Oncorhynchus tshawytscha (Chinook salmon): 112245086
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Entry
112245086 CDS
T05605
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04517
IgSF CAM signaling
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
112245086
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112245086
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112245086
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112245086
Intermediate filaments
Intermediate filament-binding proteins
112245086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
112245086
NCBI-ProteinID:
XP_024268799
UniProt:
A0AAZ3Q992
LinkDB
All DBs
Position
LG30:complement(19912403..19939287)
Genome browser
AA seq
1566 aa
AA seq
DB search
MLMGAGRDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIDEKPELRSVVQ
QKLEEIRECWTDLESTTKAKARALFENNKPEPVVKSYSDLDHQLSGLEKQPPQLEQAHHL
PTFNEQLQKFQSQMGNLYKDVGELGSLQGVCLPQRGSLVKGGEGEGGEQPAVVETRIVRL
IEPLKERRRILLASKEMHQVAQDLEEEILWIQERLPLASSKDYGNNLQSVQQHVKINQTL
QRDLQGRQARVEEVLDRAGIIASLRTPEVDFVREGAGHVRQVWEVLRLEAERRSVMLDVV
LLAQQYYSEAAKVESWLAGQKLHLINEEKGTDEESTLQLLKEHLALEATVENYAETVGML
SQQCQRQLELGHPDSEGITKQQSHIDRLYVSLKDMVEHRKTKLEQQYWMYQLNREVEELE
KWITEREAVASSTELGQDLEHVTMLQEKFTKFCSETNSTGQQRMEQVNKMVNEMIDCGHT
DAATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQTAGKMRQLPEV
RACQASIANPATLQRLMLSFEHALQLLVSQVRQLQENAAQLRTIYAGEKAEAIMSKEQEV
MSAWKELLVSCEASRVQVTSVTDKVQFFSVVREQLMWMEGIMGQIGGDDPRDSSSAEVMM
KQHGELKAKMDGRRKTIQQCVELGKILLAAGNPASEEIKEKLDALLAKQKDLSERWDKQQ
EKLQRKKDQFQYAQETVKAEAWLKAKEPLISPSSSSRVAGGAGGDAQVQTDEVEQLILRH
EAFRNAAATWKERFSSLRQLSNAEKLREEQSSKPSPMPLSSRRMFPSSCLTPTIPLATST
LLRQTVQVHIEPRPKQTSLEMSASASASSAAQRLGSTIASYAPVINGSGYHGLDNQSSSG
GLESSNYPGLNHPGSGGVDSSSSYLGGNHQTGSPPVDSSGYLGLNHQNSGGMVSPGYLPQ
NQSSGGMCGPGYLPQNQSSGSMGSPGYLPQNLSSGSMGSPGYLPQNQSSGGMGSPGYLPQ
NQSSGGMCSSGYLPQNQSSGGIGSSGYLPQNQSSGGMGSSGYLAQNQNSVGIGSSGYLGK
NQSSGGMGSTGYLAQHQGSGSMGSSGYLAQSVGGMGSSSYLPQSGGVMDPKMAYAWQHLK
ADCMQPRINHMHKAVNPLLEASRAQREQFGDIPMVDMIGPESGLDLLHGRLQRDPRGSRS
DPQMDHLRREREYKLGRQTSSEQEIQARLNELPMIVRQERYRRRLERQSSSEQEGSGKAR
TPRQDDSSDMESAKEGSDKRSIEKRATTMAEIVEQAQEREAAQARGEMYRPTSSLSAPVT
YERPRARDRPKPRRRPRPKEPEEKRRSRSAPAQSPAQLLPPSHTAHNEGFLYRKHDFEGH
QKSPSSKSWVNLYCVLTKGGITFYKDAKSTTTPYNEETPLDLSVCICDSTIGYKKKKNVF
VIKKNDGNDYIFHAKDEEDLKAWVTNITTSITEHEEIAKWDKPTTSSTDPDRSERKEKSE
GDADARSERSEMGGEVEEEERSEKERSEKGEGSKKTGEGSEKADTSERGERAEGGAGGSS
TSGKSK
