Oncorhynchus tshawytscha (Chinook salmon): 112246434
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Entry
112246434 CDS
T05605
Name
(RefSeq) rab11 family-interacting protein 5 isoform X2
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112246434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112246434
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112246434
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
MIC19_MIC25
Motif
Other DBs
NCBI-GeneID:
112246434
NCBI-ProteinID:
XP_024270516
LinkDB
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Position
LG09:62245415..62287235
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AA seq
649 aa
AA seq
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MMSLIELNDDQRWVPTHVNVTVLRARGLRTKGKHGSRYVYTIIQVGKEKYTTGLVEKATV
PEWNEECCFELLPGILEAGSRSAFPSGSGDLVLTVMHRVLIGLDVFLGQAIVPLDKIFQD
GMCPRDEWLKLNSKASRKEKERGEIQVTVQFTRNNMTASMFDLTMKDKPRSTFGKLKDRV
TGRKRGDMESSSAIVPGRFAALSSSLGQPFGEGSGGGEDPGEVEVAEEKRSKVKDFFLGK
GKLRRSSDTRSCSSLASESSVSSTTSESHCPPSLGLGLLVDPPSSPIYSSKVKDTHHGDT
VLAKKVLTTTQSSPKILTHKRAFSDEASRITTTAIPRPCPAVESLKGQGMTLSQSSLCIN
GSHVYGSEPVGPKGSSTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSAGEGRRWSFDKVK
KDEKVEEKEAETPVSQFQSARVGGRPVQAAAPMLSSTTTVDSADKGKKLRKTLFSGGRSD
SLPAKSELSQASPPPEGRLRGWFGSSDSQNKPSPHPVKPLTTTASQGEKKEGRSVLEKLK
SSIHPGRSAQQTLAVAETEKKIEESLADSSAQYEQLTNMELISLLLQQEMDMEKQQVASD
QQAVMLEKHEAELKKIKAQVRDLEDYIDKLLVQIMEQTPTLLQVRSRHK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcacttatagagttgaacgatgaccagagatgggtgcctacacatgtgaatgtc
actgtccttcgtgcaaggggtttgcggacgaagggcaagcacgggagccgttatgtttac
accatcattcaggttgggaaggagaaatacaccaccggtttggtcgaaaaggcgactgtg
ccagagtggaatgaggaatgttgtttcgaacttctccctggaatactggaggctgggagt
cgcagtgcatttccttcagggagcggcgacttggtcctcaccgtcatgcaccgggtgctt
atcggacttgacgtgtttcttggtcaagcaatcgtccccctggataaaatatttcaagat
ggaatgtgtcctagagatgaatggctcaaactcaactccaaggccagccggaaggagaag
gagcgtggcgagatacaggtaacggtccagttcacacgcaacaacatgacagccagcatg
ttcgaccttaccatgaaggacaagccgcgctctaccttcggcaaactcaaggaccgcgtg
acggggaggaagaggggcgacatggagtcctcctcggctattgtgccgggacgcttcgct
gccctgtcgagttccctggggcaaccattcggggaggggagcggagggggagaggacccc
ggggaggtagaggtagccgaggagaagcggagcaaggtgaaggattttttcctgggtaag
ggaaagctgcggaggtcttctgacacgaggtcgtgttcgtcgctggcctcagaaagcagc
gtgtcgtccacgaccagtgaaagccactgtcccccttctctgggtctaggcctcctggtg
gacccccccagctctcccatctacagcagcaaggtcaaagacacccaccacggagataca
gtcctagctaaaaaagtgcttaccaccacacagtcttccccaaagatactgacccacaag
cgagccttcagcgacgaggcgagtaggatcaccacgactgccattccccggccctgtcct
gctgtggagtccctcaagggtcaaggtatgactctctcccaatcctctctgtgcatcaac
ggaagccacgtctatggatctgaaccggtgggtcccaagggctcaagcacccttccatcc
aagctggtcctgctcgagaagtgctcccctctctctcgttcgctgcagaacctcacaaag
cggagcgaggacaagggttccgccggcgagggccggcgctggtccttcgacaaggtaaag
aaagatgagaaggttgaggagaaggaggccgaaactccagtctcccagtttcaaagtgct
cgggtggggggtcggccggtgcaggcagcagccccgatgctgtcttctactaccacggtg
gactcagcagacaaagggaagaagctcagaaaaactttattctccggagggaggagtgat
tctctacctgccaagtccgagctgagccaggcttctcctccccctgaggggagactgcga
ggctggtttggctccagtgactcccagaacaagccaagcccccacccagtgaagcccttg
accaccacagccagtcagggggagaagaaagagggccggtcagttctggagaagctcaag
tcttccatccacccaggccgctctgcccagcagacactggccgtggctgagactgagaag
aagattgaggaatcgttagcagacagctctgcccagtatgagcagctgacaaacatggag
ctgatttcccttctgctgcagcaggagatggatatggagaagcagcaggtggcctctgac
cagcaggcggtgatgctggagaaacacgaggcggagctgaagaagatcaaggcacaggtg
cgcgacctagaggactacatcgacaagctgctggtgcagatcatggagcagacacccaca
ctcctccaagtgcgctcccggcacaagtga
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