Oncorhynchus tshawytscha (Chinook salmon): 112246397
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Entry
112246397 CDS
T05605
Name
(RefSeq) protein sidekick-2-like
KO
K16353
protein sidekick
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112246397
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Other
112246397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
112246397
NCBI-ProteinID:
XP_042183006
LinkDB
All DBs
Position
LG01:87277010..87461499
Genome browser
AA seq
2194 aa
AA seq
DB search
MAEGSWPLEFKWIHNGTELTRFSQEYRYLIPSLDRSHAGFYQCIIRNRVGALLQRRTEVQ
VAFMGGFEEGERDQSVSQGEGAVVPAPRIRSFPQPQVTWFRDGRKIPPSSRIAITLDNTL
VILSTVAPDAGRYYVQAVNDKNGENKTSQPITLSVDNVGGPADPIAPTIIIPPTNTSVVS
GTSEVTMECVANARPLIKLSITWRKNRVLVTSGLSDFNRRLTIIGPVVSDSGFYECEVVL
RSSSVPSVNAGAYLHVQEPPQFVKEPEKHIIAEMEKVVDIPCQARGVPQPDIVWYKDAAP
ISPVKTPRYRVLVGGSLQVNGLLPDDTGMFQCFARNLAGEVQTNTYLAVTSIAPNITAGP
SDSTVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLESGSLLISPSHIS
DAGTYTCMASNSRGIDEAAADLVVWARTRINTPPQDQSVIKGTKATVTCGVTHDPSVTVR
YVWEKEGLVINAQSIPRIRLDPDGTLHISQTWSGDIGTYTCRVMSVGGNDSRSAHLRVRQ
LPYAPENPAALLSSSEKRAINLTWAKPFDGNSPLLRYILEVSENNAPWAILLANIEPEST
AVTVSGLIPARSYQFRLCAVNDVGKGQFSKETDRVSLPEEPPSAPPQNVIASGRTNQSIM
IQWQPPPESHQNGVLRGYSVRYRLTGLPVDYQSKNISKPDVTNILLEDLIIWTNYEIEVA
AYNRAGLGTFSHKVTEWTLQGVPTIAPSKVQVEAVNSTTIRITWAAPNPQFINGINQGYK
LLAWEPGQEEEVTMVTVRPNFQDSVHVGYVTGLKKFTEYYSSVLCFTTPGDGPRSPANGL
RTHEDTPGAVGDLSFTEILDTSLKVSWREPEEKNGVLTGYRISWEEFNRTNTRVTHYLPN
VTLQYRVTGLTALTTYTIEVAGMTSKGQGKLSSSTISSGVPPELPGPPTNMAISNIGPRS
ITLQFKPGYDGKTSISRWQVEAQVSVIGDNEDWVIVHQLPNEPDARSLEVPGLNPYTFYR
FRMRQVNIVGTSPPSQPSRKIQTLQARPDMFPANVTLRTASETSLWLRWVPLPEWEYNGD
PEVVGYRVQYSRTGSQGRALTHVIADRLEREFTIEDLEEWTEYDVRVQALNGIGAGPWSQ
PVRGRTRESVPSCGPTNVSAFATTSSSILVRWFEVPEPDRNGLILGYKVLYREKDSDSSL
QLWTVDGNASHSVQLTGLGKYVLYEIQVLAFTRIGDGMPSSPLILERTLDDVPGPPVGIL
FPEVRTTSVRLIWQSPSQPNGIILAYQITYRLNSTNSNTATVDVLNPSARQYMVTGLKQE
SVYVFRITAQTRKGWGEAAEALVVTTEKRARPQPTGRPMVPQENVQARSVLLSWEPGSDG
LSPVRYYTVQLRELPDSNWTVHSASVNHESSFYIVGRLKPFISYQFRVKATNDIGDSEYS
EESEVITTLQDAPDEAPTILSVTPHTTTSVLIRWQHPSEEKINGILLGFRIRYRELMYDR
LRSVSVRTANSPSNTWTELNSPYSVRNLSESSLTQYELDNLSKHKRYEIRMSVYNAVGEG
PTSTPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWEPPPLDSQNGDIQGYKVYFWEIQH
KNETERLRTLFLPEGGVKLKNLTGYTTYMISVALFNAAGDGPRSPPTRGRTQQAAPSAPS
FIHFSELTTTSVNVSWGEPTYPNGILEGYRLVYEPCTPVDESSVACADCLHSPSPPGVSK
IVTVDVKGAPFWMKIKDLADGVTYNFRIRAKTFIYGPEVEANITMGPGEGAPGPPGEPFI