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgggtgcgggacgagacacggcgcgggatgaggcccagaagcttcacaggaag
tggctgaagcaccaggccttcatggccgagctggcccgcaacaaagaatggctggccaag
atagagcaggagggccaggagctgatcgatgagaagccggagctgcgttcggtggtgcag
cagaagctggaggagatcagggagtgctggacggacctggagagcaccaccaaggccaag
gcccgggctctgtttgagaacaacaagccagagccggtggtgaagagctactcagacctg
gaccaccagctctctggcctggagaaacagcccccccagctggagcaggctcatcaccta
cccaccttcaacgagcagctgcagaaatttcagtctcagatggggaacttgtacaaggat
gtaggggaactagggtccctccagggggtgtgcctcccccagcgaggcagcctggtgaag
ggtggcgagggagaagggggcgagcagccagccgtagtggagacccgcatcgtgcgtctc
atcgagcccctgaaggagagacgacgcatcctgctggcctccaaagagatgcaccaggtc
gctcaggacctggaggaagagatactgtggatccaggagcggcttcctctggcctcctct
aaggattacggcaacaacctgcagagtgttcagcagcatgtcaagatcaaccagacactg
cagagggatctgcaggggcgccaagcacgggtggaagaggtgttggaccgggcggggatc
atcgcctctctgcggacccctgaggttgactttgtgcgtgagggagcggggcatgtgcgt
caggtgtgggaggtgctgaggctggaggcggagaggaggtctgtgatgctggatgtggtg
ctgctggcccagcagtactacagcgaggcagccaaggtggagtcctggctggcaggccag
aaactgcacctcatcaatgaggagaagggcacggacgaggagagcaccctgcagctgctg
aaggagcacctggccttggaggcgacagtggagaactacgctgagacagtgggcatgctc
tcccagcagtgtcagcgacagctggagctggggcacccagatagtgaggggatcaccaag
cagcagtcccacatagaccgtctgtatgtgtctctgaaggacatggtggagcacaggaaa
accaagctggagcagcagtactggatgtaccagctcaacagagaggtggaggagttagag
aagtggatcactgagagggaggccgttgccagctccactgagctgggtcaagacctggag
catgtcacgatgctacaggaaaaattcaccaagttctgctcagagaccaacagcacaggc
cagcagaggatggagcaggtgaataagatggtgaatgagatgatagactgtggccacacg
gacgcggccaccatagctgagtggaaggatggactgaacgagtcatgggctgacctactg
gagctcatggagacccgaagacagatgctggcagcatcacaccagctgcacaagttcttc
accgactgcaaagaggtcttggctcagactgcggggaagatgaggcagttgccagaggtg
agggcgtgccaagccagcatcgccaaccctgccaccctgcagaggctcatgctctccttc
gagcacgccctccagctgctcgtctcacaggtaaggcagctgcaggaaaatgcggcccag
ctgaggaccatctatgccggagagaaggctgaggccatcatgagcaaagagcaggaagtg
atgtcagcatggaaggagttactggtttcctgtgaggccagtcgtgtgcaggtcacctcg
gtgacagacaaggtgcagttcttctcggtggtgcgcgagcagctcatgtggatggagggc
atcatgggacagattggaggggacgaccccagggactcgtcttctgcagaggtgatgatg
aaacagcatggtgagctgaaagccaagatggatggccgtaggaagacaatacagcaatgt
gtggagctaggaaagatcctgctggccgcaggcaacccagcctccgaggagataaaggag
aagttggatgctctcctggctaagcagaaggatctctctgagagatgggacaaacagcag
gagaagctacagcgcaagaaggatcagttccagtatgcccaggagacggtgaaggcggag
gcctggctgaaggccaaggagcccctgattagccccagctcctcttctagggtggctggg
ggggctggaggagacgcccaggtccagactgatgaggtggagcaactcatcctccgccac
gaggccttccgcaatgctgcagccacctggaaggagcgcttcagctcactgagacagctc
