Oncorhynchus tshawytscha (Chinook salmon): 112245388
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Entry
112245388 CDS
T05605
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00071
Fatty acid degradation
otw01212
Fatty acid metabolism
otw03320
PPAR signaling pathway
otw04148
Efferocytosis
otw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112245388
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
112245388
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
112245388
03320 PPAR signaling pathway
112245388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112245388
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
112245388
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
112245388
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
112245388
NCBI-ProteinID:
XP_024269206
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Position
LG06:complement(34154973..34168716)
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AA seq
773 aa
AA seq
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MAEAHQAVGFQFTVTSDGIDLHLSREVLKHIYLSGVTSWTKRAIRFKNGILTGVYPASPS
SLLIVVIAIMSTIYAKIDPSLGMIDTIKRTMSVSGYMTVQTQTVLSAILFSTGLWLSLIL
MLRYILKALLSYHAWIFESHGKISFCTKLWLSLVKMFSGRRPLLYSFQTSLPRLPVPSVD
DTITRYLESVRPLLDDEQYNQMEVVANDFKKDQAPKLQKYLILKSWWATNYVSDWWEEYI
YLRGRSPIMVNSNFYSMDLLYVTPTHRQAARAGNVVHAMLQYRRKLERREHAPLRALGVV
PMCSYQMERMFNTTRIPGIETDFVQHLSDRKHLVVYHKGRFFKVWLYYGGRHLWPSELET
QFQRILDDTTEPQPGELKLAALTAGNRVPWARARLKYFSQGVNKASLEAIETSAFFLSLD
DEVHGYDPDKLRSLDLYAKSLLHGKCYDRWFDKSFTLIAYKNGKLGVNAEHSWADAPIIG
HMWEYVLATDCFHLGYTEEGHCKGDINKGLPPPTKLQWDIPLECQEVIEESYMVAKVIAD
DVDFHGCLFDEFGKGLIKKSRTSPDAFIQLALQLAQFRDKGEFCLTYEASMTRMFREGRT
ETVRSCTSESTAFVRAMEDKNTASAQKLDLFRKAADKHQNMYRLAMTGSGIDRHLFCLYI
MSKYLSIDSPFLKQVLSEPWRLSTSQTPQQQLNMVDIKTFPRYVGAGGGFGPVADDGYGV
SYIIIGENLITFHISSKFSSPETDSYRFGQNIRQAMLDICALFDQKDKNEKEM
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcacatcaggcagttggcttccagttcaccgtcacctcagacggcatcgac
ctccacctgagccgcgaggtactcaaacacatctacctgtcgggagtgacgtcatggaca
aagcgcgccataagatttaaaaatgggatattgacaggtgtctaccctgccagcccatcc
agtttgctgatcgttgtgatagccataatgagcaccatatatgccaagatagacccatca
ctgggaatgatagacaccatcaagaggaccatgtctgtcagtggctacatgacagtgcag
acccagacagttctgagtgccatcctgttttccacaggcctgtggctctctctcatcctc
atgctgaggtacattctcaaggcccttctctcctaccatgcctggatctttgagtcccat
ggcaaaattagcttctgcaccaaactctggctgagtctggtgaagatgttctctgggcgc
agacctctcctctatagcttccagacctccctacccagactacctgtgcctagtgtggat
gacaccataaccaggtacctggagtcagtgcgccccctgctggatgatgagcagtacaac
cagatggaggtggtggccaatgacttcaagaaggaccaggcacccaaactccagaaatac
ctcatcctcaaatcctggtgggctactaactatgtgagtgattggtgggaggagtacatc
taccttagaggcaggagtcccatcatggtcaacagtaacttctactccatggatctgctg
tacgtgactcccacacacagacaggcagctcgggcagggaatgttgttcacgctatgctg
cagtaccgccgcaaactagagagaagagaacatgcaccgttgagggctctgggggtggtg
cccatgtgttcttatcagatggagaggatgttcaacaccacacgtatccctggtatagag
acagactttgttcagcacctgagtgaccggaagcacctggtggtgtaccataagggccgc
ttctttaaggtgtggctgtactacggggggcgtcacctctggccctctgagctggagact
cagttccagaggatcctcgacgacaccaccgagccacagcctggggaactcaaactggct
gccctcacagccggcaacagagttccgtgggcgcgggctcgtctgaagtacttcagccag
ggtgtcaacaaagcctctctggaggccatcgagacgtcagctttcttcctcagccttgat
gacgaggtgcatggttatgaccctgacaagctgaggtcattggacctgtatgccaagtcc
ctgctgcacgggaagtgctatgacaggtggtttgacaaatctttcactctgatcgcttat
aagaacggtaaactgggggttaatgcagaacactcgtgggcagacgctcccattatagga
cacatgtgggagtatgtcctagcaacggactgcttccatttgggctacacagaggaggga
cactgcaaaggagacatcaacaagggcctgcctccccccaccaaactacaatgggacatt
ccactggagtgccaggaggtcattgaggagtcctacatggttgccaaggtgatagctgat
gacgtggactttcatggctgtctgtttgatgagtttgggaaaggcctgatcaagaagagt
aggaccagtcctgatgccttcatacagctagcactacagctggcccaattcagggataag
ggggagttctgtctgacgtatgaggcctcaatgacccggatgttccgtgagggtaggaca
gagacggttcgctcctgcacctcagagtccacagccttcgtcagagccatggaggacaag
aacactgcgagtgcccaaaagttggacctcttccggaaggccgcagacaaacaccagaac
atgtaccgtctggccatgacaggctctggcatcgacagacacctcttctgtctctacatc
atgtctaagtacctcagcatcgactcaccattcctcaaacaggtgttgtcagaaccctgg
aggttgtccactagtcagactcctcaacagcagctcaacatggttgacataaagacgttt
cccagatacgtgggcgcggggggggggttcggccctgtggctgatgacggctatggcgtc
tcttacatcattataggagagaacctgatcacattccacatctccagcaagttttccagc
cctgagacggactcgtaccgctttggacagaacattcgacaggccatgctggacatttgt
gcgctattcgaccaaaaagacaagaatgagaaagagatgtga
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