SRYGSALTIHWSNGDPGSSPITHYVIEARPSDEGLWDILIKDIPKEVTSYAFNMDILKQG
VSYDFRVIGVNDYGYGSPSPPSASISAKKVAPFYEEWWFLVVVALVGLIFILLLVFILII
RGQSKKYAKKSDSGNNSNCNALTHGDMVSLDEGRFPALELNNRRLSVKNSFCRKNGVYTR
SPPRPSPGSLNYSDEDLSTTKYNDLIPAESSSLTEKPSEISDSKEALVFSYGTGGLRVLP
LNWGSDSEYEVDQHRQKTHSFVSHYISDPTYYNSWRRQQKGISRAQAYNYTESESGDPEP
CAPSPPLPPLPPQLTSTTPLPQTQTQPHGQPQGLTPQGQGSLFRPKGSRTPTPSQQLSNS
TPPSHSNTLSYWPPSSPSPAPGSRAPIAGFSSFV
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggggagctggcccctggagttcaaatggatccacaatggcactgagctcaca
cgtttctcacaggagtacaggtacttgattccctccctggaccgttcccatgctggcttc
taccaatgtatcatcaggaaccgtgttggagccttactacagaggaggactgaagtgcag
gttgcatttatgggcggttttgaggagggtgagcgcgaccagtcggtctctcagggggag
ggggcagtggttcccgctccacgcatcaggagctttccccagccgcaggtcacatggttc
agagacggacgcaagataccacccagcagccgcatagccattactctggacaacactctg
gtcatcctgtccacggtggcccctgatgctggacgttactacgtacaggctgtcaacgac
aagaacggcgaaaacaagaccagccaacccataaccctttctgtcgacaatgttggtggg
cctgcagaccccattgcccccaccataatcatccccccaacaaacaccagtgtagtgtca
ggcacgtctgaagtcaccatggagtgtgtcgcgaacgcaagaccactgatcaaactcagc
atcacatggaggaagaacagggttctggtcaccagtggtctgagtgacttcaaccgcaga
ctgaccattatcggccctgtggtcagtgactcagggttctatgaatgtgaggtggtcctc
cgcagcagcagtgtgccttctgtcaatgctggggcctaccttcatgttcaagagcctccc
cagtttgtgaaggaaccagagaaacacatcattgctgagatggagaaagtggtggatatc
ccctgtcaggcacgaggtgtgcctcaaccagacattgtgtggtataaggatgcggcgccc
atcagcccagtgaaaacccccaggtatagggtgttagtggggggcagtttgcaggtcaac
ggccttcttcctgacgacacagggatgttccaatgctttgcacggaacctggcaggagag
gtgcagaccaacacctacctggctgtcactagcatcgcccctaacatcacagctggacca
tctgacagcacggtgattgacggcatgtcagtcattctccactgtgaaacatcaggagca
ccaagaccagctatcacctggcagaaaggtgagcgtgttctggccagtggttctgttcag
ctgcccaggttcaccttgctggagtcaggcagcctgctcatctccccatcccacatatca
gacgctggcacctacacctgcatggccagcaactcccggggcatagacgaggctgctgct
gaccttgtggtgtgggctcgcacccgtatcaacaccccccctcaggaccagagtgtcatc
aaaggcaccaaggccactgtgacctgtggagttacacacgaccccagtgtcacggtcagg
tatgtgtgggagaaggagggcttggtcatcaacgcccagtctatccctcgtatccgactg
gacccggatggtaccctccacatctcccagacctggtcaggtgacatcgggacctacacc
tgtagggttatgtcggtaggaggcaacgactcacgcagcgcacacctccgagtcagacag
ctgccctatgctccagagaaccctgcggccctgctaagttcctcagaaaagagggccatt
aacctgacctgggccaagcccttcgacgggaacagccccctgcttcgctacatcctggag
gtctctgagaacaacgctccctgggctatcctcctggccaacatagagcctgagtcgaca
gcagtgaccgtcagtggactcatcccagcacgctcctaccagttccgcctgtgtgccgtc
aacgacgtgggcaagggccagttcagcaaggagactgaccgtgtatctctaccagaggaa