tccaatgcagagaagctgagagaagaacagagcagcaagccttccccaatgccactctcc
agtcggaggatgttcccatcatcctgtctcactccgaccattcctcttgctacctcaact
ctgctgagacagacggtccaggtgcatattgagcccaggcccaagcagaccagtctggag
atgtctgcgtctgcctctgcctcctctgcagcccaaaggctgggttctaccatagccagc
tacgctccagtcataaatggctctggttaccatggactggacaatcagagcagcagcggg
ggattggagagttccaactaccctggactgaaccatccgggcagtggaggagtggacagc
agctctagttaccttggagggaaccatcagactggctccccgccagtggatagttctggc
taccttggactgaaccatcaaaacagtgggggtatggttagtccaggctacctacctcaa
aaccaaagtagtgggggtatgtgtggtccaggctacctacctcaaaatcaaagcagtggg
agtatgggtagtccaggctacttgccgcaaaatctaagtagtgggagtatgggtagtcca
ggctacctgccacaaaatcaaagtagtgggggtatgggtagtccaggctacctgccgcaa
aatcaaagtagtgggggtatgtgtagttcaggctacctgccgcaaaatcaaagtagtggg
ggtataggtagttcaggctacttgccgcaaaatcaaagtagtggtggtatgggtagctca
ggctaccttgcacaaaatcaaaacagtgttgggattggtagctcaggctaccttgggaaa
aatcaaagtagtgggggtatgggaagtactggctaccttgcacaacaccaaggtagtggg
agtatgggtagttcaggctaccttgcgcaaagtgttgggggtatgggtagttctagctat
ctgcctcaaagtggtggggtcatggaccccaaaatggcatatgcgtggcagcatctgaaa
gctgactgcatgcagcccaggatcaaccacatgcacaaagctgtcaaccccctcctggag
gccagcagggcgcagagggaacagtttggggacatccccatggtggacatgatcgggcca
gagtctggcctggatctcctccacggcaggctccagagagaccctcgcggcagccgctcc
gacccccagatggaccacctgcggcgggagagggagtacaagctgggacggcagacctcc
agcgaacaggagattcaggcgcggctcaacgagctgccaatgattgtgcgccaggagcgc
tataggcggcgtctggagaggcagtcgtccagcgagcaggagggcagtgggaaggcgagg
acaccgaggcaggacgactccagcgacatggagtcagccaaggaaggctccgacaagcgc
tcaatagagaagagagccaccaccatggctgagattgtggagcaggcccaggagagagag
gcagcacaagctcgaggggagatgtaccgccccaccagcagcctctcagcacccgtgacc
tacgagcgcccgcgagcccgagaccgccccaaaccccgcaggagaccccgccccaaagag
cctgaggagaagcgacgctctcgctcggctccggcccagagcccggcacaacttctgcca
ccctcacacactgcccataatgaaggcttcctgtaccgcaaacacgactttgaggggcac
cagaagagtcccagcagtaagtcctgggtgaatttgtattgcgtgttgacaaagggaggg
atcactttctacaaggacgccaagagcaccaccacaccttacaatgaagaaaccccactc
gacctgagcgtctgtatatgtgatagcaccataggatacaagaagaagaaaaatgtcttc
gttatcaagaaaaatgatggcaatgactatattttccatgcaaaggatgaggaggacctg
aaggcttgggtcactaacatcaccaccagtataactgaacatgaggagatcgccaagtgg
gacaagcccaccacctcgtccacagatcccgaccgctcggagaggaaggagaagtcagag
ggcgacgcagacgccaggtcagagaggtctgagatgggaggagaggtggaggaggaggag
aggtcagagaaagagaggtctgagaagggagaggggtccaagaagacgggagaaggctca
gagaaagcagacacgtcggagaggggtgagagggcagaggggggggcagggggctccagc
acgtcagggaagagcaaatga
DBGET
integrated database retrieval system
