Oncorhynchus tshawytscha (Chinook salmon): 112245098
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Entry
112245098 CDS
T05605
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112245098
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112245098
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112245098
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112245098
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112245098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
DUF11
UBA_4
Motif
Other DBs
NCBI-GeneID:
112245098
NCBI-ProteinID:
XP_042164916
LinkDB
All DBs
Position
LG30:19633469..19692707
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AA seq
1181 aa
AA seq
DB search
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSHGDLAEAVAFLTEKKAKV
PQQDEATYYQTTQVGNDRYISVGSQADTSEYLPHPALPGAGPSQGDTNVIDLTGDDKDDL
QRAIALSLEESSRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHDRK
RMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLHYSPPARVQDLPRNQKEHRNLPFM
QELRNLFSLMVGSKRKYVDPSCAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQMKA
EEDREGEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMI
EGEIESLHSSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHSKLEFPSMLY
MDRYMDRNREITRIKREEIRRLKEHLTLLQQRLERYLSYGSGPKRFPLADVLQYAMEFTS
SKPVCTSPVGDIDTSAPPGGTTGQLLSASSTAEQGPSTPPEGLALALALTPAPSTQQRVP
IHKPFTQSRLPPDLPMHPAPRHITEEELQVLEGCLHRWRSEVENDTRDLQGSISRIHRTI
ELMYSDKSMMQVPYRLHAVLVHEGQANAGHYWAYIYDPHQRCWMKYNDISVTKSSWEELV
RDSFGGYRNASAYCLMYINDKKPFLIEEEFNKETGQMLSGLDKLPPDLKAYVKEDNGLFD
KEMEEWNTLQARKAQQEKLALAVATAATAAVAETTATTTSSQPMSTEPSTPDNSAPQQDP
EYMEQPSPTDYSRHLQEDTERAISKAAAEQQEERSPEGLLTALSPQSCGESVSPRLPPQP
EIKVNPETPLVPPSDPPVKDKAPAHRIVEVAIPQAMMTPNMQGIIMSIGKARTVFEKLGP
EAAFFKAIKVEYTRLLRFSQEDTAPGSDYRLQHVIVYFIQNQAPKKILERTLLMQFADRN
LGFNERCKSIMKVARAKLDLIKPEEINMEEYEMWHQDYRNFRETTIFLMIGLELFQKKSF
VEALMYLIYSYQYNRELLVKGLYRGHDDELIGLYRRECLLKLNENAAGMFESGEEPEVSN
GLSIMNELVVPCIPLLLVHDIEKDLVSVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLD
CSTEIKSFHDPPKLPTYSTLELVERYSRVMASLSRVPADGR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaatgtcctccaacagcattcgcagaagcatcagcagactcttctg
aaccagctgcgggaggtcacaggcaccacagacgtacagctacttcagcaggccctgcag
gtcagtcatggagacctggcggaggcggtggcctttctgacggagaagaaggccaaggtg
ccccagcaggatgaggccacctactaccagaccacccaggtgggcaacgacagatacatc
agcgttggcagccaggcagacaccagtgagtacctacctcacccagcgctgcccggggca
ggccctagccagggagatactaacgtgattgacctgacaggcgatgacaaggatgacctc
cagagggccatcgctctcagcttggaggagtccagccgggccttcagggagacgggcatc
actgatgaggagcaggccatcagcagagttctggaggccagcatagcagagaacaaggca
agcctaaagcggacacacacggaagtgtggagtgactcacccaatccccacgacaggaag
agaatggagaactgccctgtgggtctaaagaacgtgggcaacacctgctggttcagcgcc
gtcatccagtctctgttcaacctgctggagttccagaggctggtgctacactactcccct
cctgccagagtccaggacctgcctcgcaaccagaaggagcacagaaatctacccttcatg
caggagcttaggaacttgttctccctcatggtgggttctaagaggaagtacgtggacccg
