Oncorhynchus tshawytscha (Chinook salmon): 112246026
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Entry
112246026 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: myoferlin
KO
K22125
myoferlin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112246026
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Others
Ferlins
112246026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Pex24p
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
112246026
NCBI-ProteinID:
XP_042183389
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All DBs
Position
LG09:76362861..76414875
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AA seq
2052 aa
AA seq
DB search
MLRVVVESAKGIPKKKLRNPDPIAAVVFKGEKKKTKAIDRELNPVWNEVLEFDLKGSPLD
ASSFIDVIVKDYETIGKDIFIGSAKISLLDLAHGHTKSLPAKNLSLVNEKKQDTGATIHL
MIGYEPPASTAPNPNNQTDEDQSYGDTGGGEEGKDGEEVSLGGQVGTPGVPPTPGQPGNP
NQRPVRTSRKRHRALANKPQDFQIRVRVIEGRQLPGNNIKPVVKVNVCGQTHRTRIRRGN
NPFFDEIFFFNVNILPSELLDDCISIGVYDSYSLRADSLXGEFKLDVGYIYDEPAHAIMR
KWLLLSDPGDSSSGAKGYLKVSLVIVGTGDEPPTEKRERNEEQDDIESNLLVPAGVTLRL
VTLNLKVYRAEDMPQMDDAFVQTVKQVFGGEGDNKNLVDPFLEVSFAGKKLCTKIIEKNA
NPEWNQLINLQVKFPSMCESIKLTVFDWDRLTRNDVIGTTFLNLTKIASSGGEIEDTPAE
NCTNLSSEVSSGEAEVGFLPAFGPCYLNLYGSPREFTGLPDPYEELNFGKGEGVAYRGRV
LIELSTQLDGKADSKLDNISSDDILMAQKYQRRRKFSLCAVFHSSCMLQEPGEPIQFEVS
IGNYGNKLDSTCMPLASTTQYSCAVFDGNHYYYLPWADTKPVVILTSFWEDISHRLDSVN
IILYIADRLESNLTSLRTAILAKASEARLAEIWLKLINHMIEDLSNFQVPELEGRPNLTS
LDVQIKKLRDSAVASIREMAKRLKEEATDVIATLTDIEEWLERLKQLAEEPQNSMPDVVI
WMLRGERRVAYARLPANQILYSTYSEQACGKYCGRTQTIFMQYPMDKNKGVKIPVQLRVN
MWLGLSAHEKKFNSFSEGTFSVFAEMYENQAQVFGKWGTTGLVCRHKFSDVTGKVKLKQE
RFMPPRAWEWEGEWFVDPERGLLTEADAGHTEFTDEVYQNETRFIGGEWKAAADPFTDVN
GQKSQSPGEIECPAGWKWEDDWSFDSNRAVDEKGWEYGVTIPPDDKPKSWGAAEKMYHIH
RRKRLLRPRRKIADTKAAPERRDPGEGWEYSSLIGWKFHRKERLSDTFRRRRWRRKMAPS
DGIGASAIFRLEGALGVDVDEKASKKDAARLFGANTPNVSCKFDRSYMYHLRVYVYQARN
LIAMDRDSFSDPYAHVSFLHVSKTTEVIRATLNPTWDQTLIFNDIEIYGDPQTIAHNPPN
VVLELYDSDQVGKDEAMGRCTCPPVVKLNLGMVVSPKLLWFPVTKKGRNAGEMLVAAELL
LKDKANESDLPLVPPRRGATLYMVPQGIRPVVQLTAIEILAWGLRNMKTYQLATVTSPSL
MVECGGEVVQTAIIKNIKKNPNFPGSVLFFKVLLPKEEMYTPPIVLKVMDHRPFGRKPIV
GQCTLSLEEFRCDPYVTNAEVAMSSKVAMMAATQGDIIINMEDRPILNIELHKETEEEAV
DWWSKFYASVGEHEKCGPYLKKGYDTLKVYEGELEEVPDFRGLTDFCKTFRLQRGKTEDE
DDDPSVVGEFKGSFRVYPLSDDPEMPAPPRQFRELPESGLQECLVRIYVVRCMDLQPKDN
NGMCDPYIKISLGKKTKDDRDDYKPNTLNPEFGRMFELSCFLPQDKDLKIAVYDYDLLTR
DEKVGETVIDLENRLLSRFGAYCGLPQSYCISGTNQWRDQLKPSQILENLARLRGIPSPS
TSADGSTLSFGGRDYSLLDFEANRVIHQHLGPARERMALHVLSKQGLVPEHVETRTLYST
YQPTLSQGKIQMWVDIFPKSLGLLGPPCHITPRQAKKYVMRAIVWNTTDVILDETSITGE
NMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFVFGFDYLPTEQLCLVSRKEHFW
NLDQTEFRTPPKLIVQIWDNDKFSLDDYLGTVELDLLHLIPPAKTPEKCSLKMLQGVTGS
TPSKQPPPNSLFSQKSVRGWWPCMIEQDRKHILGGKVEMTLEIVEEREVEERPAGKGRDE
PNMNPKLDFPNRPDTSFFWFTSPCKTMKFIIWRRFKWIFIGLIVLLLVLLFLGILLYSLP
NYISMKIVKPFS
NT seq
6159 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtcgtagtggaatcagccaaaggcatccccaaaaagaaactcagaaaccca
gatcccatagcagcggtagtgttcaaaggtgaaaagaagaaaactaaagcaattgatcgt
gaactcaatcccgtgtggaatgaagtgcttgagttcgacctaaagggctccccattggat
