Oncorhynchus tshawytscha (Chinook salmon): 112246228
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Entry
112246228 CDS
T05605
Name
(RefSeq) eukaryotic translation initiation factor 4B-like isoform X3
KO
K03258
translation initiation factor 4B
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
112246228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112246228
03012 Translation factors [BR:
otw03012
]
112246228
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112246228
mRNA cycle factors
Stress granule specific factors
112246228
Translation factors [BR:
otw03012
]
Eukaryotic type
Initiation factors
eIF-4
112246228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
112246228
NCBI-ProteinID:
XP_024270298
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All DBs
Position
LG07:60809232..60847543
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AA seq
664 aa
AA seq
DB search
MAAPAKKKGNKKGKTLTLTDFLAEDNGSGGNAPPPQPSYAKSTSWADETDDVEGDVSTSW
HSGEDSYRAPAIDRNILPTAPRSAREPNVDRSRLPRSPPYTAFLGNLPYDVSEESIMDFF
RGLAISAVRLPREPSNPERLKGFGYAEFDDVDSLLRALTLNEENLGNRRIRVDIADQSND
KEGRDNGQMGGRDRMGRMGDMGGPDKTDSDDWRARPTADADDGPPKREESAFGSRDRYGD
RDGPRRDNDRGFGGDRDRGFGGDRDRGFGGDRDRGFGGDRDSGRDRGFGGRDRYDDRGGE
SGAFGSRRDRDDGGRRAFGSGYRRDDDGGGGGRYGDRDRYGGDREDRYERREERGGEGGP
TQRPKLVLKPRSTPKEEEQARSGGGGAAPAAPATAPSSGRASIFGAAKPVDTAAKEREVE
EKLQRQLEEDKSRGFERKPRDRDRDPSWRSEEPLSERPATRSRTGSESSQTGSTSGGRVS
RRRESERSVENEVFSGKEDDPPSPGARPTSANSSTSSSKEPLKVMPAPPPKENAWAKRPA
VSAGSTPVSPSDAACPKLSSSSADERGSGRDENKVDGVRRDRGPPRGRGGAAGPGAGRGR
GEGANRDRRREEDRKDNRRDRDSRPAPEPKKYEESPTPKFSSASKYAALLMDSEQGDDAE
DSVE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccagctaagaagaaggggaataagaaggggaagaccctgaccctcactgac
ttcctggcagaggacaatgggagtggaggcaatgctccaccaccgcaacccagctacgcc
aagtccaccagctgggccgacgagacggatgacgtggagggagatgtgtccacctcctgg
cactcaggggaggacagttaccgggccccggccatagatcgcaacatcctgcccacggcg
ccacggtcagcccgcgagcccaacgtggaccggtcgcgcctcccccgcagccccccctac
accgccttcctgggcaacctgccctacgatgtctctgaggaatctatcatggacttcttc
cggggcctagcgatcagtgctgtgcgcttgccacgggagcccagtaacccagagaggctg
aagggctttggctacgccgagtttgatgatgtggactccctcctgagggcgctgactctc
aatgaggagaacctgggaaatcgcaggatccgggtggatattgcagatcagtccaacgac
aaggaggggagagataatggccagatgggaggacgggacaggatgggccgtatgggagac
atggggggccctgacaagacagacagtgacgactggagggcccggcccactgctgacgct
gatgacggacccccaaagagagaggaatccgctttcgggtcacgcgaccgctatggagac
cgtgacgggccgagacgggacaatgaccgcggatttggcggcgaccgggaccgcggattt
ggcggcgaccgggaccgcggatttggcggcgaccgggaccgcggatttggcggcgaccgg
gacagcggcagagaccgcggcttcggcggcagagaccgctatgacgaccggggaggtgag
agcggagcctttggctcccgcagggaccgggatgatggcgggcgacgtgcctttggcagt
ggctaccgccgtgatgatgacgggggtggtggtggccgctacggggatcgggatcgctac
ggcggggaccgagaggaccgatatgagaggcgcgaggagagaggtggtgagggtggtccc
acccagagacccaagctagtcctgaagccacgcagcacgcccaaggaggaggagcaggcc
cgcagtggtggtgggggagctgccccagctgctccagcgactgcccccagctccggccgt
gcctccatcttcggagcagccaagcccgtggacactgcagccaaggagcgggaggtggag
gagaaactccagaggcagctggaagaggacaagtccaggggctttgaaagaaaaccccgt
gacagagacagggacccaagttggaggagtgaggagccactttctgagcgacctgcaaca
cgctcccgcacaggaagtgagtcatcacagactggaagtacatctggaggaagagtctcg
cggcgcagagagagcgagcgatctgttgagaacgaagtattcagtggtaaggaggatgac
cctccctctcccggagctcgccctacttccgccaactcttccacatcttcctccaaggag
cccctcaaggtgatgcccgcaccaccacccaaggagaatgcctgggccaagcgccctgct
gtgagcgcagggtccacccctgtctcccccagtgacgcggcatgtcccaaactgagctca
agttctgcagatgaaagaggatctggaagggacgagaataaagtggacggtgtgcgtcgg
gaccggggccccccacgggggagagggggggctgcggggcctggagcagggcggggccga
ggagaaggggccaacagagatcgacgaagggaggaagacagaaaggataacagaagagat
cgggactcaagaccagcaccagagccaaagaaatacgaagagtccccaactcccaaattc
agctcagccagtaaatacgccgctttgctaatggacagcgagcaaggagacgacgcggag
gacagcgtagaataa
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