Oncorhynchus tshawytscha (Chinook salmon): 112245530
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Entry
112245530 CDS
T05605
Name
(RefSeq) myomesin-2-like
KO
K24495
myomesin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112245530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112245530
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112245530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
Pur_ac_phosph_N
V-set
C2-set_3
Motif
Other DBs
NCBI-GeneID:
112245530
NCBI-ProteinID:
XP_042166826
LinkDB
All DBs
Position
LG32:complement(10742497..10756432)
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AA seq
1371 aa
AA seq
DB search
MATKVMHFNQKKHVSHVSHHSSHTTKHVVKEHSSRKSSSKSVNQVQHTHATEAMAEPAYT
VPAFSQRSTDEIEEYQRVSSHVGKGLASIQKELHRMRVATKTQVENIAIKREVQEMMHKK
GTSSTETDKAPDFLVALRPHAAWEKTPVKLFCTVDGHPRPIVKWYKGGKPVDPLSAPGKY
KIESKYGVHSLIISRCVVSDTAEYSAVATNSHGSTTSKAFVTVNRPAGGAYGSCQLSGQV
PHLTVIHHSKLEITMLDRFGVSFGTEGGSISLVCTMVVVPDLPNVPPLAQWYRDDKLLKA
GKLAEIKVGGGAATLTLPLLAKDDEGLYTLRMWTKDGTTEHSAYLFVKDAAPSVAGAPGA
PISVKAFDINSDYVLVAWKPPNTTNEAAITGYFVDKRESGSATWSQCNDASVRICKYPVH
GLSVGHAYHFRVRAVNSAGISRPSRESDKVTALDPAERERLQVIKLESKHEVVIKEDDLE
GVPSAPGQVVATRNTKSSVFVQWNPPKHPNHLIGYYIDASLVGSKAWAPCNHKPYKHTRF
VVHGLTPGETYVFRVQAVNIYGLSDESQESTPIAVESALTTPSAPHGITMLSCDGASMII
AWKSPKHCGGSKINAYYVDKRDADTLAWKEVNSAPTKTKTYTVDGLTEGTFYEFKVQAGN
LAGVGVPSAPSTPLKCEAWTSAVPGPAYDLALREVRGDSLVILWKAPVYTGASAITGYIV
EMAKKGHHYHPLNEEAIGHCYLQVTGLEAGAEYTFKVKAVNAEGVGKASQASEPVVAKAL
PGTQEIQCGVDEDTGDIFLSFEACEISETSNFAWSKNYKEISDCPRVAIETKGKHSKLTF
VNPDVSDLGAFSVVVTDTDGVSASHTVTEDALNTMLELSYNIRHPIVPLKHQLNYEVLEK
GHVRFWLQCLKMSPAVTYRFIVNDKEVTSSDSHKISHDVNTRVIQMTVDHFSKASEATYT
VQIHDGRAKNQSSLVLLRDVFKAVLKEAEFQRSEHIRKQGPHFAEYLSYHVDDDCTVLLV
CKVANVKKETVFHWFKDEEEIVLATPPNVMSGSVALPISLFSRKDQGHYKAKLSDDRGKD
TSVFDISGQVFDDIINAIAHIAGSSASELVLQCTPEGIRLQCYMKYYTEEIRTAWLHKDS
KISSSEKMRIAGTAEMAWMQIREPSEKEKGHYSIQIMDATKSHTRTFDLSGQAYTDAYEE
YLRLKAAAFAEKNRGRVVGGLPDVVTIMEQKTLSLTCTVWGDPSPEVTWFKNENEVVSTE
HAKITLEANKFASLTITAVTPEDSGKYSINVRNKYGGEFVEITVSVYKHGESPPEPKMGG
RGATPAPLASKTPAQTPTPAQTPIPQTPTPSLKSPTPSLRSPTPTAKSPTP
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaggtcatgcattttaatcagaagaagcatgtgagccacgtcagccatcac
agctctcacactactaagcatgttgtcaaggagcactcttcaaggaaatcaagctctaag
tccgtgaaccaggtgcagcacacccacgccacagaggctatggctgaaccagcctataca
gtgccggcgttcagccagaggagcaccgatgagatagaggagtaccagcgagtgtctagt
catgttgggaaaggacttgcttcaattcagaaggagctccacaggatgcgagtggccaca
aagacccaagtggagaatattgcgattaagagagaggtgcaggagatgatgcacaagaag
gggacgtcgagtacggagacggacaaggcccctgacttcctggtggctctgaggccccac
gccgcgtgggagaagactcctgtcaagctgttttgcaccgtggacggtcaccccaggcct
attgtcaaatggtataagggaggaaaacctgttgacccactgagtgccccaggaaagtac
aagattgagagcaagtatggagtacacagtctgattattagcaggtgcgtggtgagtgat
actgcagagtacagcgccgtggcaacgaactcccatggatcaacaaccagcaaggccttt
gtcactgtcaatagaccagcaggaggagcctatgggtcctgccagctttctggtcaagtg
ccccacctgactgtgatccaccacagtaagctggagatcaccatgctggataggtttgga
gtgtcgttcggaacagagggaggttccattagtctggtgtgtaccatggtggtggtccct
gatctgcccaacgtaccaccattggcccagtggtacagagacgataaactgctgaaggct
gggaagttggctgagattaaggttggtgggggcgctgccactttgactttgcccctcctg
gccaaggatgatgagggtctgtacaccctccgcatgtggacaaaggacggcaccaccgag
