Oncorhynchus tshawytscha (Chinook salmon): 112244963
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Entry
112244963 CDS
T05605
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112244963
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112244963
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
112244963
NCBI-ProteinID:
XP_024268635
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All DBs
Position
LG11:complement(24626247..24676515)
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AA seq
793 aa
AA seq
DB search
MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFITPHAFSDLENLRALHVNSNRLTRISNDTFS
GMSKLHHLILNNNQLMLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLHTLSLDH
NMIDYIPEETFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNPSSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVLE
GQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSPDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVNPSVSKQAMGGSGSVG
GGGGSIKAAGHAPDTLTDSSETSLPDCSTATSLVSQSWNTPGSSGSLKPKRKPAPKPSAT
ASVTPEPKIEALPNAETQNTNRNNSTALQHPPAPVFHSPLPYSRIKDTPILRRAHPRPSS
KYLTLPVEGVRAKRRYSLNEDSSKHHCYIGGTKLGNMWSKRSKSMNGMLLQQENIDSGKA
TFSSSEWILESTV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttattggaatggcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaatcttgcaaccctctgtgccaaaaaa
ggtctcctctttgtccccccgaacattgacaggcacaccgtggagctacgtctggcagac
aacttcgtcaccagcatcaagaggaaagactttgccaacatgaccaggttgcaggacctc
accctgtcaaggaataccattagcttcatcacgccacacgcgttttctgacctggagaac
ctccgcgccttgcacgtgaacagcaaccggctgacccggatatccaacgacacctttagc
ggcatgtccaagctgcaccacctgatcctcaacaacaaccagctgatgttgatccacctg
ggggctttcaatgatctgctggccctggaggagcttgacctgtcctacaacaacttggag
tccatcccctgggaggctatccagaggatgacgagcctccacaccctcagcctggaccac
aacatgatcgactacattcctgaggagaccttttctcttctgcaaaagctcaaccgcttg
gacgtaacctcaaataagttacagaagcttcctccagatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaacccttcctcgttcgcactgagcttcggcgggaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagtcgagaggatgatctg
gagacatgcgcatcgccgcagcacctctctggacgctatttctggtccatcccagaggag
gagttcctgtgtgaacctcctctcatcacccggtactcccatgagatgagggtgctggag
ggccagagggtggccctgaggtgcaaggccaggggggaccctgagcctgccatacactgg
atctctccagaggggaagctggtgtcgaactcctcccggacgttggtctacacgaatgga
accctggacattttgatcagcactgtgaaggacacaggatccttcacctgcatctcgtcc
aacccggcgggtgaggcacatcagactgttgagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcttcagacatctccacgtcc
accagggctggggcaaatggcagcaaccacactggagacaccaaaactagtccggataag
agagtggtcatcgctgaggccacatcctccacagcactcatcaagttcaacttccagagg
aatatacctgggatccgcatgttccagattcagtacaatggcagttatgatgactctctt
gtgtacagaatgattccccccacaagcaaaaacttcctagtcaataacctggctgctgga
acgtcgtatgacctgtgtgttctggccatctacgacgacggtatcacttccctcaccgcc
acccgcgtggtgggctgcgtccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggcggcatcatcgtggcc
tccgtcctcgtcttcatcatcatcctcatgatccgctataaggtctgcaacaccagtgac
tcgggcaaaggcacattggtcaccaacgtccactcccagaccaatggggcgcagtctcaa
gggtgcaccgtcaatccctctgtgtccaaacaggccatgggagggtcggggtcagtggga
gggggaggagggtctataaaggccgctgggcacgcgccagacactctgacggactcatct
gagacctctctcccagactgctccactgctacttctctggtgagccagagctggaacacg
cctggctcctcagggtctctgaagccaaagcgcaagcctgcgccaaagccctccgctact
gcttctgtcacccctgagcccaagatagaggccctccccaacgctgagacccagaacacc
aaccgcaacaactccacggctctgcagcatccccccgccccggtattccactccccccta
ccctactcacgcatcaaggacacgcccatattaagacgcgcacaccccagaccatcctcc
aagtacctgaccttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgag
gactcgtccaagcaccactgctacattgggggaacaaaacttgggaatatgtggtctaag
cggagtaagtccatgaatgggatgctacttcaacaggaaaatatagacagtggcaaggcc
accttttccagttcagagtggattctagaaagtactgtgtga
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