Oncorhynchus tshawytscha (Chinook salmon): 112245910
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Entry
112245910 CDS
T05605
Name
(RefSeq) rabphilin-3A
KO
K19938
rabphilin-3A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112245910
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112245910
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
FYVE_2
PI3K_C2
FYVE_CARP1-2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
112245910
NCBI-ProteinID:
XP_024269865
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All DBs
Position
LG04:complement(29915664..29962069)
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AA seq
625 aa
AA seq
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MTNAVMGGSSDRWVPNDRQMSMHANDKEQGNWTNQARPGPDAPDLTDEEKEIINGVIARA
EKMEAMEQERIGRLVNRLDDMKKTVCGDGVNRCLLCGEQLGVPGVSSVVCEDCKKHMCTK
CGVQNGSRSRSVWLCKICSEQREVWKRSGAWFFKGFPKQFLPSPMPISKPKESSAQRAPE
PASSDPRAAAGHPQSQARAGPEELGHAGKPPVAPKPSDVRMATGGTGHGYNEGGAQNSPV
ALQKAVPVQSSRPPPAASAQQAPLETEGGGYSTSGAPVEERVPPAVREERRQPTTYNPVP
ARQQAPPPEEEDANSYDSDEATTLGGLEFSLLYEQENNSLHCSILKAKGLKPMDSNGLAD
PYVKLHLLPGASKSNKLRTKTLRNTRNPAWNETLVYHGLTDEDMQRKTLRISVCDEDKFG
HNEFIGETRIALKKLKINQKKNFNVCLERVVPTKKTATAGGARGISLYEDEGGKEVGDVE
ERGRILISLTYSTQQNRLLVGVVRCVHLAAMDANGYSDPFVEICLRPDMGKKAKNKTNIK
KKTLNPEYNEEFSYDIKHSDLAKKTLDISVWDYDIGKSNDYIGGCQLGITAKGERLKHWY
ECLKNKDKKIERWHTLLNENPVNSN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcagtgatgggcggtagctcggaccgctgggtgcccaacgataggcagatg
agcatgcatgccaatgataaggaacagggcaactggaccaaccaggccaggccaggtccc
gacgctccggacctgactgacgaggagaaggagatcattaacggtgtgatcgcccgtgct
gagaagatggaggccatggagcaggagagaattgggcgcctggtgaaccgtctagatgac
atgaagaagacggtgtgtggggacggggtgaaccgctgtctgctgtgtggggagcagctg
ggtgttccaggggtcagctcagtggtttgtgaggactgcaaaaagcacatgtgcaccaag
tgtggagtgcagaacggcagccggtcgcgctctgtgtggctctgcaagatctgcagcgaa
cagcgagaggtgtggaagcgatctggtgcctggttctttaaaggctttcctaagcagttc
ctgccctcgcccatgcccatctccaagcccaaagagtcaagtgcccagcgagccccagag
ccagcatcatctgaccccagggctgcagctggtcatccccaatcacaggccagagcagga
ccagaggaactggggcatgctggcaaaccacctgtggcccctaagccgtcagatgttcgc
atggccactggtgggactggtcatggttacaatgagggaggtgctcagaacagcccagtg
gcgctgcagaaggctgttccagtccagagctccaggccccctccagcagcatcggcccag
caggctccactggagacggagggaggtggctactccactagcggtgctccagtggaggaa
agagtgcctcctgcagtgcgggaggagaggagacagccaaccacctacaaccccgttcct
gctcgacaacaagcccctccgcctgaggaggaggatgcaaacagctatgactcagatgag
gccaccactctgggcggcttggagttcagcttgctttatgagcaggagaacaacagtctc
cactgcagcatcctcaaagccaagggactgaagcccatggactcgaacggactggctgat
ccctatgtcaagctgcatctattgccaggggccagtaagtccaacaagctacgcaccaag
accctgagaaacacccgtaaccctgcctggaacgagaccctggtctaccacggactcaca
gacgaggacatgcagcgcaagactctcaggatctctgtctgtgatgaggacaagtttggg
cataatgagtttatcggagaaactcgcattgcgctgaagaaactgaagatcaaccagaaa
aaaaacttcaacgtgtgtctcgagagagttgtccctacaaagaagactgcaacagctgga
ggggctcgaggcatttcgctctacgaggatgagggtgggaaggaggttggagatgtggag
gagcgtggtcgtatcttgatctccctcacgtacagcacccagcagaatcgtctcctcgtg
ggtgtggtgcgctgtgttcacctggccgccatggatgccaatggatactctgacccattt
gtcgaaatatgcctgagacctgatatggggaagaaggccaagaacaaaacaaatatcaag
aagaagaccctaaacccagagtacaacgaggaatttagctatgacatcaagcacagcgac
ctggctaagaagaccctggacatctcagtgtgggactacgacattgggaaatccaacgat
tacatcggtgggtgccagctgggcatcacagccaaaggggagcggctgaagcactggtat
gagtgcctgaagaacaaggacaagaagatagagcgctggcacaccctgttgaatgagaat
cctgtcaacagcaactaa
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