Oncorhynchus tshawytscha (Chinook salmon): 112246560
Help
Entry
112246560 CDS
T05605
Name
(RefSeq) calsyntenin-3-like isoform X1
KO
K22661
calsyntenin 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112246560
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Cadherin related
112246560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
112246560
NCBI-ProteinID:
XP_042168870
LinkDB
All DBs
Position
LG03:25553654..25590010
Genome browser
AA seq
960 aa
AA seq
DB search
MDRMSCLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSSSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDHIVRVEALDADCS
PQYSQICFYDIITPNVPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAM
VPDSIAAAVSGDHFTLQLWMRRGGINTQPPTNQARGNRREEETIVCSTVKNGQSNDDSFS
HYSLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTF
DPALIHDNGAIPNPAPRQRLVIGACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGV
TVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAV
QQVTYRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGP
HLARPAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPL
GEELNPEREELLVDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSAR
FERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGH
TLPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGTGGGSKEDSGQWDD
SALTIIVNPMESYESRMGISADTEGEGEEDEEVVESPDDANDDQRIIIKKEGRDGNPRRY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagttgtctctccttcctcctcctttgcttgacttcggttgccaatggc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggtattgtcatggag
aacgacaacaccgttcttctcaacccaccactgttcgccctggataaagacgctccactg
cactacgcaggtgagatctgtggcttccgggtgcacaatgggccctcgggatccagttcg
gtccagtttgaggcggtggttctggaccgctcgacaggggagggcctggtccgctctaaa
gagccattggactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgt
ggagagggccccgatggagccaacagcaagaagtcccacaaggccacggtgcatgtacgt
gtgaacgacgtaaacgagttctccccagtgttcgtggagcgtcgctacgaggcctccgtc
ccagaaggccgtctgttcgaccacatcgtgcgcgttgaggccctcgacgcagactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccaacgttccctttgtcatc
gataacgatggtaacattaagaacacagagccattggattcgaagcgccagcgtgtccac
accttctgggtgaccgcgttcgactgtggcaagaaccgagctcaggccgacgcccaggtc
gtcgtcacggtcaaaccatcctgcaaacccggctggatcggctggtcgaagcgggtggag
tatacccccgggtcaggcagcattcccctgttccccagtttgcacctggaaacctgcgaa
gagactgtgtggaacatccaggccaccgtagagctgcagactggccatattgggaagggc
tgtgacagggacagctactcagaccgatcagtgcgcagactctgtggtgctgtgagaggt
gaagtggacttactcccgcccccgtccccagcagccaattggacctcagccttgcccacc
ctcccttcttctgattcatccctggtgttctccttcaatggctccacccatgttgccatg
gtacccgactctattgccgcagccgtatctggagaccatttcaccctccagctgtggatg
agaaggggtgggatcaacacccagcctccgactaatcaggccagaggaaaccgcagggag
gaggagactatcgtctgcagtaccgtcaagaatggtcagtcaaatgacgactccttctcc
cactactctctctctgttcacggctgccgtctatctcttttctactggcccgacgtctcc
gctgcgcggcccgtaaaattcctctggaaactggagcaggtgtgtgacagtgaatggcat
cacctgtccctcagtgtccagttcccctctgtgacactgtacgtggacggagtcaccttc
gaccccgccctcatccacgacaacggagccatacccaaccctgccccacgacagcgactg
gtcataggcgcctgctgggagacagaagataaacagaaggacatccttaacaacaccatc
cctgaggggaaagacacagggaagtatgtgggtggctaccgtggcctgttgtcaggggtg
acggtgcggccagggagtgtggagcctcacagtgtggtggagtgtctgtacgcctgcagg
gaggggctggactttggggacttggagaccttgggctcaggcatgaaggtgcatgtgaac
cccagtcagtctgtgctggttctagagggtgatgacattgagagcttcaacagggccgtg
caacaggtcacctacaggaactctctccgcttcgccacccctggagtcaggccactcaaa
ctgaccacctcactcaggtgtttcaatgaggagagttgtcttacgctcaggcagttggag
ggctacctggtggtccttcagcccgatgcccctcagatctccctgtctggggtcggcccc
cacctggcccgccccgcgcctgaatttgagggcccccgtggtgtacccctcttcccagag
ctgaggatcgtgtgctccctgtctcatgctgttaacacagccgctcagggcatggaggga
ggagctctgatgtcagacgccgtggcccacactctggacggctgtgaggtccagcccctg
ggggaggagctaaacccagagagggaggagctcctggtggacatggatgccctgagagag
aggggtctggagataatcaacaccactgcttacatcgccatcacaggagctgagtccatc
tccgtgtatgaggatgtccttcggtccgtccgttaccggctggctaaaggctcggcccgc
tttgagaggcggttccgtctgtcctgctccgagatgaatggcagatacaccagcaacgag
ctcacactggaggtgaacttcctgcactccctggacagtctgtaccacccgtctcacctc
ctggcctcccagcagcagtttcttcacccatctcaccactctggggagctgagtggacac
accctgcctaacccccaccgcaactcggtggtgccaggagcggccacagtcatcatcatg
gtgtgcgtgggcttcctggttgtcatggtgatcctgggagtgtttcgaatccgctccatc
caccgccgtggcgagggcaccgggggagggtctaaggaggatagcggccaatgggatgac
tctgccctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggcatctca
gctgacaccgaaggtgagggggaggaggacgaggaagtggtggagtcacccgatgacgcc
aacgacgaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgtcgctac
taa
DBGET
integrated database retrieval system
