KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112245614
Entry
112245614         CDS       T05605                                 
Name
(RefSeq) LOW QUALITY PROTEIN: regulatory-associated protein of mTOR-like
  KO
K07204  regulatory associated protein of mTOR
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136  Autophagy - other
otw04140  Autophagy - animal
otw04150  mTOR signaling pathway
otw04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    112245614
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    112245614
   04136 Autophagy - other
    112245614
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    112245614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112245614
Membrane trafficking [BR:otw04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    112245614
SSDB
Motif
Pfam: Raptor_N Beta-prop_EML_2 WD40_Prp19 HEAT WD40_CDC20-Fz WD40_WDHD1_1st WD40 HEAT_2 WDR55 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Cnd1 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_EML Beta-prop_WDR75_1st EIF3I WD40_RFWD3 WD40_2 WDR54 Beta-prop_SPT8 PEP5_VPS11_N PDS5
Other DBs
NCBI-GeneID: 112245614
NCBI-ProteinID: XP_042158541
LinkDB
Position
LG02:64609528..64793572
AA seq 1339 aa
MKMDSELLHSPAMCLAEEEEADTSDWNLPLAFMKKRHSEKIEGSKALAQSWRMKDRMKTV
SVALVLCLNVGVDPPDVVKTSPCARLECWIDPLSMSPQKALETIGANLQKQYENWQPRAR
YKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEIWVFNKNYTQYIPLS
VYDLQTWMGSPSIFVYDCSNAGIIVKSFKQFALQREQELEVAAINPNHPLAQMPLPPSMK
NCIQLAACEASELLPMNPDLPADLFTSCLTTPIKIALRWFCMQKSAKLVPGVTLDLIEKI
PGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFLLAERIMR
SYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTAFRHSPFFAEQLTAFQV
WLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWAVSLALSVGIFPYVLK
LLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLADPYMPAEHRTMAVFI
LAVIVNSYTTGQEACLQGNLIAICLEQLSDPHPLLRQWVAICLGRIWQNFDSARWCGVRD
SAHEKLYSLLSDPIPEVRCAAVFALGTFVGNSAERTDHSTTIDHNVAMMLAQLINDGSPV
VRKELVVALSHLVVQYESNFCTVALQFMEEEKNYPVPSPANTLEPCNLTPVRDSPAIPRL
RSVNSYTNIRAATTARNLNKSLQNLNLNEEGGPVTFSPGNLSTSSSASSTLGSPDNDEYI
LSFETIDKMRRVSSYSSLNSLIGVSFNSVYTQIWRVLLHLAADPFPEVSDLAMKVLNSIA
YKATMNARPQRILDSGSLTQSAPASPTSKGAHIHQAGGSPPCXSASSSSLTNEVPKPPTR
GGEQPPTRPPTXPTLGGQAPHSHQFPRTRKMFDKGPSGSEQAGDDADDPGGHKAYMNANL
STGLCDWSAKYFAQPVMKIPEEHDVESQVRKEREWRFLRNARVRKQSQRITQRGVTRLDD
QIFINRNPGVPSVVKFHPFNPCIAVADKDSICFWDWEKAERLDYFYNGNPRYTRITAMEY
LNGHDYSLLLTATDDGALRIWKNFADQRNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETG
LLMTSGDVRVIRIWDTEREMKVQDIPTGADSCVTCLSCDSQRSLIAAGLGDGSVRLYDRR
MGANECRVMTYREHSSWVVKAHLQKQTDGKIISVSVDGDVRFFELRSPDSVNVLQTVKGL
TALDIHPQANLFACGSMNQFIAVYNSNGDVISNIKYYDGFMGQRIGAISCLAFHPYWPHL
AVGSNDYYMSIYSAEKRLR
NT seq 4020 nt   +upstreamnt  +downstreamnt
atgaaaatggactcggaactgctgcactcgccggccatgtgtctggctgaggaggaggag
gcggacacgagcgactggaacctgccgctggccttcatgaagaaacgccactcagagaag
atcgagggctccaaggccctggcccagagctggaggatgaaggaccggatgaagacagtg
agtgtggccctggtgttgtgtctcaacgtgggggtggaccctcctgacgtggtcaagacg
tcaccctgtgctagactggagtgctggatcgaccctctgtccatgagtccacagaaagcc
ctggagaccatcggagccaacctgcagaagcagtacgagaactggcagccccgggcacgt
tacaagcagagtctggaccccaccgtagacgaggtgaagaagctgtgtacgtccttgaga
cgcaatgccaaggaggagcgtgtcctcttccactacaatggacacggggtcccccgaccc
accgtcaacggagagatctgggtcttcaacaagaactacacccagtacatccctctgtct
gtgtacgacctccagacgtggatgggcagcccctctatcttcgtttacgactgctccaac
gctggcatcatcgtcaagtctttcaaacagttcgccctgcagagagagcaggagttggag
gtggcagccattaaccccaaccaccccctggcccagatgcctctccccccctccatgaag