tcgtgtgccgtggagatcctcaaggacgccttcaagtccagcgagtctcagcagcaggat
gtgagtgagttcacacacaagctgctggactggctggaggatgccttccagatgaaggca
gaggaggaccgagagggtgagaagccaaagaacccgatggtggagctgttctatggccgg
ttcctggctgttggtgttctcgaaggaaagaagtttgagaacactgagatgtttgggcag
taccccctgcaggtgaatggctttaaggacctgcatgagtgtctggaggcggccatgatt
gagggggagatcgagtccctgcactcatcagcagagaactctgccaagtctggacaggag
cactggtttaccgaactccctcctgtcttgacctttgaactgtcaagatttgagttcaac
caagctttgggtcgacctgagaagatccacagcaagctggagttcccctccatgctgtac
atggacaggtatatggacaggaaccgagagatcaccaggattaaacgggaagagatcagg
agactgaaagagcacctgactctactccaacagcgtctggagaggtatctgagctatggc
tccggccccaagaggtttcctctggcagatgtcctgcagtacgccatggagtttacttcc
agtaagccagtctgcacctctcctgtgggggacattgatacatcagcaccccctggtggc
acaacagggcaactgctgtccgcttcaagcacagccgaacagggtccctctacccctcca
gagggtttggccctcgccctggctctcaccccggccccctccacccagcagagagtgcct
atccacaagcccttcacccagtcccgactgccccctgacctgcccatgcacccggcccca
cgacacatcactgaggaggagctccaggtgctggagggctgcctgcaccgctggaggagt
gaggtggagaatgatacccgtgatcttcagggcagtatatccagaatccacaggaccatt
gagcttatgtactctgacaagtccatgatgcaggttccgtaccggctgcatgcggtgttg
gtgcatgagggccaggccaatgctggacactactgggcctacatctatgacccccaccag
cggtgctggatgaagtacaacgacatctcagtcaccaagtcctcctgggaggagctggtc
agggactcgttcggaggctatcgcaacgccagcgcctactgcctcatgtacatcaacgac
aagaaacccttcctcatagaagaggagtttaataaggagacgggccagatgctgagtggt
ctggataagctccccccagacctgaaggcctacgtgaaggaggacaacggcctgtttgac
aaggagatggaggagtggaacacactgcaggcacgcaaggcccagcaagagaagctggcc
ctggctgtggccaccgccgcaaccgctgcagtagcagaaacaacagcaacaacaacgtcc
tctcagcctatgagtacagagcccagtacaccagacaactcagctccacagcaggaccca
gagtacatggagcagccgtcccccacagactactccaggcacttgcaggaggacaccgag
agggccatctccaaagctgcagccgagcagcaggaggagaggagccctgagggactgctt
actgcactctctccacagtcctgtggggagagtgtctccccacgccttcccccccagcct
gagatcaaggtgaaccctgaaacccctctcgtgcctccgtctgacccccctgtgaaggat
aaggcccctgcccaccgtattgtagaggtggccatcccccaggccatgatgactccaaac
atgcagggtattataatgtccattggcaaagcaaggactgtgtttgaaaagcttgggcct
gaagcggccttcttcaaggccattaaggtggagtacacccgtctgctgaggttttcccag
gaggacacagccccggggagtgactaccgactgcagcacgtcatcgtctacttcatccag
aaccaggcccccaagaagatcctggagagaaccctcctcatgcagtttgccgaccgaaac
ctgggctttaacgaacggtgtaagagcattatgaaagtggcacgtgccaaactagacctc
attaagccagaggagatcaacatggaggagtatgagatgtggcatcaggactacaggaat
ttccgtgagacaacaatcttcctgatgattggcttggagctgttccagaagaaaagcttt
gtggaggcattgatgtacctgatctactcataccagtacaacagagagctgttggtcaaa
gggttgtaccgaggtcacgacgatgagctcatagggctctaccgcagagagtgcctgctg
aaactgaacgagaatgcggcggggatgtttgagtctggtgaggagccggaggtgagcaac
ggcttgagcatcatgaatgagctggtggtgccatgcatccccctattgctggtccacgac
atagagaaggacctggtgtctgtggaggacatgaggaaccgctggtgctcctacctggga
caagaaatggagcctaaccttcaggagaagctgactgacttcctccccaagttacttgac
tgctcaacagagatcaaaagcttccacgaccctcccaagctgcccacctactccacccta
gagctggttgagcgctacagccgtgtcatggcctccctgagccgggtgcctgcagacggg
agatga
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