSLKATDASLRGMQEEYQRKALGAFQRAQSLSPTDHLAAFYLALQLAVSRQIPEALGY
VRQALQLQGDDVHSLHLLALLLSAQKHYHDALNIIEMALSEYPESFILLFTKVKLETLCR
GPEEALLTCKHMLQIWKSCYNLTNPSDSGRGSSLLDRAIADRRTLNAMTLPDFSDPETGS
PPDANFHQYHGFYSMFSVCSVHATSMAASRVEQALSEVASSMQSSAPKHGPLHPWMTLAQ
IWLHAAEVYIGMGKPAEATACTQEAANLFPMSHNVLFMRGQVAELRGNVDEAKRWYEEAL
SISPTHVKTMQRLGLILHQLQRYSLAEKILRDAVQVNSTAHDVWNSLGEVLQAQGNAAAA
TECFLTALELEASSPILPFTIIPRQL
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgagaaagtctgggtcacgactcgagaccgagatagaacggtgccgttcggaa
gggcaatgggacaagataccagagctcgtacggcagctgtctgctaaactaatatcaaac
gatgacctgggggagctgctgctgggggaggccaagctccagcagtacatcaaggagaac
cccatcaagcagggggccagccccaggggcccaagacccaggctagtggaggtccacaaa
cacctgaccgctgccctggaccgagggaacctcaagccggactacatgcaagaggccagc
atgttaatggccaagctgtcctacgtggagggagactacagtgaagccatcaaccagtat
ggcaaagtgaccctggacgagctggcgctggtgggagcccctgtctaccgtctctccatg
atcgccgaggcatacgctaccaaaggtctgtgtctagagaaagtcccggctgcgtctccg
tccctgtccaatcgtaacgtggacaaagaccaagaagtgattacctgctatgagaagtct
ggagacatcgccctgctctacctacaggaagtagagaaggccctcagtgcggggatgcag
aaccgcagtccaaagccaggcccagtggcacaggaacaggagctgggatacttcctggag
actggacttcagagggcacatgtcatccacttcaaaaacggtaacctgacccggggagtg
ggccgcttccgggagatcctccgagctgtagagaccaggaccacacagaacttaagaatg
accatagcgcgacagctagcagagatcctgctgagggggatgtgtgagcagagctactgg
agtcctctggaggaccctcccagccagtcccccctggatgaccccctactacgccaggga
gccccctacaccaaggactacgcactcagccgccggccacgtgtctactccggagagaat
ctgttttgtccacaggaaaacacagaagaggctctgctcctgttgctgatcagtgaatct
atggccaacagagatgcggtgctgagcaggattccagagcacaacagcgaccgcatcatc
agcctgcagagtgcctctgtggtctacgacctactgaccatcgccctaggccgacgggga
cagtacgagatgctctctgagtgtcttgagagggccatgaagtttgcctttgaggagttc
catctctggtaccagctggccctttcactgatggctgctgggaagtcggcccgagcggta
aaggtactgaaggagtgtatccgtctgaagcccgacgacccaaccattcccctgctagcc
gtcaagctgtgcatcggagcactccattggctggaggaaggagagtgttttgctaagatg
gtggtggatatgggggagaaggcctcagagttccgagctaaaggttacctagccatcggc
ctggtgtacagcctcaaggctacagacgcgtccctacgggggatgcaggaggagtatcag
aggaaggccctgggtgcattccagagagcccagagcttgtcccccacagaccacctggct
gccttctacctggccctgcagctggctgtgtcacggcagatcccggaggcactggggtac
gtgcgtcaggctctgcagctgcagggagacgacgtgcactctctccacctgctggccctg
ctgctatcggcccagaaacactaccacgacgctctcaacatcatcgagatggcgctcagc
gagtacccagaaagcttcatcctgttgttcaccaaggtgaagctggagacgttgtgtcga
ggacctgaggaggctctgctcacctgcaaacacatgctgcagatctggaagtcctgttac
aacctaaccaaccccagtgattcaggtcgagggagcagcctgttggacagagccatagca
gaccgaaggacgctcaatgccatgacgctgcctgacttcagtgatccagagacgggcagc
cctccagatgctaactttcatcagtatcatggtttttactccatgttttcagtttgctcg
gtccacgccacatccatggcggcgtcgcgggtggaacaggccctgtcagaggtggcctcc
tccatgcagagcagtgcccccaaacatggacccctacacccctggatgactctggctcag
atctggctccacgcagcggaggtgtacattggcatgggcaagcctgcggaggcgacggcc
tgcacccaggaggctgccaacctgttccccatgtcccacaacgtgctgtttatgcggggc
caggtggctgagctgcggggcaacgtggacgaggccaaacgctggtacgaggaggccctc
tccatcagccccacccacgtcaagaccatgcagagactgggtctgatcctgcaccagctg
cagcggtacagcctggcagagaagatccttcgggatgcggtgcaggtgaactcgacggcc
cacgacgtgtggaacagcctgggggaggtgctgcaggctcagggcaacgctgctgccgct
acagagtgtttcctcaccgccctggagctagaggcctccagccccatactccccttcacc
atcataccacgacaactctga
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