aactgtatccagctggctgcctgcgaggcctcggagctactgcccatgaaccctgacctc
cccgctgacctcttcacctcctgcctcaccacgcccatcaagattgccctgcgctggttt
tgcatgcagaaaagtgccaagctggtgccaggagtgacgttggacctcattgagaagata
cctgggagactgaatgacagacgcaccccactgggagagctcaactggatcttcactgct
atcactgacactatcgcctggaacgtgctgcccagagatctgttccagaagctctttcgt
caggacctgttggtggccagtttattccgcaacttcctgttggccgagaggataatgagg
tcatacaactgcacccctgtcagcagtccgcgcctgccacctacatacatgcacgccatg
tggcaggcatgggacctggctgtggacatctgtctctctcagctgcctaccatcattgag
gagggcaccgccttcaggcacagtccgttctttgcagagcagctgacagcgttccaggtg
tggctgaccatgggagtggagaacaggaacccccccgaacagctccccatcgtactgcag
gtcctcttgagtcaggttcacaggctgagagcgctggacctgctcggccgcttcctggac
ctgggaccctgggccgtcagtctggccctctccgtagggatcttcccctacgtgttgaag
ctgctacagagctctgcgcgggagctccgacccctgctggtcttcatctgggctaagatc
ctggctgtggacagctcatgtcaggcagacctggtaaaggacaacggacacaagtacttc
ctgtctgtcctggccgacccctacatgcctgctgagcaccgcaccatggctgtctttatc
ctggctgtgattgtcaacagctacaccacaggccaggaggcctgtctgcaggggaatctg
atagccatctgcctggagcagctctctgaccctcatcccctgctccgtcagtgggtggcc
atctgcctgggacgcatctggcagaactttgactcggcccgctggtgtggtgtcagggac
agtgcccacgagaagctctacagcctgctgtccgaccccatacctgaggtgcgctgtgcg
gcagtgtttgccctggggacgtttgtggggaactcggccgagcggacggaccattctacg
accatcgaccacaacgtggccatgatgctggcacagctcatcaacgacggcagccctgtg
gtccgcaaggagctggtggtggctctgagtcacctggtggttcagtacgagagtaacttc
tgcaccgtggccctgcagttcatggaggaggagaagaactaccctgtaccctcacctgcc
aacaccttagagccctgtaacctgactccagtgcgcgacagcccggccatcccgcggctg
cgttcagtcaactcctacaccaacatcagagctgccaccactgcacgcaacctcaacaag
agcctgcagaacctcaacctcaacgaagagggtggtccggtgacgttctcaccaggtaac
ctgagcaccagcagcagtgccagcagcacccttggtagccctgacaacgacgagtacatc
ctctcctttgagaccatcgacaagatgagacgagtctcctcctactcttccctcaactcc
ctcataggggtgtcgttcaacagcgtttacacacagatctggagggttctcctgcacctg
gcggccgacccgttcccagaggtgtccgacttggccatgaaggtcctcaacagcatcgcc
tacaaggccactatgaacgctcggccccagaggatcctggactctggctctctcacccag
tcggcccctgccagccccaccagcaagggggcacacatccaccaggcaggtggttctccc
ccatgcnccagtgccagcagctccagtctgactaacgaggtgcccaaacccccgacacgc
ggaggtgaacagcctcccacgcggccccctacancccccacgctgggcggacaagccccc
cactcccaccagttcccccgcacgcgcaagatgttcgacaaggggccctccggctctgaa
caggctggggatgatgcagatgacccaggaggtcacaaggcctacatgaatgctaacctg
tctacagggctgtgtgactggagcgccaagtactttgctcagcctgttatgaagatccca
gaagagcatgatgtggagagccaggtgaggaaagagagggagtggaggttcctgaggaac
gcccgcgttcgaaaacagagtcaacgtatcacgcagagaggcgtgacacgtctggacgac
cagatcttcatcaaccgtaaccctggcgttccctccgtggtcaagttccaccccttcaac
ccctgcatcgccgtggcagacaaagacagcatctgtttctgggactgggagaaggcagag
aggctggactatttctacaacgggaaccctcgctacacccgcatcacagctatggagtac
ctcaacggacatgactactccctgctgctcactgctacagatgacggggcgttgcgtatc
tggaagaactttgccgaccagcggaaccccgagatggtgacggcgtggcagggcctgtcc
gacatgctccccaccacccgaggtgcaggcatggtggtggactgggagcaggagacaggg
ctgctgatgacgtctggagacgtgagggtcatcaggatctgggacacggagagggagatg
aaggttcaggacatcccaacgggggcagacagctgtgtgacttgcctatcatgtgactca
cagcggtctctcatcgcagcggggctgggcgacggctcggtccgcctctatgacaggaga
atgggcgccaacgagtgtcgtgtgatgacatacagggaacactcgtcctgggtggtcaag
gcccacctgcagaagcagacggacggcaaaatcattagtgtcagtgtcgatggagacgtg
cggttcttcgagctgcggtcgccggactctgtgaacgtgctgcagacggtgaaggggtta
acggcgctggacatccatccacaggccaacctgttcgcctgtggatcgatgaaccagttc
atagccgtgtacaactccaacggtgacgtgatcagcaacatcaagtattatgatggtttc
atgggccaaaggataggggctatcagctgtttggccttccatccctactggccccacctg
gcggtgggcagcaacgactactacatgtccatctactcagcggagaagaggctcagataa

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