Oncorhynchus tshawytscha (Chinook salmon): 112246540
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Entry
112246540 CDS
T05605
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112246540 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112246540 (pex5)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112246540 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_16
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_12
TPR_7
TPR_Slam
TPR_20
ANAPC3
TPR_9
TPR_10
MAS20
Connexin50
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
112246540
NCBI-ProteinID:
XP_042168899
LinkDB
All DBs
Position
LG03:25591246..25607789
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AA seq
678 aa
AA seq
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MAMRELVEGECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVNEFMQQA
PPRPPHSFDMGQLLEEMQQIDQQSYRQAPQRAPGVAALALSGDWTSEFLSGADAAAAASS
GQAGLGDPADADWTREFITDGTDPGRWAEEYLEQSEEKLWLGDLGEREQDWTKEYLPGDE
LKQTANELVAKVNDPKLQNTEFLRFIRQIGEGSVTVEDRAGKQHTDRAQAKEAQNWASNL
NQFLEETGGGTLPSTTQEWDQKIAKAKAKQAHQWASVVKQVSVESAESWVDEFATAGPDF
QQAKAAVESDLDFWEKLQQEWEEMAKRDAESHPWLSDFDQMLSSSYDKGYQFEEDNPYMS
HQDPLAEGVRRMEAGDIPGAVRLFESAVQREPDNQLAWQYLGTCQAENEQEFAAISALRR
CIELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNPAYRPVLEQSEREREKDGGTR
ERERFGSLLPDSLFTEVQSLFLSAANSDPARVDPQLQCGLGVLFNLSGEYDKAVDCFTAA
LSVTPQDYLLWNKLGATLANGSRSEEAVAAYRRALELQPGFIRSRYNLGISCVNLGAHRE
AVEHFLEALSLQRQASGEGETVSASRAPGGAAATMMSDNIWSTLRMALSMMGESSLYAAA
DRRDLDTLLSYFCQREGE
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagttggtggagggagagtgcgggggagccaatcctctcatgaagctg
acgggtcatatgacccaggagggaggagcttggaggcacaggtcaacgcccactattccc
cctacacccattgaaatagcaacagaagaagagttggtgaatgagttcatgcagcaggcg
cctccacggccccctcacagcttcgacatgggccagttactggaggaaatgcagcagatt
gatcagcagagctacagacaggctccacagagagctccgggtgtggctgcgttggccctg
tctggtgattggacgtctgagtttctgtcgggagcagatgccgctgccgccgcctcatcg
gggcaggcgggacttggagacccggccgacgctgattggaccagagagtttatcaccgat
ggcacagatcccgggcgttgggcagaggagtatctggagcagtcagaggagaagctatgg
ctcggagacctgggagagagggagcaagactggacgaaagagtacctaccaggagacgaa
ctgaagcaaacagccaatgagctggtcgcaaaggtcaatgaccccaagttacagaacact
gagttcctgcggttcattaggcagattggcgagggcagtgtcacagtggaggacagagca
ggcaaacagcacacagatagagctcaggccaaggaggctcagaactgggcctccaacctc
aaccagttcctggaggagactgggggagggactttaccctcgacaacccaagagtgggat
cagaagattgccaaagctaaggctaaacaggcacatcaatgggcttctgtcgtcaagcag
gtctcagtggagtcagcagaatcatgggtagatgagtttgccactgcaggtccagatttc
cagcaagctaaagctgctgtggagagcgacttggacttctgggagaagctgcagcaggag
tgggaggagatggccaagagagatgcagaaagtcacccctggctctccgattttgaccag
atgctcagtagctcctacgacaaggggtaccagtttgaggaggacaacccgtacatgtcc
caccaggacccccttgctgagggggtgaggaggatggaggcaggggacatccctggggcc
gtgcgcctgtttgagagcgccgtacagagagaaccagacaaccagctggcatggcaatat
ctgggaacctgtcaggcagagaatgaacaagagtttgcagccatcagtgccctccgcaga
tgcatagagttgaagaaggacaacctgacagctctgatggcactggccgtcagtttcacc
aacgaatcgctgcacaggcaggcctgtgagacccttcgcgactggctgaggcacaacccc
gcgtacaggccagtcctggagcagagtgaacgagagcgagagaaggacggcgggaccaga
gagcgggagagatttggctcactgctgccagattctttgtttacagaggtgcagtccctg
ttcctcagtgcggcgaactctgaccccgcccgcgtcgacccccagctacagtgtggcctg
ggagtcctcttcaatctgagcggggagtatgacaaggccgtggactgtttcacagcagcc
ctctctgtcacaccacaggactacctgctgtggaataaactgggcgctaccctggccaat
ggaagccgctcagaggaggctgttgcagcctacaggagggcgctggaactgcagccaggc
ttcatccgcagtcggtacaacctgggaatcagctgtgtcaacctaggagcccacagagag
gccgtggagcacttcctggaagccctgtccctgcagcggcaggcatcgggggagggcgag
acggtcagtgccagccgggccccagggggtgccgcggccaccatgatgtctgacaacatc
tggtccaccctgcgcatggccttaagcatgatgggagagagctcgctatacgcggcggct
gaccggcgagacctcgacacgctgctctcctacttctgtcagagggagggggaatga
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