Oncorhynchus tshawytscha (Chinook salmon): 112246278
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Entry
112246278 CDS
T05605
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112246278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112246278
03036 Chromosome and associated proteins [BR:
otw03036
]
112246278
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112246278
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112246278
PBAF complex
112246278
GBAF(ncBAF) complex
112246278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
112246278
NCBI-ProteinID:
XP_024270344
LinkDB
All DBs
Position
LG07:66804651..66829318
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AA seq
512 aa
AA seq
DB search
MAARGSFQSAPTGGGSGGGMGPGPQVQGGGPGMGPGTPGGRMGPSSGAQNHLYRSPMPGP
GYPRPGGMPPSSRMTPQGPPMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQVQQQRNQHT
KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLR
IFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLVIE
LDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRLAR
MLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRLHA
LLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLDNK
IHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVANPEEERRAEFYF
QPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggtagttttcaatcggctccaacgggaggaggtagtggcgggggaatg
ggacctggaccccaggtgcaaggtggaggaccaggcatgggacctggaactcctggtgga
aggatgggaccctcatcgggcgcacagaaccacctttaccgatctccgatgcctgggcct
ggatacccgagaccaggtgggatgccaccctccagccgtatgacaccacagggtccgccc
atggggcctccaggctacggctccagccccgtgtcccgaccaggaatgcctggcgtcatg
gatccctcccgtaagaggcctgcccctcagcaggtccagcaacagcgcaaccaacatacc
aagaagaagaagatggcggataagattttacctcagaggatccgggagctggtgccagag
tctcaggcctacatggacctgctggcgtttgagaggaagctggatcagaccatcatgagg
aaacgtctggacatccaggaggcactcaagagacccattaagcaaaagcgaaagcttcgt
atcttcatatccaacaccttcaaccctgccaagcccgacgcagaagacggagagggcact
gttgcatcatgggagctgcgtgtcgaagggcgtctgcttgaagatactgctgtgtccaag
tatgaagccaccaagcagaagagaaagttctcttccttcttcaagtctctggtcatcgag
ttggacaaggacctctatgggcctgacaatcacttggtcgagtggcacaggactgcgacc
actcaggagacagacgggttccaggtgaagaggccaggggatgtgggcgtacgctgcact
gtcctgctcatgctggactaccagccccctcagttcaagctggaccctcgcctggcccgt
atgttggggatccacacccagaccaggccggtcatcatccaggcactctggcagtatgtt
aagacccacaagctgcaggacccccacgagagagagttcatcaactgtgacaagtacctg
cagcagatctttgagactcagcgtatgaagttctctgagatcccacaacgcctccatgct
ctcctgatgcctccagaacctatcatcattaaccatgtcatcagtgtggatcccaacgac
cagaagaagacagcctgctatgacatcgatgtggaggtggacgacactctaaagacccag
atgaactccttcctcctatccaccgccagccagcaggagatagctggcctggacaacaag
atccatgagaccatagagacgatcaaccagctgaagacccagagagagttcatgttgagc
ttcgccagagacccccagggcttcatcaacgactggctgcaatcacagtgcagggatctc
aagactatgactgatgtggttgcgaacccagaagaggagaggagagcagagttctatttc
caaccctgggcccaggaggccgtgtgtcgttacttctactccaaggtccagcagaggagg
caggagctggaacaagccctgggaatcagaaacacttag
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