Oncorhynchus tshawytscha (Chinook salmon): 112246003
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Entry
112246003 CDS
T05605
Name
(RefSeq) sorting nexin-8
KO
K17922
sorting nexin-8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112246003
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112246003
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
Others
112246003
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112246003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Snx8_BAR_dom
DUF6687
Motif
Other DBs
NCBI-GeneID:
112246003
NCBI-ProteinID:
XP_024270032
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All DBs
Position
LG27:9939941..9954131
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AA seq
520 aa
AA seq
DB search
TVAGELNEGSVPPYYREVYEAIRSKIEERVQVEVFQRLLSRTDLPSAVQGQIAEHVDYTD
GFLSKLSLYKALVLIALAQQGKQPSPKLLENCIQEFPKPQLGEFKVLQTLRMQPTQESPL
TVPQTLGKLLARETVQVELIPEKKGLFLKHVEYQITSQHFKISVYRRYTDFDVFHELLLQ
RFAYRMVPALPPKRMLKGVLTSMSERDFIEGRRRALGRFINLVARHPFFSEDELVKTFLT
FNGSDVQVKMRDACKKMGDEFMTNTMATLAKDYLPADIQAQFSSSRELIRNIHNSFHKLR
DRAEKMAERSKENATDLLMFGRELSTLGSDGSPIPSLASSKSTWGILRQSLKGLSVEFAL
LADKGAQQGRREEDDVVEKLNLFLDLLQSYRDLCERHEKGVLHEHQRALQKYGMMKRQMM
SATVQPKEQVSVEQLESRIVQQENAIQTMELRNYFSLFCLHQETQLIFTYLPITSHILGA
FVNSQVQGHQEMGAVWNDLQQKLGCLFGVDEMQSPPLTPK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
actgtggcaggcgagctcaatgaaggatcagtgcctccatactacagggaggtgtatgag
gccatccggagtaagatagaggaacgagtgcaggtggaggtcttccagaggttgctcagc
agaacagatctccccagtgctgtgcagggccagattgctgagcatgttgactacactgat
ggattcttaagcaagttgtccctatataaagcactggtgttgatcgcgcttgctcagcaa
ggaaagcaaccaagcccgaaactcttagagaactgcatacaagagttccctaagccccaa
cttggcgagttcaaggtcctccagactctgaggatgcagccaactcaggagagccccctc
acggtgccccagaccctgggcaagctgcttgccagggagacagtccaggtggagctaatt
cctgaaaagaagggtctgttcctcaaacacgtggagtaccagatcactagccagcatttt
aagatctctgtttaccggcggtacactgatttcgatgtcttccacgagctattgctgcag
aggtttgcctacagaatggtgcctgcactgccgcctaagagaatgctgaaaggagtcctg
acctccatgtctgagagggactttatagagggaaggcggcgtgctctgggccggttcatc
aacttagtggcacgacaccccttcttctctgaggacgaactggtcaagacctttctcacc
ttcaacggctcggatgttcaagtgaaaatgcgtgatgcttgcaagaaaatgggagatgaa
ttcatgactaatacaatggcaactctggcaaaggattatctcccagctgatatccaggcc
cagttttcatcaagcagagaactgatcaggaatatccacaacagctttcacaagctgcgg
gaccgggcagaaaagatggcagagcgctccaaggaaaacgccactgatttgctaatgttt
ggaagggagctcagtacactgggctcagatggttcacccattccctctctggcttcatcc
aaaagcacctggggcattctccgtcagtctctgaaaggcctttccgtggagtttgctctg
ctagccgacaaaggtgctcagcaggggaggagagaagaggacgatgttgtggaaaaactg
aatctattcttggatttgctgcaatcatacagagatctgtgtgagcggcatgagaaagga
gtattgcacgagcaccagagagcgctgcagaagtacggtatgatgaagaggcagatgatg
agtgccacagtgcagcccaaagagcaggtgtcagtggagcaactggagtctcgcattgtg
cagcaggagaacgccattcagaccatggaactgcggaactacttctccctgttctgcctt
caccaagagactcagctcatcttcacatacctgcccatcacctctcacatcctgggagcc
ttcgtcaactcacaggtccaaggtcaccaagagatgggtgccgtgtggaatgatctccag
cagaagcttgggtgtctcttcggtgtcgatgaaatgcaatcccctcctcttacacccaag
tag
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