gcgtcctcctttatagacgtgattgtgaaagactatgagacgatcggcaaagacatattt
attggctcagctaagatctctctcctagacctggctcatggtcacaccaagtccctccca
gcaaagaacctgtccctggtcaatgagaagaaacaggacactggggcaaccattcatttg
atgattggttatgagccgcctgctagcacagctcctaaccctaacaatcaaactgatgaa
gaccagtcgtatggggacacaggtgggggtgaggaagggaaggatggggaggaggtatcc
cttgggggtcaggtggggacccctggagttccacccacacctggccagcctggtaacccc
aaccagaggcctgtccggaccagccgcaagagacaccgggccctggccaacaagccccag
gacttccagattcgcgttcgagttatcgagggccgacagttgccgggaaacaacattaaa
ccggttgtcaaagtgaatgtgtgcggacagacccacagaaccaggatcagacgaggaaac
aaccccttctttgatgagatattcttctttaatgtcaacatcctgccttcagagctttta
gatgactgtatcagtattggggtctatgattcctactccctcagagcagacagtctanat
ggggagttcaagttggatgttgggtacatatatgacgaacctgcccacgccataatgagg
aagtggcttctcctgagtgaccctggtgactctagctcgggggccaaaggttacctgaag
gtcagcctggtcatcgtggggacaggagacgagccaccgactgagaagagagagcggaac
gaggagcaagatgacatagagagtaatctgttggtgccagctggggtaacactcagattg
gttaccctcaacctgaaggtgtaccgtgcagaggacatgcctcagatggatgatgcattt
gtacagactgtgaaacaagtatttggaggggaaggcgataataaaaacttagttgatcca
tttctggaggtcagcttcgctggcaagaagctgtgcaccaaaatcatcgagaaaaatgcc
aatcctgagtggaaccagctgatcaaccttcaggtcaagttcccatccatgtgtgaaagc
atcaagttgactgtatttgactgggatcgtctgaccaggaatgatgtgataggaaccaca
tttctaaatctgaccaaaatagcctcatctggtggtgagattgaagatacacctgcagaa
aattgcaccaatctgtcatctgaagtgagcagtggggaggcagaggtgggtttcctccca
gcgtttgggccttgctacctaaacctgtacggcagtcccagggagttcactggcctacca
gacccgtacgaggaactcaactttggcaagggtgaaggggtggcctacaggggcagagtc
ctcatcgagctctccactcaactggatggcaaagctgacagtaagctggacaacatctcc
agtgatgacatcctgatggcccagaagtaccagcggagaaggaagttctcgctgtgtgct
gtgttccacagctcctgcatgctccaggagcccggtgagccaatccagttcgaggtcagc
atcggtaactacggcaacaagctggactccacctgcatgccactggcatccacaacccaa
tacagctgtgctgtgtttgacggtaaccactactattacctgccctgggctgacaccaaa
cctgttgtcatcctcacatccttctgggaagacattagccaccgattggattcagtcaac
atcatcctctacatcgcagacagactggaatccaacctcacttctttgagaacagccatc
cttgccaaagcctcagaggcgcgcttggctgagatctggctcaaactcatcaaccacatg
attgaggatctgagcaactttcaggtaccagagcttgagggcaggcccaacctgacgtct
ctggacgtccagattaagaagctgcgtgattcggcggtggccagcatcagggagatggcc
aaacgcttgaaggaggaggccaccgacgttatagccactctgacagacatcgaggaatgg
ctggagagactgaaacagcttgcagaggagccccagaacagtatgcctgacgtggtgata
tggatgctgcgtggagagaggagggtggcgtacgcccgtctcccagccaatcagatcctc
tactccacctacagtgagcaggcctgtgggaaatactgtggcaggacacagaccatcttc
atgcagtaccccatggacaaaaacaaaggcgtgaagatccctgtccagctccgtgtcaac
atgtggctgggcctctctgcccacgagaagaagttcaacagcttctcagagggaaccttc
agtgtgttcgcagaaatgtatgagaaccaggcccaggtgtttgggaagtggggcaccaca
gggttggtgtgccggcataagttctctgacgtgactgggaaggtgaagctgaaacaggag
cgcttcatgccccccagggcgtgggagtgggaaggcgagtggttcgtcgacccagagaga
ggcctgctaacagaagcagacgcggggcacacagagttcacagacgaagtctaccagaac
gagacacgtttcattggcggggagtggaaggctgctgccgaccccttcacagacgtgaat
gggcagaagagccagagtccaggggagatagagtgtcctgctggctggaagtgggaggat
gactggagcttcgacagcaacagggctgtggatgagaaaggttgggagtatggcgtcacc
attccccccgatgacaagcccaagtcctggggagcagcagagaagatgtaccacatacac
cgcaggaagagactcttacggccacgcaggaaaatagcagacactaaagcagcacctgag
aggcgggatcccggcgaaggctgggaatactcgtccttgattggctggaagttccacagg
aaggagcgtttgtctgacacattccgccgtcgccgctggagacgcaagatggctccgtca
