Oncorhynchus tshawytscha (Chinook salmon): 112246015
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Entry
112246015 CDS
T05605
Name
(RefSeq) DENN domain-containing protein 3
KO
K20162
DENN domain-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112246015
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112246015
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
WD40
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
112246015
NCBI-ProteinID:
XP_042150964
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All DBs
Position
LG13:complement(12390773..12439579)
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AA seq
1210 aa
AA seq
DB search
LHQDPEEALLHQEEEGRPGTANGEAAKGSDGWGGTTEDISVPKDLDLIALPQLCFPGGLQ
IASEQREDSYHYLVFTDVFGNRTHAVVVQYYRPIQFSQDGGHQNGYRLSSKSSRLYTAYG
ICVISKYPYYNALRDCLSCLLSQLKPSWMGDFEERVKEFSAKLALVPIPPPGQLHVVFSL
RPLQIGLPSREDKDRPAVDLDLHLPFLCFRPRQLLQIITSLLTEQRVVMFSCDWARLTLL
AESLMFFIHPLVWQHPFVPVLSSQMLDFLMAPTAYLMGCHLHHYEEVAAVTDDLILVNID
DGIVSSSSSDGVDLPDVPLAARECFLTRAEGLQMHYDLDVCHLGSSTDVNDQRAQRRQWQ
RKLNTHIQNITLELIVNIFREVHHHLNYEHRVFNSEEFFRSREPADQPFFKKVLDTHIFH
SFLRDRLNRKMDAFTRMELSTRTETYRLKSMTESPRRPTMQEMARKYTSPESRLSKRLGA
SLPNLGDGVGALVGPLMQNSLKKIQVDSGLKSPQKPVRCFKLPEFPPPLAYHYVQNYYQE
MITLLDKAISGVAFEDSSLLACYHYLRGFVNTVAGKRLDALEDFQNLYKTDTDIFPGELV
NALVDSLQDGERAQANRRTEIKRLISRVKKDHERERTCHDDEAVKRFQLPKKHMQLEDFV
RHVQESGIVKDQGTIHRLFEALTVGQQKQVDPDLFRVFYTFWKETEAEAQEVALPASVLE
HLEANECVFKLSSSVKTSHGVGKIAMTQRRLFLLTVGRPGYVEITKFRDIEEVKISSAPF
LLLRIPSLKIKTTLRKETFEVNLKSEVDLWHLMVKEMWAGRKMADDHKDPQYMQQALTNA
LLMDAVVGCLQSQKAIFAATKLAHFDRMKLEVPMMVPKTTSETLKHKINPSLDRTSPQAV
DVLLYTPGQLGVSFDTEGDGNPKLWCALSDGKVVVFDAASWSMQQSQLQVGSSRVNCMLG
VDRQQVWIGSQDSVIYIISTRSMSCNKQLTDHRSEVTGLALGERSEKYSTSCCSPKVAYS
CSAEGTVMTWDVSTLQVRKQFRLSCDRLQSVQLCSGTLWCCARDCIMEVWKNGTLTRKIS
LPEQLRGSPTAFSSFLLYQEKEQLWTACIDVGELCVWHLAELTKPFQRIQLPDCAGVTCL
IKVKNQIWVGGRSSGKSRGKIYVVDTQRHTVEKELVAHTDCVQALCSAEDRYVLSGAARE
DGKIAIWKVE
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
cttcaccaggatccagaggaggcgctccttcatcaagaagaagaggggaggcctggtacg
gctaatggagaagcagccaagggtagcgatggatggggtggcaccacagaggacatcagt
gtccccaaggacctggacctcatcgccctgcctcagctctgcttcccagggggtcttcag
atagccagtgagcagagagaagactcgtaccattacctggtgtttactgatgtcttcggg
aacaggacacatgctgtagtggtgcagtactacaggcctatacagttctctcaggatggt
gggcaccaaaatggctaccggttgtcctccaagtcgtcccgtctctacacggcgtacggc
atctgtgtcatctctaaatacccttactacaacgctctcagggactgcctgtcatgtctc
ttgtcccagctcaagcccagctggatgggggactttgaggagagggtgaaggagttttca
gccaagctggcgctggtgcccatacctccacctggacaactgcatgtggtgtttagtctg
aggcctctccagattgggcttccctcccgggaggataaggaccggccagctgttgacctc
gacctccatctgcctttcctgtgctttagaccccgacagctcctccaaatcattaccagc
ctgctgacagagcagagggtagtaatgttttcctgtgactgggcccggctcaccctgctg
gcagagagcctgatgttcttcatccaccccctggtgtggcagcaccccttcgtccccgtc
ctctcaagccagatgctggacttcctcatggcgcccaccgcctacctcatgggctgtcat
ctgcaccattatgaagaggtggccgcggtaactgatgatctgattctggttaacattgat