cacagcgcctacctctttgtgaaagatgctgctccctctgtggccggagcacctggtgca
ccaatcagcgtcaaggcgtttgacatcaactcggactacgtcctggttgcctggaaaccc
cccaacaccaccaacgaggctgccatcaccggatactttgtggacaaacgtgagtctggt
agtgctacctggtcccagtgtaacgacgcctcagtgcggatctgtaagtaccccgtgcac
ggcctgagcgtgggtcacgcctaccacttccgggtcagggctgtcaacagtgccgggatc
agcagaccgtcccgggagtctgacaaggtgactgccctggacccagctgagcgagagaga
ctgcaagtgattaaactggaatcgaaacatgaagtagtgattaaagaggatgacctggaa
ggtgttccctccgctcctggtcaggtggttgccaccaggaacaccaagtcctctgtgttt
gtgcagtggaaccctcccaaacaccccaaccatctcattgggtactacatagatgcctct
ttggtgggatccaaggcctgggccccatgcaaccacaagccctacaagcacaccaggttt
gtggtccatggactgaccccgggggagacctatgtgttccgtgtccaggctgtcaacatc
tatggcctcagtgatgagtcccaggagtctactcctattgctgtggagtccgccctcacg
actcccagtgcacctcatggcatcaccatgctgagctgtgacggagcctccatgatcatt
gcctggaagagccccaagcactgcggtggctctaagatcaacgcctactatgtcgacaag
cgtgatgcagacaccctggcatggaaggaggtcaactctgcccctaccaagaccaagact
tacacggtcgacggtctaacagagggaaccttctacgagtttaaggtccaggctgggaac
ctggcaggtgtgggcgtgccctctgctcccagcacacctctgaagtgtgaggcctggact
tctgcagtacctggtccagcctatgacttggccctcagagaggtcagaggtgactccctg
gtcatcctgtggaaggcccctgtctacaccggcgccagtgccatcactggatacatcgtg
gagatggccaagaagggccatcactaccaccccctgaatgaagaggctattggccactgt
tacctgcaggtgactggtctggaggcaggagcagagtatacgttcaaagtgaaggctgtc
aacgctgagggagtaggaaaggcctcccaggcatctgagccagtggtggccaaggctctg
ccaggcacccaggagatccagtgtggagtggatgaggacactggtgatattttcctgtca
ttcgaggcctgtgagatttctgagacctccaactttgcttggtctaagaactacaaagaa
atcagtgactgtccaagagtcgccatagaaactaagggcaaacactctaagctgactttc
gtcaacccagacgtgagtgatttgggtgccttctctgtggttgtgactgacactgatgga
gtttctgccagccacaccgtgacagaggatgccctgaacaccatgctggaactcagctac
aacatcagacatccaattgtcccactgaaacaccaactgaactatgaggttctagagaag
ggccacgtgcgtttctggctgcagtgcctcaagatgtcacccgccgtcacctataggttc
attgtcaacgacaaggaggtcaccagcagtgatagccacaagatcagccatgatgtgaac
accagggtgatccagatgactgtggatcacttctccaaggccagcgaggccacctacacc
gtccagatccacgacggcagagccaagaaccagagctctctggtcctgttgagagatgtg
ttcaaggctgtcttgaaggaggctgagttccagaggtcagagcacatccggaaacaaggt
ccccactttgctgagtacctttcctaccatgtggatgacgactgtactgttctgctcgtc
tgcaaggttgccaatgtgaagaaagagactgtgttccactggttcaaggatgaggaggag
attgttctggcgacccctcctaacgtgatgtctggatctgttgctctccccatctccttg
ttctccagaaaagaccagggccattacaaagctaaactcagtgatgacagagggaaagac
acttctgtctttgacatttctggccaagtatttgatgatattatcaacgccattgcccac
attgctgggtcttctgcctctgagctggtgcttcagtgtaccccagaaggcatcaggctc
cagtgctacatgaagtactacacagaggagatcaggactgcctggttgcacaaggatagc
aagatctcgtcgtctgagaagatgaggatcgccggcacagctgagatggcctggatgcag
atcagggagccatcagagaaggagaagggacactactccatccagattatggatgccacc
aagtcccacactcgcacattcgacctctccggacaagcatataccgatgcctatgaggag
tacctgagactcaaggctgcagccttcgctgagaagaaccgtggtagagtggttggtggt
ctgccggatgtggtcaccattatggagcagaagaccctgagcctgacctgcacagtctgg
ggtgaccccagtccagaggtcacctggttcaagaatgaaaatgaggtagtctccactgag
cacgccaagataacgcttgaggccaataagttcgccagcctcaccatcaccgccgtcacg
ccggaggactccggcaagtacagcatcaacgtacggaacaaatatggcggggagttcgtg
gagatcaccgtgagcgtctacaagcacggcgagagcccccccgagcccaaaatgggaggg
agaggagcaacacctgcacccctggcctccaagacccctgcccaaacccctacccctgcc
caaacccccatcccccagacccccaccccatcccttaagtcccccaccccttccctaagg
tcccccaccccaaccgccaaatccccaaccccctag
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