Oncorhynchus tshawytscha (Chinook salmon): 112246255
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Entry
112246255 CDS
T05605
Name
(RefSeq) vascular endothelial growth factor C isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112246255
04020 Calcium signaling pathway
112246255
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112246255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112246255
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Growth factors (RTK binding)
112246255
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
H_lectin
Motif
Other DBs
NCBI-GeneID:
112246255
NCBI-ProteinID:
XP_024270320
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Position
LG34:11992127..12050847
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AA seq
431 aa
AA seq
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MHLFGISVLLANSAILYANLASESSHEFSHDYYDYDQDQGDAPEPSEPDLEQQLRSVASV
EELMRIVYPNYYRVLSCRSKRGARFPLREEHTATETRSRSELPAYAGAPFNPDTLKSIES
EWKKTQCMPREVCLDVGKEFGAATNTFYKPPCVSVYRCGGCCNSEAHQCLNISTSYISKT
LFEITVSSSTNNNLVTISFANHTVCNCLSKLDAYRQVHSIIRRSLPECLVANKTCPKNHS
WSNRLCRCMAVQRDTPPPPQIQHSDSFEVDVCGSDKELDEETCQCVCRRQLRASGACGLH
RYLDKNTCQCVCKTLPSSCRPHQLFNKDTCQCVCKTLPSSCGPHQLFNKDTCQCSCARTC
PKHQPLNRTKCACECNESPNRCFLKGKRFHQATCSCYGPPCDVRRNRRCASGFYFSEEVC
RCVPTYWRRQD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatttggaatatctgttctccttgccaattcagcgattctctacgcaaatcta
gccagtgaatcgagtcatgaattcagtcatgactattatgattatgatcaggatcaaggg
gatgcaccggagccgtcggagccagaccttgagcagcagctgcgctccgtggccagtgtt
gaggaactgatgaggatagtgtaccctaactactacagagtgctcagttgccggtcgaag
cggggcgcacgcttccccctgagagaggaacacacagccacggaaacgcggtcgcgcagc
gaactgccggcgtacgctggtgctcccttcaaccctgacacactgaaaagtattgagtca
gagtggaaaaagacccagtgcatgccacgagaagtttgtttagatgtggggaaagagttt
ggggcggctacaaacaccttctataaaccaccctgcgtgtctgtctacagatgtgggggc
tgctgcaacagcgaggcgcatcagtgtttgaacatcagcacctcctacatcagcaagacg
ctgtttgaaatcacagtttccagcagtacaaataacaacctagtgactatcagctttgcc
aaccacaccgtgtgcaattgtctgtccaaactggacgcctacagacaagtacactccatc
atacgacgatctctaccagaatgtctggtagccaataaaacctgcccaaagaaccacagc
tggagcaaccgcttgtgcagatgtatggcggtgcaacgtgacacccctcccccgccccag
atacaacactcggactcgtttgaagtggatgtctgcgggtcagataaggagttggacgag
gagacgtgccagtgtgtttgcaggcgacagctccgggcctcgggcgcatgcggactccac
cgctacctggataagaacacgtgccagtgtgtgtgtaagacgctcccctcgtcctgtagg
ccgcaccagcttttcaataaagacacgtgccagtgtgtgtgtaagacgctcccctcgtcc
tgtgggccgcaccagcttttcaataaagacacgtgccagtgctcctgcgccaggacgtgc
cccaagcaccagccactcaaccgcaccaagtgtgcctgcgagtgcaacgagtcacccaac
aggtgcttcctgaaaggcaaaaggttccaccaggccacctgcagttgctacggaccacct
tgtgacgtgcggaggaatcggcgctgtgcatcaggtttttacttcagtgaggaggtctgc
cggtgcgtaccgacatactggagaagacaggattaa
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