gatggcatcgtgtcgtcttcctcgtccgacggggttgacctgccggacgtcccgctggcg
gccagagagtgttttctaacacgggcggagggtctccagatgcactatgacctggacgtg
tgtcacctggggtccagtacagacgtcaatgaccagagggcccagaggaggcagtggcag
aggaaacttaacacacacatccagaacatcactctggaactcatcgtcaacatcttcaga
gaagtccaccatcacctcaactatgagcacagagtcttcaacagtgaagagttcttcagg
tctagagaaccagcagaccagccatttttcaagaaggtgttggacacacacatcttccac
tcgttcctacgggatcgtctgaacaggaagatggacgcgttcacacgcatggagctgagc
actcggacagaaacgtacaggctgaagtccatgacggagtctccgcggcggcccaccatg
caggagatggcccgtaaatacaccagcccagagagccggctcagcaagaggctgggggcc
agtctgcccaacctgggggatggtgtgggcgccctggtgggacccctcatgcagaactcc
ctcaagaagatacaggtggacagcggtctgaagtctccccagaagccagtgagatgcttc
aagcttcctgagttccctccaccgctggcctaccactacgtccagaattactaccaggag
atgatcaccctcctggacaaggccatcagcggggtggccttcgaggactcctctctcctg
gcctgctatcactacctccggggctttgtcaacacagtggccggtaaacgtctggacgca
ctggaagactttcagaacctttacaagacggacacggacatcttccctggcgagctggtt
aacgccctggtggactctctacaggatggggaacgggcacaagctaaccgccgaaccgag
atcaaacgcctgattagtcgggtgaagaaggaccacgagagggagcggacgtgccatgac
gatgaagctgtcaagcggttccagctgccgaaaaagcacatgcagttggaggactttgtg
aggcacgtgcaggagtctgggattgttaaggaccaggggaccattcaccggctgtttgag
gctctcactgtgggccagcaaaaacaggtggacccagatctcttccgagtgttctacacc
ttctggaaggagacagaggccgaggctcaggaagtggccctgccggcctcagtcctggag
cacctggaggctaacgagtgtgtcttcaagctgtcctcttcggtcaagaccagccacggc
gtgggcaagatcgccatgacccagagacggctgttcctgctgaccgtaggacgacccggg
tacgtggagatcaccaagttcagagacattgaggaggtgaagatctcctcggctcccttc
ctgctgctgaggatcccctctctgaagatcaagaccaccctgaggaaagagacatttgag
gtcaacctgaagtcggaggttgacctctggcacctcatggttaaggagatgtgggccgga
cggaagatggccgacgaccacaaggacccccagtatatgcagcaggctctgaccaacgcc
ctgttgatggatgcagtggttggctgtctacagtcacaaaaggccatttttgcagcaacc
aagttagcacactttgacagaatgaaactggaagtgccaatgatggttcccaaaaccacg
tcagagaccctgaaacacaagatcaacccgtctctggaccggactagcccccaggcggta
gatgttctgctctacaccccaggccagctgggcgtatcgttcgacaccgagggtgatggg
aaccccaaactgtggtgtgccctgagcgacggcaaggtggtggtgtttgatgcagccagc
tggtccatgcaacaaagccaacttcaagtaggctcttcacgagtgaactgcatgctggga
gtagaccggcagcaggtgtggattggctctcaggattccgtcatttacataatcagcacc
cgcagcatgtcctgtaacaagcagctgacggaccaccgcagtgaggtcacagggttggcc
ctaggggagcgcagcgagaaatacagtacttcctgttgcagccccaaggtggcgtactcc
tgcagtgcggaaggtacagtgatgacgtgggacgtgtccacactgcaggtgaggaaacag
ttcaggctctcctgtgaccgtctccagtccgttcagctctgcagtggaaccctgtggtgc
tgtgccagagactgcattatggaggtgtggaaaaatggaacgttgactcgcaagatctcc
cttcctgaacagctccgtggctcccccactgcctttagcagcttcctgctctaccaggag
aaggagcagctgtggacggcctgtatagacgtaggggagctgtgtgtgtggcacctcgcg
gagctcaccaagcccttccagaggatccagttgcccgactgtgcaggtgtcacctgcctc
atcaaggtcaaaaaccagatctgggttggcggccgtagctcggggaagtccagggggaag
atctacgtagtggatacccagcgacacacggtggagaaggagctggtagctcacacagac
tgtgtccaggcactgtgctccgcagaggaccgctatgtgctgagtggggcggcccgcgag
gatgggaagatagccatctggaaagtggagtaa
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