gacgggataggagcatcagccatcttcagactggagggggcgctgggggtagatgttgat
gagaaggccagtaagaaggatgctgccagactgtttggtgccaacacacccaacgtttcc
tgtaaatttgaccggtcgtatatgtaccatctgagggtgtatgtctatcaggccaggaat
ctcattgccatggacagggacagcttctcagatccctacgcccatgtgtccttcctccat
gtgagtaagaccacggaggtcatcagggccactctgaaccccacctgggaccagaccctc
atctttaatgacatcgagatctatggagacccccagaccattgcacacaacccacccaac
gtggtgctggagctctacgacagtgaccaggtgggtaaagacgaggccatgggtcgctgt
acgtgcccccctgtggtgaagctgaacctcggcatggtggtctcccccaaactgctgtgg
ttccccgtcaccaagaaaggccgcaacgcgggagagatgctggtggctgctgagctattg
ctgaaagacaaggccaatgagagtgacttgcccctggtgccccccagacgaggagcgacg
ctctacatggttcctcagggaatcaggcctgtcgtacagcttaccgccatcgagatctta
gcctggggtctgaggaacatgaagacctaccagttggccacagtcacctctcccagtctc
atggtggagtgtgggggggaggtcgtccagacggccatcatcaagaacatcaagaagaac
cccaacttccctgggtctgtcctcttctttaaagtgctcctacccaaagaggagatgtac
acccctcccatcgttctgaaggtgatggaccaccggccgttcggcaggaagcccattgtg
ggccagtgtaccctctccctggaggagttccgctgtgacccttacgtcaccaatgctgag
gtggccatgtcttccaaagtggccatgatggcagcaactcaaggagacatcatcattaac
atggaggataggcccatccttaatattgagctccacaaagagacggaggaggaggcagtt
gactggtggagtaagttctatgcctctgtgggagagcacgagaagtgtgggccgtacctc
aaaaaaggatacgacaccctaaaggtatatgaaggggagctggaggaggtcccagatttc
cgagggctgacagatttctgtaaaacgttccgactgcagcgggggaagactgaggatgag
gacgacgacccttcagtggtcggagagttcaagggctcgttccgggtgtaccccctatct
gatgacccagagatgccagccccgccacgccagttcagagagctgcctgagagcgggttg
caggagtgcctggtcaggatctatgtggtgcgatgcatggacctgcagcctaaggacaac
aacggcatgtgtgacccttacatcaagatctctttggggaagaaaacaaaagatgacagg
gatgactacaaaccaaacaccctcaatccagagtttggcaggatgtttgagctgtcctgt
ttcctccctcaagacaaagacctgaagatagctgtgtacgactatgacttgctcacccga
gatgagaaagtgggagagacggtcattgacctagagaacagactcctctctcgcttcggc
gcctactgcggactaccgcagtcctactgcatctcagggaccaaccagtggagggatcag
ctgaagccctcccagatcctggagaacctggccagactgagagggatcccttcacccagc
acctctgctgacggcagcactctctccttcggggggagagactacagcctgctggacttt
gaggccaacagagtcatccaccagcacctgggtccagccagggagaggatggccctgcat
gtcctcagtaaacagggtctggtgccagagcatgtggaaaccaggactctctacagtact
taccaacctacactgtcccagggaaagattcagatgtgggtggacatcttccccaagagc
ctgggtttactgggacctccatgccacattactccacgccaagccaagaagtacgtcatg
cgggctatcgtctggaacaccactgatgtcatactagatgagaccagcatcaccggagag
aatatgagtgacatttacgtcaaagggtggatgccaggtatggaggaggacaagcagaag
acagacgtccattacagatccctggatggtgatggcaacttcaactggcggtttgtcttt
ggcttcgactacctgcccacagagcaactttgcctcgtttccagaaaagagcatttttgg
aatctggaccaaaccgagtttcggacccccccaaagttgatcgtccagatttgggacaat
gacaaattctcactggatgactatctgggcacagttgagctggatctgcttcatctgatc
ccccctgccaagacccctgagaaatgcagtctgaaaatgttacaaggggttacaggctcc
acaccttccaaacaaccaccgcccaactctctgttctcccagaagtctgtgcggggctgg
tggccctgtatgatcgagcaggataggaagcacattctgggtgggaaagtggagatgacc
ctggaaatagtggaagagagggaggtagaagagaggcctgctgggaagggccgggacgaa
cccaacatgaaccccaaactggactttcccaatcgccccgacacttcctttttctggttc
accagtccatgcaagaccatgaagttcatcatatggcgcagattcaaatggatcttcatt
ggtttgatagtcctactgcttgtgctcttgttccttgggatcctgctgtactccctacca
aactacatctcaatgaaaattgtgaagcctttctcttag
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