cctcccagtgcccctccccagaatgtgatcgccagcggccgcaccaaccagtccatcatg
atccagtggcagcccccaccagagagccaccagaacggggttctcaggggctacagcgtc
cggtatcgtctaacaggtcttccagtggactaccagagtaagaacatctccaaacccgac
gttaccaacattctcctggaggacctgatcatctggaccaactatgagatagaggtggca
gcctacaacagggcggggctaggaaccttcagccacaaggtcactgagtggacgctgcag
ggagtgccgactatagcccccagtaaagttcaggtggaggccgtcaattccacgaccatc
cgtatcacctgggccgcccctaaccctcagtttatcaacgggatcaaccagggatacaag
ctgttggcatgggagccaggtcaggaagaggaggtcaccatggttacagtgagacctaac
ttccaggacagtgtgcatgtgggctatgtgacggggctgaagaagttcacagagtactac
agctctgtgctgtgtttcactacgcctggagacggcccccgcagccccgccaacggcctg
aggacacatgaagacactcctggggcggtgggtgacctgagcttcacagagatcctcgac
acgtctctcaaagtgagctggagagaacctgaagagaagaacggagtcctcacagggtac
cgtatctcatgggaggagtttaaccgcaccaacacacgggtgacccactacctccccaac
gtgaccctgcagtaccgcgtcacagggctgactgccctcaccacctacaccatcgaggtg
gccggcatgacctccaagggccagggaaaactgtcctcctccacaatctcttctggagta
cctccagagctgcctggtcctcccaccaacatggccatctccaacattggccctcgatcc
atcactctccagttcaaacccggctacgatggaaagacctccatctctcgctggcaggta
gaggcccaggtcagtgtgataggagacaatgaggactgggtgattgttcaccagctgccc
aacgagcctgatgcccgatccctggaggtgccaggactaaacccatacacattttacagg
ttccgtatgcgtcaggtgaacattgtggggactagtcctcccagtcagccctccaggaag
atccagaccttgcaggcccgtccagatatgttccccgctaacgtcaccctgcgcacggcc
agcgagaccagtctgtggctccgatgggtgcccctaccagagtgggagtacaatggggac
ccagaggtggtgggctaccgggtccagtactcccgcacaggctcccagggtagggcgctg
acccatgtgatcgctgaccggctggagagggagttcaccatcgaggacctggaggagtgg
acagagtatgatgtcagggttcaggctctcaatggcattggggccgggccctggagccag
cctgtcagaggaaggaccagggagtctgtcccctcctgtggccccaccaacgtgtcagcc
tttgccacaacctccagcagtatcctggtgcgctggtttgaagtaccagaaccagaccgg
aatgggctgatcttgggatacaaggtgttgtatagggagaaggactctgactcttccctc
cagttgtggacagtggatgggaacgccagccacagtgtccagctgactggtctggggaaa
tacgtcctctatgagatccaggtcctggccttcacccgcatcggagacggcatgcccagc
tcaccactcatactggagagaactctggacgacgtgcccggccctccagtgggcatcctg
ttccctgaggtccggaccacctcggtgcgtctcatctggcagtccccgtcccagcctaat
ggtatcatcctggcctatcagatcacgtatcgtctgaactcgaccaatagcaacacggcc
acagtggacgtcttaaacccgagtgctcgccagtacatggtgactggcctgaaacaagag
tcagtgtacgtgttccgcatcacagcccagacacgcaagggctggggggaggctgcagag
gcactggtggtcactaccgagaagagagctcgccctcagcccaccgggcgtcccatggtg
ccccaagagaatgttcaggcccgcagcgtgttgttgtcatgggaaccaggcagcgatggc
ctctctccggtccgctactacaccgtgcagctgagagaactgcccgacagcaactggacc
gtccactctgcctcggtcaaccacgagtctagcttctacatagttggcaggctgaagccc
