Oncorhynchus tshawytscha (Chinook salmon): 112245839
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Entry
112245839 CDS
T05605
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
otw03015
mRNA surveillance pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112245839
09122 Translation
03013 Nucleocytoplasmic transport
112245839
03015 mRNA surveillance pathway
112245839
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112245839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112245839
03041 Spliceosome [BR:
otw03041
]
112245839
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112245839
TREX complex
112245839
Spliceosome [BR:
otw03041
]
Complex C
Other components
EJC/TREX
112245839
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112245839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112245839
NCBI-ProteinID:
XP_024269781
LinkDB
All DBs
Position
LG32:9780516..9783371
Genome browser
AA seq
272 aa
AA seq
DB search
MADKMDMSLDDIIQQSKKGGGGRGNRGGRSRGSTGRGGSGGRPGGAVSGGRTGGSGPMRS
RQNFSGDRSDSRPTPYSRPRELPDKWQHDMFEGGFGGNAGGGGGAGGAGVETGGKLLVSN
LDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSQGTADVHFERRADALKAMKQYNNVPLD
GRAMSIQHVTSQIRDDNQRLPSQSSNGGGGGFNRDRIGRPNFSERRGGGDRRGGRGSRGR
GRGGRGGGKPQQLSAEELDAQLDAYNAKMETS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatggatatgtctttggatgacattattcaacaaagtaagaaaggtgga
ggtggccgcggaaatcgaggaggccgcagccgaggatcaacgggtcgaggtgggagtgga
gggcgacccggtggcgctgtctccggaggccggacaggcggatccgggcccatgaggagt
cgacagaacttcagcggagacagaagcgacagcagacccacgccatacagcaggcccaga
gagcttccggacaaatggcaacacgacatgttcgaaggtggctttggcggtaatgctggt
ggtggcgggggagcaggcggtgctggtgtagagactggcggcaagctccttgtctcaaac
cttgacttcggtgtctctgacgctgatatccaggagttgtttgcggaatttggtacattg
aagaaagcggctgtgcactatgaccggtctggtcgcagccagggaactgctgacgtccac
tttgagaggagggctgatgcactcaaagccatgaaacagtacaacaatgtaccactcgat
ggccgcgccatgagcattcagcacgtcacatcacaaatcagagacgataaccagagacta
ccttcacagagttcaaacggaggcggtggtggattcaacagagaccgaatcggacgcccc
aatttctcagaaaggcggggaggcggagacaggcggggaggcagaggctccaggggcagg
ggtagaggcggacgtggtggaggcaaaccgcagcagttgtctgctgaagagctggatgcc
cagttggatgcttacaatgccaagatggagacaagttag
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