Oncorhynchus tshawytscha (Chinook salmon): 112245552
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Entry
112245552 CDS
T05605
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
112245552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112245552
04147 Exosome [BR:
otw04147
]
112245552
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
112245552
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112245552
Exosomal proteins of other body fluids (saliva and urine)
112245552
Exosomal proteins of colorectal cancer cells
112245552
Exosomal proteins of melanoma cells
112245552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC39
TPR_MLP1_2
AIF-1
Nuf2_DHR10-like
YabA
FKBP15
Motif
Other DBs
NCBI-GeneID:
112245552
NCBI-ProteinID:
XP_042168205
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MSFSRSSMSYSSSGGGGGGGTMSMRSGGGGGMGMGSSRFSSMGGGGGGGRVTAMRAGSVY
GGAGGSGVRISSSSFGSGGGGGGYGFGMGGGGGGGCGYGFSMGGGGGGMGGVGGGGGSYG
FGMGGGGGGGADINVSANEKATMQNLNDRLSTYLEKVRLLEAANAELELKICQFLESKTS
PSARDYSGFYATIADLQEKIQAATCLNGSIYLNIDNAKLAADDFRNKYENELAMRQSVEA
DIAGMKRMLDEMAMARSDLEMQIEGLKEELIYLKKNHEEELLAMRTQMTGQINVEVDAAP
QEDLSRVMAEIREQYEAGSAKNQRDLEAWFQTKTETLNQEVASSTEVLQTSKSEISDIRR
TLQGLEAELQSQLTMKGSLENTLAETEGRYSMQLGRLQNQVTSLEEQLVSLRSDMECQGQ
EYKMLLDIKTRLEMEIAEYRRLLDGEASGLGLSSSKSGHSSSSSHISSSSSGLNSGLSSS
GSVLSSSTKGNVVITEAEIVEGKVVSSSETKHAS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccagatctagcatgtcctacagcagcagtggcggtggaggcggaggtggc
accatgtccatgaggtctggaggtggaggtggaatgggtatgggctcctcccgcttctcc
tcgatgggtggtggtggtggaggaggccgtgtcactgccatgagggccggcagtgtgtat
ggaggtgcaggaggctctggggtgcgcatctctagctcctcgttcggttccggtggcgga
ggtggtggttatggtttcggaatgggagggggtggcggcggcggttgcggttatggtttc
agcatgggagggggtggtggcggcatgggaggggttggcggcggcggtggcagttatggt
ttcggcatgggtgggggtggtggtggtggagccgacattaatgtgtcggccaatgagaag
gccacaatgcagaacctgaacgaccgcctgtccacctacttggagaaggtgcgcttgttg
gaggcggccaacgccgagctggagctgaagatctgtcagttccttgagagcaagacgtcc
cccagcgctcgcgactactctggcttctatgctactatcgccgaccttcaggaaaagatc
caggctgccacctgcttgaacggaagcatctatctgaacattgacaacgcaaagctcgct
gcagacgacttcagaaacaagtatgagaacgagctggccatgcgtcagtcagtggaggcg
gacattgccgggatgaagaggatgctggatgagatggccatggccagatctgacctggag
atgcagatcgagggactgaaggaggagctcatctatctcaagaagaaccatgaggaggag
ctgctagccatgaggactcagatgactggacagatcaacgtggaggtggacgcagcacca
caggaggacctgtccagagtcatggctgagattcgcgagcagtacgaggccggtagtgcc
aagaaccagcgcgacctggaggcctggttccagaccaagacagagacgttgaaccaggag
gtggcgtccagcacagaggttctccagacctccaagtcagagatttcggacatccgtcgt
acactgcagggcctggaagccgaactgcagtcacagctcaccatgaaaggctccctggag
aacacgctggcggagacggagggccgttactccatgcagctgggtcgcctccagaaccaa
gtgaccagtctggaggagcagctagtctctctccgcagcgacatggaatgccagggccag
gagtacaagatgctgctggacatcaagacacgcctggagatggagattgctgagtacagg
aggctgctggacggagaggctagcggcctcggcctcagctcctcgaaatctggccacagc
tcctccagctcccacatcagctcttctagctccggcctcaactccggcctcagctcctca
ggctccgtcctcagctcctccaccaaaggcaatgtggtgatcaccgaagcggaaatagtg
gagggcaaggttgtctcctcaagtgaaaccaaacacgcttcttaa
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