ttcatctcctaccagtttagagtgaaagccaccaacgacataggagacagtgaatacagc
gaggagagtgaagttatcaccacactacaggacgcccctgacgaagcccccacaatcctc
tctgtcacaccacacacaactacatccgtgctgattcgctggcagcatccgtctgaggag
aagattaacggtatcctcctgggtttccggatacgataccgggagctcatgtacgaccgc
ctccgcagcgtctccgtacgcaccgccaacagcccctccaatacatggaccgagctcaac
tccccctacagcgtgagaaacctgagcgagtcctctctcacccagtatgagctggataac
ctgagcaaacacaagcgctatgagatcaggatgagtgtgtataacgccgtgggggaggga
ccaaccagcacaccacaggaagtgtttgtaggagaagcagtacccaccgccccacctcag
aacgtggccatccaatcagcaacggccacccagctggacgtgacgtgggagcctcctcca
ttggactctcagaacggagacatccagggatacaaggtgtacttctgggagatccagcac
aagaatgagacggagagactgcgcacccttttcctgccagagggaggggtcaagctgaag
aacctgactggatacaccacctacatgatcagtgtggccctcttcaacgcagcaggggac
gggccccgaagcccaccaaccaggggccgtacacaacaggctgcccccagcgctcccagc
ttcatccacttcagtgagctgactaccacgtcagtcaacgtgtcctggggtgagcccacc
taccccaacggcattctagagggctaccggctggtctacgagccctgcacccctgttgac
gaatcttccgtggcctgtgccgactgtcttcactccccctcccccccaggcgtcagtaag
atagtgacggtggacgtcaaaggggccccgttctggatgaagatcaaggacctggctgac
ggggtgacctacaacttcaggatccgggccaagacgttcatatacgggcctgaggtggag
gctaacatcaccatggggcctggggaaggagccccgggcccccctggagagcctttcatc
tctcggtacggctcagctcttaccatccactggtccaacggtgaccccgggagttcgcct
atcacacactacgtcatcgaggccagaccttcagatgagggcttgtgggatatcttgatc
aaggacatcccaaaggaagtgacgtcatacgccttcaacatggacattctgaagcaaggg
gttagttatgacttccgggttattggcgtgaacgactatggctacgggtctcctagtcca
ccctcagcctccatatctgccaaaaaggtggcgccattctacgaggagtggtggttcttg
gtggtggtggccctggtaggtcttatcttcatcctccttctggtcttcatcctcatcatc
agaggacagagcaagaagtacgccaagaaatctgactcagggaacaactccaactgtaat
gccctgacccatggagatatggtcagcctggacgagggacgcttccccgccctggaactc
aacaaccgacggctgtccgtcaagaactccttctgccgtaagaacggtgtctataccagg
tctcctcctcggcccagcccaggcagtctcaactactctgacgaggatttgagcaccacc
aagtacaacgatctgatcccagctgagagcagcagcctgacagagaaaccatctgagata
tcagactctaaggaggccctggtgttctcatatgggacgggtggtctgcgtgtgcttcca
ctgaactggggcagtgacagtgagtacgaagtggaccagcacagacagaagacacactcc
tttgtgagccactacatcagtgaccccacctactacaactcctggcgccgccagcagaag
ggcatctcccgggcacaggcctacaattatacagaatcagagtcgggtgacccggagccc
tgcgccccgtcaccacccctgcccccgctaccaccccagctcacctccaccacccctcta
ccccagacccagacccagccccatggtcaaccacagggcctcacaccccagggccagggt
agtctgttcaggcctaaaggcagccggactcccaccccctctcagcagctctccaactcc
acccctcctagccactccaacaccctgtcctactggccacccagcagccccagcccagcc
cctggatctcgggcccccatcgccgggttctcctcattcgtttga
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