Oncorhynchus tshawytscha (Chinook salmon): 112245884
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Entry
112245884 CDS
T05605
Name
(RefSeq) neural cell adhesion molecule 1-like
KO
K06491
neural cell adhesion molecule
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03265
Virion - Ebolavirus and Lyssavirus
otw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus and Lyssavirus
112245884
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112245884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112245884
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112245884
04090 CD molecules [BR:
otw04090
]
112245884
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112245884
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
112245884
Membrane trafficking [BR:
otw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
112245884
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
NCAM1/2
112245884
CD molecules [BR:
otw04090
]
Proteins
112245884
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
112245884
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
otw00537
]
Others
112245884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
C2-set_2
Ig_4
Ig_6
C1-set
V-set_CD47
VEGFR-1-like_Ig-like
GARS_A
Motif
Other DBs
NCBI-GeneID:
112245884
NCBI-ProteinID:
XP_024269823
LinkDB
All DBs
Position
LG23:complement(20775563..20789158)
Genome browser
AA seq
685 aa
AA seq
DB search
MAESMLILRMCSIILVLGFSEAKMEIITSKPDVLLGENAMLLCKAGGEGDITWQKDGEDA
EDDQVEKVDETSSKLFIRNAKIEDAGRYTCLCEFDTGHRDYVSYAIFVYEPPSFGQTPTN
HEFLEGQDVVITCVVTGKPAVEVNWERDHQKLHSDAGRITRLKDNSLQINNISRKDRGSY
TCEAKIKDRPIFKKHVISIFVNVPPTVKIHEEVKKVMAGPETNVSLSCLVEGVPQPNIIW
TIPDSSDESRYKYNSDKSELIISSVVRSDYGEYICTAKNKIAESSAMIMLDVSEHPVAVL
SQEKMKVEPGQTLSVSCNVSGHPMPALQWVRKTNNDHLLTVSSCLVVFVWIQDTGGGRVR
MEDGYVLVVDNVTSSDGGLYSCMAISPAGNASTDFSLQTWPGKASQVSGTPGPTSVHFTL
GASLVDGGSPITHFTLQWKTGRENNWQERVIQSTDPLVITDLIPYTSYSVRFAPRNHLGQ
GGFSDELTVRTQGIRGEVLTRVVKLKREPDSPILVASEGRFEGNMFSIPLTQLDCGGSPI
IHYIVRYRVNKMDEDWRVKDLPSNSTVINLHDLQCKSDYHMEVLAVNSYGSSSPAKLNFN
VPQPVAKMNKGGMAKGAVASIVMLIFLVLLIAVDATCCYTNRCGMLMFLAVKLFGQKVPG
MKTVEEGDGTCNGKTSPIGDPATEV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtcgatgctcatcttgagaatgtgttccataatattggtccttggtttttca
gaggccaaaatggaaatcatcaccagcaaaccagatgtgttgctgggtgagaatgccatg
ctcctctgcaaagctggtggggaaggagacatcacctggcagaaagatggagaggatgct
gaagatgaccaggttgagaaagtggatgaaacatcgtcaaaactgttcatcaggaatgcc
aagatagaggatgcaggacggtacacatgcctctgtgaatttgacacaggccacagagat
tatgtatcttatgccatctttgtctacgagccgccatcctttgggcaaacaccgaccaac
catgagttcctggagggtcaagatgtggtcatcacctgcgtggtcactggcaagccggcg
gtggaagtcaactgggagagggaccatcagaaactgcactctgacgcaggtcggatcaca
agattgaaagacaactccctacagatcaacaacatcagcaggaaggatcgcggatcatat
acctgtgaggctaaaatcaaggaccggcccattttcaaaaagcacgtcatctccatcttc
gtcaacgttcctcccacagtgaagatccatgaggaggtgaagaaagtcatggccggacca
gagaccaatgtctccctcagctgcctagtcgagggagtcccccaaccgaacatcatctgg
acaatcccagactcttcagatgagtcccgctacaagtacaactcggacaagagcgagctc
attatctcgtccgttgtcaggagcgactacggagagtacatctgcacggccaagaataag
atcgcagagagcagtgccatgatcatgctggatgtctcagagcatcctgtagcagtgctg
agccaggagaagatgaaggtggagccaggccagactctctcggtgtcctgtaacgtctca
ggacaccctatgcccgcgctgcagtgggtcaggaagaccaacaatgaccacctgctaaca
gtgagttcctgtctggttgtgtttgtgtggatacaggacactggtggaggtcgagtgaga
atggaggatggctatgtcctggtcgttgacaatgtgacgtcctcagatggagggctgtac
agctgtatggctatcagtcctgctggcaacgcctccacagacttcagcctgcagacttgg
ccaggcaaagcatcccaggtaagtggcaccccagggcccacatcggtccacttcaccctg
ggggcttccctggtggacgggggctctcccatcacccacttcaccctccagtggaagaca
ggacgtgagaacaattggcaggagagagtcatccagtccacagaccccctggttatcaca
gatctgattccctacacctcctactctgtccggtttgcccctcggaaccacctgggtcag
ggtggcttctcagacgagctcacagtccgcacacagggcatacgaggtgaagtactgaca
cgtgttgtgaaactgaaaagggaaccagacagcccgatcctggtggccagcgaggggagg
tttgagggcaatatgttctcaatccctttaacacagttggactgcggaggctcccccatt
atccactacattgtccgttacagagtgaataagatggatgaggactggagggtgaaggac
ctgccatccaactcgacagtgatcaacctccatgacctgcagtgtaaatcagactaccac
atggaggtgctagccgtcaactcctacggctcctccagcccagccaagctgaacttcaat
gtcccacaacctgtagccaagatgaataagggtgggatggcgaaaggggctgtggcaagc
attgtcatgctcatctttttggtgctactgattgctgtggacgccacctgttgctatacc
aaccgctgcggcatgctgatgttcctggctgtcaagctgtttgggcagaaggtccctggg
atgaagactgtggaggagggtgacggcacctgtaatgggaaaacgtcccccattggagat
cctgccacagaggtctga
DBGET
integrated database retrieval system
